BLASTX nr result

ID: Coptis24_contig00018903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018903
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320489.1| argonaute protein group [Populus trichocarpa...   127   1e-27
ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis ...   126   2e-27
emb|CBI28870.3| unnamed protein product [Vitis vinifera]              126   2e-27
gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]                125   3e-27
gb|AAO73892.1| PAZ (Piwi Argonaut and Zwille) family [Arabidopsi...   125   4e-27

>ref|XP_002320489.1| argonaute protein group [Populus trichocarpa]
           gi|222861262|gb|EEE98804.1| argonaute protein group
           [Populus trichocarpa]
          Length = 869

 Score =  127 bits (318), Expect = 1e-27
 Identities = 66/78 (84%), Positives = 69/78 (88%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   AAKIPMKPIALALKGIETEN-TGDALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDV 177
           AAKIP+K IALALKGIE +N T DALRVLDIILRQQAA RGCLLVRQSFFHDD RNF DV
Sbjct: 139 AAKIPLKSIALALKGIEIDNSTQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNFNDV 198

Query: 178 GGGVTACRGFHSSFRTTQ 231
           GGGVT  +GFHSSFRTTQ
Sbjct: 199 GGGVTGVKGFHSSFRTTQ 216


>ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis vinifera]
          Length = 960

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/78 (82%), Positives = 67/78 (85%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   AAKIPMKPIALALKGIETENTG-DALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDV 177
           AAKIP+K I LALKG E +N   DALRVLDIILRQQAA RGCLLVRQSFFHDD R+F DV
Sbjct: 231 AAKIPLKSIVLALKGSEVDNNAQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRHFTDV 290

Query: 178 GGGVTACRGFHSSFRTTQ 231
           GGGVT CRGFHSSFRTTQ
Sbjct: 291 GGGVTGCRGFHSSFRTTQ 308


>emb|CBI28870.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/78 (82%), Positives = 67/78 (85%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   AAKIPMKPIALALKGIETENTG-DALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDV 177
           AAKIP+K I LALKG E +N   DALRVLDIILRQQAA RGCLLVRQSFFHDD R+F DV
Sbjct: 186 AAKIPLKSIVLALKGSEVDNNAQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRHFTDV 245

Query: 178 GGGVTACRGFHSSFRTTQ 231
           GGGVT CRGFHSSFRTTQ
Sbjct: 246 GGGVTGCRGFHSSFRTTQ 263


>gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]
          Length = 905

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/77 (80%), Positives = 69/77 (89%)
 Frame = +1

Query: 1   AAKIPMKPIALALKGIETENTGDALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDVG 180
           AAKIPM+ IA AL+G ETEN+ +ALRVLDIILRQ AAK+GCLLVRQSFFH+D +NFVDVG
Sbjct: 183 AAKIPMQAIANALRGQETENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFVDVG 242

Query: 181 GGVTACRGFHSSFRTTQ 231
           GGV  CRGFHSSFRTTQ
Sbjct: 243 GGVLGCRGFHSSFRTTQ 259


>gb|AAO73892.1| PAZ (Piwi Argonaut and Zwille) family [Arabidopsis thaliana]
          Length = 892

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/77 (79%), Positives = 69/77 (89%)
 Frame = +1

Query: 1   AAKIPMKPIALALKGIETENTGDALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDVG 180
           AAKIPM+ IA AL+G ETEN  DALRVLDIILRQ AA++GCLLVRQSFFH+DV+NFV +G
Sbjct: 172 AAKIPMQAIASALQGKETENLQDALRVLDIILRQSAARQGCLLVRQSFFHNDVKNFVPIG 231

Query: 181 GGVTACRGFHSSFRTTQ 231
           GGV+ CRGFHSSFRTTQ
Sbjct: 232 GGVSGCRGFHSSFRTTQ 248


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