BLASTX nr result

ID: Coptis24_contig00018909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018909
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139526.1| PREDICTED: ABC transporter I family member 2...   180   9e-44
ref|XP_003633613.1| PREDICTED: ABC transporter I family member 2...   179   2e-43
ref|XP_002281168.1| PREDICTED: ABC transporter I family member 2...   179   2e-43
emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]   179   2e-43
gb|ADE77121.1| unknown [Picea sitchensis]                             176   2e-42

>ref|XP_004139526.1| PREDICTED: ABC transporter I family member 20-like [Cucumis
           sativus] gi|449518083|ref|XP_004166073.1| PREDICTED: ABC
           transporter I family member 20-like [Cucumis sativus]
          Length = 326

 Score =  180 bits (457), Expect = 9e-44
 Identities = 86/98 (87%), Positives = 90/98 (91%)
 Frame = +3

Query: 114 TIVIDNLRFTYPGIDGHPPPGSTPLIENFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 293
           TIVID LRFTYPGIDGHPP GS PLIENFSL+LNAG+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 7   TIVIDRLRFTYPGIDGHPPSGSKPLIENFSLTLNAGDRCLLVGSNGAGKTTILKILGGKH 66

Query: 294 MVDPHMVRVFGRSAFHHTALISSGVLCYLGGEWRRDVA 407
           MV+PHMVRV GRSAFH TAL  SG LCYLGGEWRRD+A
Sbjct: 67  MVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDMA 104


>ref|XP_003633613.1| PREDICTED: ABC transporter I family member 20 isoform 2 [Vitis
           vinifera]
          Length = 343

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/98 (85%), Positives = 92/98 (93%)
 Frame = +3

Query: 114 TIVIDNLRFTYPGIDGHPPPGSTPLIENFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 293
           T+ I+NLRFTYPGIDG PPPGSTPLI++FSL+LN+G+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 10  TVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKH 69

Query: 294 MVDPHMVRVFGRSAFHHTALISSGVLCYLGGEWRRDVA 407
           MV+PHMVRV GRSAFH TAL SSG LCYLGGEWRRDVA
Sbjct: 70  MVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVA 107


>ref|XP_002281168.1| PREDICTED: ABC transporter I family member 20 isoform 1 [Vitis
           vinifera] gi|296089817|emb|CBI39636.3| unnamed protein
           product [Vitis vinifera]
          Length = 329

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/98 (85%), Positives = 92/98 (93%)
 Frame = +3

Query: 114 TIVIDNLRFTYPGIDGHPPPGSTPLIENFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 293
           T+ I+NLRFTYPGIDG PPPGSTPLI++FSL+LN+G+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 10  TVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKH 69

Query: 294 MVDPHMVRVFGRSAFHHTALISSGVLCYLGGEWRRDVA 407
           MV+PHMVRV GRSAFH TAL SSG LCYLGGEWRRDVA
Sbjct: 70  MVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVA 107


>emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]
          Length = 329

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/98 (85%), Positives = 92/98 (93%)
 Frame = +3

Query: 114 TIVIDNLRFTYPGIDGHPPPGSTPLIENFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 293
           T+ I+NLRFTYPGIDG PPPGSTPLI++FSL+LN+G+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 10  TVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKH 69

Query: 294 MVDPHMVRVFGRSAFHHTALISSGVLCYLGGEWRRDVA 407
           MV+PHMVRV GRSAFH TAL SSG LCYLGGEWRRDVA
Sbjct: 70  MVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVA 107


>gb|ADE77121.1| unknown [Picea sitchensis]
          Length = 329

 Score =  176 bits (445), Expect = 2e-42
 Identities = 81/98 (82%), Positives = 90/98 (91%)
 Frame = +3

Query: 114 TIVIDNLRFTYPGIDGHPPPGSTPLIENFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 293
           T+ I+NL FTYPGIDGHPPPG+ PLI+NFSL+L AG+RCLLVG+NGAGKTTILKILGGKH
Sbjct: 10  TVEINNLNFTYPGIDGHPPPGAKPLIQNFSLTLRAGDRCLLVGANGAGKTTILKILGGKH 69

Query: 294 MVDPHMVRVFGRSAFHHTALISSGVLCYLGGEWRRDVA 407
           MV+PHMVRV GRSAFH T+L SSG LCYLGGEWRRDVA
Sbjct: 70  MVEPHMVRVLGRSAFHDTSLTSSGDLCYLGGEWRRDVA 107


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