BLASTX nr result

ID: Coptis24_contig00018888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018888
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV57768.1| serine C-palmitoyltransferase [Gossypium hirsutum]      62   5e-08
ref|XP_002318306.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vi...    61   1e-07
emb|CBI27714.3| unnamed protein product [Vitis vinifera]               61   1e-07
dbj|BAG68483.1| serine palmitoyltransferase subunit I [Nicotiana...    60   2e-07

>gb|ABV57768.1| serine C-palmitoyltransferase [Gossypium hirsutum]
          Length = 353

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = -2

Query: 110 DGLHLSRSTVVYFKHNDMESLERALEKITRENKRA 6
           +GL+LSRST+VYFKHNDMESLE+ LEKIT +NKRA
Sbjct: 208 NGLYLSRSTIVYFKHNDMESLEKTLEKITAQNKRA 242


>ref|XP_002318306.1| predicted protein [Populus trichocarpa] gi|222858979|gb|EEE96526.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -2

Query: 110 DGLHLSRSTVVYFKHNDMESLERALEKITRENKRA 6
           +GL+LSRST+VYFKHNDMESL  ALEKIT ENKRA
Sbjct: 208 NGLYLSRSTIVYFKHNDMESLRNALEKITVENKRA 242


>ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vitis vinifera]
          Length = 480

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = -2

Query: 110 DGLHLSRSTVVYFKHNDMESLERALEKITRENKRA 6
           +GL+LSRST+VYFKHNDMESL+  LEKIT ENKRA
Sbjct: 205 NGLYLSRSTIVYFKHNDMESLQNTLEKITLENKRA 239


>emb|CBI27714.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = -2

Query: 110 DGLHLSRSTVVYFKHNDMESLERALEKITRENKRA 6
           +GL+LSRST+VYFKHNDMESL+  LEKIT ENKRA
Sbjct: 208 NGLYLSRSTIVYFKHNDMESLQNTLEKITLENKRA 242


>dbj|BAG68483.1| serine palmitoyltransferase subunit I [Nicotiana benthamiana]
          Length = 231

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -2

Query: 110 DGLHLSRSTVVYFKHNDMESLERALEKITRENKRA 6
           +GL LSRST++YFKHNDMESL   LEKIT+ENKRA
Sbjct: 100 NGLQLSRSTIIYFKHNDMESLRNTLEKITQENKRA 134