BLASTX nr result

ID: Coptis24_contig00018897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018897
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264436.1| PREDICTED: outer envelope protein of 80 kDa,...   398   e-108
ref|NP_190002.2| Outer membrane OMP85 family protein [Arabidopsi...   386   e-105
ref|XP_003543408.1| PREDICTED: outer envelope protein of 80 kDa,...   384   e-104
gb|AFK35820.1| unknown [Lotus japonicus]                              384   e-104
ref|XP_003540272.1| PREDICTED: outer envelope protein of 80 kDa,...   382   e-104

>ref|XP_002264436.1| PREDICTED: outer envelope protein of 80 kDa, chloroplastic [Vitis
           vinifera] gi|296084049|emb|CBI24437.3| unnamed protein
           product [Vitis vinifera]
          Length = 360

 Score =  398 bits (1022), Expect = e-108
 Identities = 201/270 (74%), Positives = 226/270 (83%)
 Frame = +1

Query: 103 AQQSIHAGKAKIDVNVDFTPKLITALTLPPPFRNSSNPLSQIIGSLCIKHPNLFGGSEKL 282
           A++SIHAGKA IDVNVDFT KL TAL L P FR+S  PLSQ+IGSLCIKHPNLFG SEKL
Sbjct: 3   ARKSIHAGKATIDVNVDFTHKLCTALMLQP-FRDSGGPLSQVIGSLCIKHPNLFGRSEKL 61

Query: 283 DVSWDKGLYDSSVLIAYRRPRPEWLSQQSFVVQHSISPEIGVHGFPVENFSRSGSSGVNL 462
           DVSWDKGL+DS++LIAYRRPRPEWL+QQSF++QHS+SPEIGVHGF  +NFSRS S GVNL
Sbjct: 62  DVSWDKGLFDSNILIAYRRPRPEWLAQQSFIIQHSLSPEIGVHGFTTDNFSRSVSGGVNL 121

Query: 463 SRFSVGVDLSEPASSHWSSTTSIKLEHVRPINXXXXXXXXXXXXXXXXXXHVRPINDGGR 642
           SRFSVG+DL++PASS+WS+TTSI+ E                        HVRPI+D GR
Sbjct: 122 SRFSVGMDLNDPASSNWSNTTSIRFE------------------------HVRPISDDGR 157

Query: 643 SISRDLDGFPVTCSGGTHDSMVVLKQESRYAKANDHSFTQLSLQIEQGIPVLSKWLIFNR 822
           S+SRD DGFPVTCSG  HDSMVVLKQES++AKANDHSFTQL++QIEQGIPVLSKWLIFNR
Sbjct: 158 SVSRDRDGFPVTCSGTFHDSMVVLKQESQFAKANDHSFTQLNMQIEQGIPVLSKWLIFNR 217

Query: 823 FKFVASKGVRLGPAIFLTSLTGGSIVGDMA 912
           FKFVASKGVRLGPA  L+SLTGGSIVGDMA
Sbjct: 218 FKFVASKGVRLGPAFLLSSLTGGSIVGDMA 247


>ref|NP_190002.2| Outer membrane OMP85 family protein [Arabidopsis thaliana]
           gi|56121918|gb|AAV74240.1| At3g44160 [Arabidopsis
           thaliana] gi|60543353|gb|AAX22274.1| At3g44160
           [Arabidopsis thaliana] gi|332644349|gb|AEE77870.1| Outer
           membrane OMP85 family protein [Arabidopsis thaliana]
          Length = 362

 Score =  386 bits (992), Expect = e-105
 Identities = 194/270 (71%), Positives = 218/270 (80%)
 Frame = +1

Query: 103 AQQSIHAGKAKIDVNVDFTPKLITALTLPPPFRNSSNPLSQIIGSLCIKHPNLFGGSEKL 282
           AQ+SIHAG+AKIDVNVDFT KL T+L  P  FR++S+PLS +IGSLCIKHPNLFGGSEKL
Sbjct: 3   AQKSIHAGRAKIDVNVDFTHKLCTSLMFPA-FRDTSSPLSLVIGSLCIKHPNLFGGSEKL 61

Query: 283 DVSWDKGLYDSSVLIAYRRPRPEWLSQQSFVVQHSISPEIGVHGFPVENFSRSGSSGVNL 462
           DVSWDKGLYDS+VL+A+RRPRPEW  QQ F +QHS+SPEIGVHG PV+NFSRSGS GVNL
Sbjct: 62  DVSWDKGLYDSNVLVAFRRPRPEWRPQQCFFIQHSLSPEIGVHGTPVDNFSRSGSGGVNL 121

Query: 463 SRFSVGVDLSEPASSHWSSTTSIKLEHVRPINXXXXXXXXXXXXXXXXXXHVRPINDGGR 642
           S+ ++G+DLSEPASS WSSTTSIK EH                        VRPIND GR
Sbjct: 122 SKLALGLDLSEPASSKWSSTTSIKFEH------------------------VRPINDDGR 157

Query: 643 SISRDLDGFPVTCSGGTHDSMVVLKQESRYAKANDHSFTQLSLQIEQGIPVLSKWLIFNR 822
           +I+RDLDGFP+TCSG THDSMVVLKQESR+AKA D   +  S+QIEQGIPV+SKWLIFNR
Sbjct: 158 AITRDLDGFPITCSGNTHDSMVVLKQESRFAKATDQGLSHFSMQIEQGIPVVSKWLIFNR 217

Query: 823 FKFVASKGVRLGPAIFLTSLTGGSIVGDMA 912
           FKFVASKGVR GPA  L SLTGGSIVGDMA
Sbjct: 218 FKFVASKGVRFGPAFLLASLTGGSIVGDMA 247


>ref|XP_003543408.1| PREDICTED: outer envelope protein of 80 kDa, chloroplastic-like
           [Glycine max]
          Length = 360

 Score =  384 bits (987), Expect = e-104
 Identities = 194/270 (71%), Positives = 217/270 (80%)
 Frame = +1

Query: 103 AQQSIHAGKAKIDVNVDFTPKLITALTLPPPFRNSSNPLSQIIGSLCIKHPNLFGGSEKL 282
           AQ+SIHAGKAKIDVNVDFT KL  +L LP   R++ +P S +IGSLCIKHPNLFGGSEKL
Sbjct: 3   AQKSIHAGKAKIDVNVDFTHKLCASLMLPT-LRSTGSPFSLVIGSLCIKHPNLFGGSEKL 61

Query: 283 DVSWDKGLYDSSVLIAYRRPRPEWLSQQSFVVQHSISPEIGVHGFPVENFSRSGSSGVNL 462
           DVSWDKGLYDS+VL+AYRRPRPEWL+QQSFV+QHS+SPEIGVHG PV NFSRSGS G+NL
Sbjct: 62  DVSWDKGLYDSNVLVAYRRPRPEWLAQQSFVLQHSLSPEIGVHGIPVNNFSRSGSGGINL 121

Query: 463 SRFSVGVDLSEPASSHWSSTTSIKLEHVRPINXXXXXXXXXXXXXXXXXXHVRPINDGGR 642
           SR SVG+DL EPASS WSSTTSIK EH                        VRP+ND GR
Sbjct: 122 SRLSVGMDLKEPASSKWSSTTSIKFEH------------------------VRPLNDDGR 157

Query: 643 SISRDLDGFPVTCSGGTHDSMVVLKQESRYAKANDHSFTQLSLQIEQGIPVLSKWLIFNR 822
           +I RD DGFP+T SG  HDSMVVLKQES++AKAND+SF   +LQIEQGIPVLSKW+IFNR
Sbjct: 158 AICRDYDGFPLTSSGNPHDSMVVLKQESQFAKANDNSFFHFNLQIEQGIPVLSKWIIFNR 217

Query: 823 FKFVASKGVRLGPAIFLTSLTGGSIVGDMA 912
           FKFVASKG++LGPA  LT LTGGSIVGDMA
Sbjct: 218 FKFVASKGIKLGPAFLLTRLTGGSIVGDMA 247


>gb|AFK35820.1| unknown [Lotus japonicus]
          Length = 360

 Score =  384 bits (985), Expect = e-104
 Identities = 192/270 (71%), Positives = 214/270 (79%)
 Frame = +1

Query: 103 AQQSIHAGKAKIDVNVDFTPKLITALTLPPPFRNSSNPLSQIIGSLCIKHPNLFGGSEKL 282
           AQ+SIHAGKAKIDVNVDFT KL  +L  P   R+  NPL  +IGSLCIKHPNLFGGSEKL
Sbjct: 3   AQKSIHAGKAKIDVNVDFTHKLCASLMFPT-LRSYENPLRLVIGSLCIKHPNLFGGSEKL 61

Query: 283 DVSWDKGLYDSSVLIAYRRPRPEWLSQQSFVVQHSISPEIGVHGFPVENFSRSGSSGVNL 462
           DVSWDKGLYDS++L+AYRRPRPEWL+QQSFV+QHS+SPEI VHG P+ NFSRSGS GVNL
Sbjct: 62  DVSWDKGLYDSNILVAYRRPRPEWLAQQSFVLQHSLSPEIAVHGIPINNFSRSGSGGVNL 121

Query: 463 SRFSVGVDLSEPASSHWSSTTSIKLEHVRPINXXXXXXXXXXXXXXXXXXHVRPINDGGR 642
           S+ SVG+DL EP S+ WSSTT IK EH                        VRP+ND GR
Sbjct: 122 SKLSVGLDLKEPMSTKWSSTTGIKFEH------------------------VRPLNDDGR 157

Query: 643 SISRDLDGFPVTCSGGTHDSMVVLKQESRYAKANDHSFTQLSLQIEQGIPVLSKWLIFNR 822
           +ISRD DGFP+TCSG THDSMVVLKQESR+AKAND SF   +LQIEQGIPVLSKW++FNR
Sbjct: 158 AISRDYDGFPLTCSGSTHDSMVVLKQESRFAKANDRSFFHFNLQIEQGIPVLSKWILFNR 217

Query: 823 FKFVASKGVRLGPAIFLTSLTGGSIVGDMA 912
           FKFVASKGV+LGPA  LT LTGGSIVGDMA
Sbjct: 218 FKFVASKGVKLGPAFLLTRLTGGSIVGDMA 247


>ref|XP_003540272.1| PREDICTED: outer envelope protein of 80 kDa, chloroplastic-like
           [Glycine max]
          Length = 360

 Score =  382 bits (982), Expect = e-104
 Identities = 192/270 (71%), Positives = 216/270 (80%)
 Frame = +1

Query: 103 AQQSIHAGKAKIDVNVDFTPKLITALTLPPPFRNSSNPLSQIIGSLCIKHPNLFGGSEKL 282
           AQ+SIHAGKAKIDVNVDFT KL  +L LP   R++ +P S +IGSLCIKHPNLFGGSEKL
Sbjct: 3   AQKSIHAGKAKIDVNVDFTHKLCASLMLPT-LRSTGSPFSLVIGSLCIKHPNLFGGSEKL 61

Query: 283 DVSWDKGLYDSSVLIAYRRPRPEWLSQQSFVVQHSISPEIGVHGFPVENFSRSGSSGVNL 462
           DVSWDKGLYDS+V +AYRRPRPEWL+QQSFV+QHS+SPEIG+HG PV NFSRSGS G+NL
Sbjct: 62  DVSWDKGLYDSNVFVAYRRPRPEWLAQQSFVLQHSLSPEIGIHGIPVNNFSRSGSGGINL 121

Query: 463 SRFSVGVDLSEPASSHWSSTTSIKLEHVRPINXXXXXXXXXXXXXXXXXXHVRPINDGGR 642
           SR SVG+DL EPASS WSSTTSIK EH                        VRP+ND GR
Sbjct: 122 SRLSVGMDLKEPASSKWSSTTSIKFEH------------------------VRPLNDDGR 157

Query: 643 SISRDLDGFPVTCSGGTHDSMVVLKQESRYAKANDHSFTQLSLQIEQGIPVLSKWLIFNR 822
           +I RD DGFP+T SG  HDSMVVLKQES++AKAND+SF   +LQIEQGIPVLSKW+IFNR
Sbjct: 158 AICRDYDGFPLTSSGNPHDSMVVLKQESQFAKANDNSFFHFNLQIEQGIPVLSKWIIFNR 217

Query: 823 FKFVASKGVRLGPAIFLTSLTGGSIVGDMA 912
           FKFVASKG++LGPA  LT LTGGSIVGDMA
Sbjct: 218 FKFVASKGIKLGPAFLLTRLTGGSIVGDMA 247


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