BLASTX nr result

ID: Coptis24_contig00018912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018912
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK68839.1| Unknown protein [Arabidopsis thaliana] gi|3171179...   213   2e-53
ref|NP_200298.1| uncharacterized protein [Arabidopsis thaliana] ...   213   2e-53
ref|XP_002864361.1| hypothetical protein ARALYDRAFT_331828 [Arab...   212   3e-53
ref|XP_002522970.1| conserved hypothetical protein [Ricinus comm...   212   3e-53
ref|XP_002316997.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53

>gb|AAK68839.1| Unknown protein [Arabidopsis thaliana] gi|31711798|gb|AAP68255.1|
           At5g54870 [Arabidopsis thaliana]
          Length = 318

 Score =  213 bits (541), Expect = 2e-53
 Identities = 94/125 (75%), Positives = 104/125 (83%)
 Frame = +1

Query: 1   WKGACFYNTTAWMEFHNKSGSEYGGGTLHIKTAKAHSWTCMDLYIFATPYRVTWDYYFLG 180
           WKGACF+  TAW+EFHNKSGSE+GGGTLHIK  KAHSWTCMDLY+FATPYRVTW +YF+ 
Sbjct: 81  WKGACFFENTAWLEFHNKSGSEFGGGTLHIKADKAHSWTCMDLYVFATPYRVTWTWYFIS 140

Query: 181 RQHTLXXXXXXXXXXXXXVKNKGVSIFLMESGMLGTLQALWDVFPLFSNTGWGEGSNIAF 360
           RQHT+             VKNKGVSIFLM +GMLGTLQALWDVFPLFSNTGWGE SN+AF
Sbjct: 141 RQHTVEFPEWDGKAEYEYVKNKGVSIFLMHAGMLGTLQALWDVFPLFSNTGWGESSNLAF 200

Query: 361 LKKHM 375
           L+KHM
Sbjct: 201 LEKHM 205


>ref|NP_200298.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758267|dbj|BAB08766.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009168|gb|AED96551.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 531

 Score =  213 bits (541), Expect = 2e-53
 Identities = 94/125 (75%), Positives = 104/125 (83%)
 Frame = +1

Query: 1   WKGACFYNTTAWMEFHNKSGSEYGGGTLHIKTAKAHSWTCMDLYIFATPYRVTWDYYFLG 180
           WKGACF+  TAW+EFHNKSGSE+GGGTLHIK  KAHSWTCMDLY+FATPYRVTW +YF+ 
Sbjct: 81  WKGACFFENTAWLEFHNKSGSEFGGGTLHIKADKAHSWTCMDLYVFATPYRVTWTWYFIS 140

Query: 181 RQHTLXXXXXXXXXXXXXVKNKGVSIFLMESGMLGTLQALWDVFPLFSNTGWGEGSNIAF 360
           RQHT+             VKNKGVSIFLM +GMLGTLQALWDVFPLFSNTGWGE SN+AF
Sbjct: 141 RQHTVEFPEWDGKAEYEYVKNKGVSIFLMHAGMLGTLQALWDVFPLFSNTGWGESSNLAF 200

Query: 361 LKKHM 375
           L+KHM
Sbjct: 201 LEKHM 205


>ref|XP_002864361.1| hypothetical protein ARALYDRAFT_331828 [Arabidopsis lyrata subsp.
           lyrata] gi|297310196|gb|EFH40620.1| hypothetical protein
           ARALYDRAFT_331828 [Arabidopsis lyrata subsp. lyrata]
          Length = 529

 Score =  212 bits (539), Expect = 3e-53
 Identities = 93/125 (74%), Positives = 105/125 (84%)
 Frame = +1

Query: 1   WKGACFYNTTAWMEFHNKSGSEYGGGTLHIKTAKAHSWTCMDLYIFATPYRVTWDYYFLG 180
           WKGACFY+ TAW+EFHNKSGSE+GGGTLHIK  KAHSWTCMDLY+FATPYRVTW +YF+ 
Sbjct: 79  WKGACFYDNTAWLEFHNKSGSEFGGGTLHIKADKAHSWTCMDLYVFATPYRVTWTWYFIS 138

Query: 181 RQHTLXXXXXXXXXXXXXVKNKGVSIFLMESGMLGTLQALWDVFPLFSNTGWGEGSNIAF 360
           RQHT+             VKN+GVSIFLM +GMLGTLQALWDVFPLF+NTGWGE SN+AF
Sbjct: 139 RQHTVEFPEWDGRAEYEYVKNQGVSIFLMHAGMLGTLQALWDVFPLFTNTGWGESSNLAF 198

Query: 361 LKKHM 375
           L+KHM
Sbjct: 199 LEKHM 203


>ref|XP_002522970.1| conserved hypothetical protein [Ricinus communis]
           gi|223537782|gb|EEF39400.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 524

 Score =  212 bits (539), Expect = 3e-53
 Identities = 93/125 (74%), Positives = 104/125 (83%)
 Frame = +1

Query: 1   WKGACFYNTTAWMEFHNKSGSEYGGGTLHIKTAKAHSWTCMDLYIFATPYRVTWDYYFLG 180
           WKGACFY  TAWMEFHNK+GS++GGGTLHIK + AHSWTCMDLY+FATPYRVTWDYYFL 
Sbjct: 74  WKGACFYKNTAWMEFHNKTGSQFGGGTLHIKISNAHSWTCMDLYVFATPYRVTWDYYFLS 133

Query: 181 RQHTLXXXXXXXXXXXXXVKNKGVSIFLMESGMLGTLQALWDVFPLFSNTGWGEGSNIAF 360
            +HTL             VKN+GVSIFLM++GMLGTLQALWDVFPLF+NTGWGE SNI F
Sbjct: 134 WEHTLEFKEWEGKAEYEYVKNRGVSIFLMQAGMLGTLQALWDVFPLFTNTGWGENSNIGF 193

Query: 361 LKKHM 375
           L+KHM
Sbjct: 194 LEKHM 198


>ref|XP_002316997.1| predicted protein [Populus trichocarpa] gi|222860062|gb|EEE97609.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score =  211 bits (538), Expect = 4e-53
 Identities = 92/125 (73%), Positives = 103/125 (82%)
 Frame = +1

Query: 1   WKGACFYNTTAWMEFHNKSGSEYGGGTLHIKTAKAHSWTCMDLYIFATPYRVTWDYYFLG 180
           WKGACFY   AWMEFHNK+GSE+GGGTLH+K +KAHSWTCMD+Y+FATPYRVTWDYYFL 
Sbjct: 76  WKGACFYENRAWMEFHNKTGSEFGGGTLHLKVSKAHSWTCMDIYVFATPYRVTWDYYFLS 135

Query: 181 RQHTLXXXXXXXXXXXXXVKNKGVSIFLMESGMLGTLQALWDVFPLFSNTGWGEGSNIAF 360
           R+HTL             VK +GVSIFLM++GMLGTL ALWDVFPLF+NTGWGE SNI F
Sbjct: 136 REHTLEFKEWDSKAEYEYVKRQGVSIFLMQAGMLGTLSALWDVFPLFTNTGWGENSNIGF 195

Query: 361 LKKHM 375
           LKKHM
Sbjct: 196 LKKHM 200


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