BLASTX nr result

ID: Coptis24_contig00018885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018885
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31257.3| unnamed protein product [Vitis vinifera]              325   1e-86
ref|XP_002525514.1| conserved hypothetical protein [Ricinus comm...   325   2e-86
ref|XP_002327389.1| predicted protein [Populus trichocarpa] gi|1...   307   4e-81
ref|XP_002325508.1| predicted protein [Populus trichocarpa] gi|2...   305   2e-80
gb|ABK95224.1| unknown [Populus trichocarpa]                          305   2e-80

>emb|CBI31257.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  325 bits (834), Expect = 1e-86
 Identities = 183/302 (60%), Positives = 201/302 (66%)
 Frame = -2

Query: 1087 PTSFLFPFKPKRFHLFKPCXXXXXXXXXXXXXXXSINKFPLSLTRLVSSKDSNGDNDEKK 908
            P+SFLF F+PKRFH  KPC                     L  T+    K S+G N  + 
Sbjct: 29   PSSFLFSFRPKRFHFLKPCSS-------------------LKQTKKQLQKTSSGSNAPQS 69

Query: 907  LSDDGFGGENAFKXXXXXXXXXXXXXXXXXXXXXXYRDQINSFLTQFTGFIEGYGPAGYA 728
            L    F    + K                      YRDQIN+FLTQF+GFIEGYGPAGYA
Sbjct: 70   LR--WFLNPKSIKGTLLAGLLLVGVVGGFATVGYVYRDQINAFLTQFSGFIEGYGPAGYA 127

Query: 727  LFVVVYAGLEILAIPAIPLTMSAGVLFGTYTGTIIVSISGTVAATLAFLIARYFARERIL 548
            LFV VYAGLEILAIPAIPLTMSAG+LFG++TGTIIVSISGTVAA++AFLIARYFARERIL
Sbjct: 128  LFVAVYAGLEILAIPAIPLTMSAGLLFGSFTGTIIVSISGTVAASVAFLIARYFARERIL 187

Query: 547  KMVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXLGNYLYGLTSVKFLPYVLGSWLGM 368
            K+VEGNKKFLAIDKAIGENGFRVVT           LGNYLYGLTSVKF+PYVLGSWLGM
Sbjct: 188  KLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGM 247

Query: 367  LPGTWAYVSAGAFGRAIIQEESDAGLVXXXXXXXXXXXXXXXXXXXXAYVTRLANDAVKD 188
            LPGTWAYVSAGAFGRAIIQ+ESD GL+                     YVTRLA DAVKD
Sbjct: 248  LPGTWAYVSAGAFGRAIIQDESDIGLLGGNNSLITLGLGLLVTALAATYVTRLAKDAVKD 307

Query: 187  LE 182
            +E
Sbjct: 308  IE 309


>ref|XP_002525514.1| conserved hypothetical protein [Ricinus communis]
            gi|223535193|gb|EEF36872.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 334

 Score =  325 bits (832), Expect = 2e-86
 Identities = 188/306 (61%), Positives = 206/306 (67%), Gaps = 5/306 (1%)
 Frame = -2

Query: 1084 TSFLFPFKP-KRFHLFKPCXXXXXXXXXXXXXXXSINKFPLSLTRLVSSKDSNGDNDE-- 914
            TSFL+ F+P KRFH   PC                 N  P SL   ++ K S  D+D+  
Sbjct: 32   TSFLYSFRPNKRFHFLTPCSSLKQTKKQTLQKS---NTAPQSLRWFLNPKGSGDDDDKIN 88

Query: 913  KKLSDDGFG--GENAFKXXXXXXXXXXXXXXXXXXXXXXYRDQINSFLTQFTGFIEGYGP 740
            K  +DDG G  G+ A K                      YRDQIN+FL QF+GFIEGYGP
Sbjct: 89   KGENDDGGGLEGDTAIKGTLLAGVLLVGVVGGFGAVGYVYRDQINAFLNQFSGFIEGYGP 148

Query: 739  AGYALFVVVYAGLEILAIPAIPLTMSAGVLFGTYTGTIIVSISGTVAATLAFLIARYFAR 560
            AGYALFV VYAGLEILAIPAIPLTMSAG+LFG+  GTIIVSISGTVAA++AFLIARYFAR
Sbjct: 149  AGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFAR 208

Query: 559  ERILKMVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXLGNYLYGLTSVKFLPYVLGS 380
            ERILK+VEGNKKFLAIDKAIGENGFRVVT           LGNYLYGLTSVKF+PYVLGS
Sbjct: 209  ERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGS 268

Query: 379  WLGMLPGTWAYVSAGAFGRAIIQEESDAGLVXXXXXXXXXXXXXXXXXXXXAYVTRLAND 200
            WLGMLPGTWAYVSAGAFGRAIIQEESD GLV                    AYVT+LA D
Sbjct: 269  WLGMLPGTWAYVSAGAFGRAIIQEESDIGLVGGNNSLLTLGLGLLVTALAAAYVTKLAKD 328

Query: 199  AVKDLE 182
            AVKD+E
Sbjct: 329  AVKDIE 334


>ref|XP_002327389.1| predicted protein [Populus trichocarpa] gi|118487737|gb|ABK95692.1|
            unknown [Populus trichocarpa] gi|222835759|gb|EEE74194.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  307 bits (786), Expect = 4e-81
 Identities = 177/308 (57%), Positives = 198/308 (64%), Gaps = 7/308 (2%)
 Frame = -2

Query: 1084 TSFLFPFKP-KRFHLFKPCXXXXXXXXXXXXXXXSINKFPLSLTRLVSSKDSNGDNDEKK 908
            T F + F+P KR H   PC                    P SL   ++ K   GD+ + K
Sbjct: 29   TLFHYSFRPNKRIHFLTPCSSLKQRKKQPETLRK--TNAPQSLRWFLNPK---GDDSDDK 83

Query: 907  LSDDG------FGGENAFKXXXXXXXXXXXXXXXXXXXXXXYRDQINSFLTQFTGFIEGY 746
            +  DG        G+ AFK                      Y+DQIN+FL QF+GFIEGY
Sbjct: 84   IKGDGGEAEEGLEGDTAFKGTLLAGVLLVGVVGGFGAVGYIYKDQINAFLNQFSGFIEGY 143

Query: 745  GPAGYALFVVVYAGLEILAIPAIPLTMSAGVLFGTYTGTIIVSISGTVAATLAFLIARYF 566
            GPAGYALFV VYAGLEILAIPAIPLTMSAG+LFG+  GTIIVSISGTVAA++AFLIARYF
Sbjct: 144  GPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSLIGTIIVSISGTVAASIAFLIARYF 203

Query: 565  ARERILKMVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXLGNYLYGLTSVKFLPYVL 386
            ARERILK+V+GNKKFLAIDKAIGENGF+VVT           LGNYLYGLTSVKF+PYVL
Sbjct: 204  ARERILKLVQGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFIPYVL 263

Query: 385  GSWLGMLPGTWAYVSAGAFGRAIIQEESDAGLVXXXXXXXXXXXXXXXXXXXXAYVTRLA 206
            GSWLGMLPGTWAYVSAGAFGRAIIQEES+ GL                      YVTRLA
Sbjct: 264  GSWLGMLPGTWAYVSAGAFGRAIIQEESEIGLGGGNGGLWTLGLGLLVTAIAATYVTRLA 323

Query: 205  NDAVKDLE 182
             DAVKD+E
Sbjct: 324  KDAVKDIE 331


>ref|XP_002325508.1| predicted protein [Populus trichocarpa] gi|222862383|gb|EEE99889.1|
            predicted protein [Populus trichocarpa]
          Length = 289

 Score =  305 bits (780), Expect = 2e-80
 Identities = 172/292 (58%), Positives = 193/292 (66%)
 Frame = -2

Query: 1057 KRFHLFKPCXXXXXXXXXXXXXXXSINKFPLSLTRLVSSKDSNGDNDEKKLSDDGFGGEN 878
            KRFH   PC                    P S+   +++K   GD+ E   +++G  G+ 
Sbjct: 6    KRFHFLSPCSSLKQKKKQQQTLRK--TNAPQSVRWFLNTK---GDDSE---AEEGLEGDT 57

Query: 877  AFKXXXXXXXXXXXXXXXXXXXXXXYRDQINSFLTQFTGFIEGYGPAGYALFVVVYAGLE 698
            AFK                      Y+DQIN+FL QF+GFIEGYGPAGYALFV VYAGLE
Sbjct: 58   AFKGTLLAGVLLVGVVGGFGAVGYIYKDQINAFLNQFSGFIEGYGPAGYALFVAVYAGLE 117

Query: 697  ILAIPAIPLTMSAGVLFGTYTGTIIVSISGTVAATLAFLIARYFARERILKMVEGNKKFL 518
            ILAIPAIPLTMSAG+LFG+  GTIIVSISGT AA++AFLIARYFARERILK+VEGNKKFL
Sbjct: 118  ILAIPAIPLTMSAGLLFGSLIGTIIVSISGTAAASIAFLIARYFARERILKLVEGNKKFL 177

Query: 517  AIDKAIGENGFRVVTXXXXXXXXXXXLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSA 338
            AIDKAIGENGF+VVT           LGNYLYGLTSVKF+PYVLGSWLGMLPGTWAYVSA
Sbjct: 178  AIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFIPYVLGSWLGMLPGTWAYVSA 237

Query: 337  GAFGRAIIQEESDAGLVXXXXXXXXXXXXXXXXXXXXAYVTRLANDAVKDLE 182
            GAFGRAIIQEES+ GL                      YVTRLA DAVKD+E
Sbjct: 238  GAFGRAIIQEESELGLREGNSGLWTLGLGLLVTAIAATYVTRLAKDAVKDIE 289


>gb|ABK95224.1| unknown [Populus trichocarpa]
          Length = 321

 Score =  305 bits (780), Expect = 2e-80
 Identities = 172/292 (58%), Positives = 193/292 (66%)
 Frame = -2

Query: 1057 KRFHLFKPCXXXXXXXXXXXXXXXSINKFPLSLTRLVSSKDSNGDNDEKKLSDDGFGGEN 878
            KRFH   PC                    P S+   +++K   GD+ E   +++G  G+ 
Sbjct: 38   KRFHFLSPCSSLKQKKKQQQTLRK--TNAPQSVRWFLNTK---GDDSE---AEEGLEGDT 89

Query: 877  AFKXXXXXXXXXXXXXXXXXXXXXXYRDQINSFLTQFTGFIEGYGPAGYALFVVVYAGLE 698
            AFK                      Y+DQIN+FL QF+GFIEGYGPAGYALFV VYAGLE
Sbjct: 90   AFKGTLLAGVLLVGVVGGFGAVGYIYKDQINAFLNQFSGFIEGYGPAGYALFVAVYAGLE 149

Query: 697  ILAIPAIPLTMSAGVLFGTYTGTIIVSISGTVAATLAFLIARYFARERILKMVEGNKKFL 518
            ILAIPAIPLTMSAG+LFG+  GTIIVSISGT AA++AFLIARYFARERILK+VEGNKKFL
Sbjct: 150  ILAIPAIPLTMSAGLLFGSLIGTIIVSISGTAAASIAFLIARYFARERILKLVEGNKKFL 209

Query: 517  AIDKAIGENGFRVVTXXXXXXXXXXXLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSA 338
            AIDKAIGENGF+VVT           LGNYLYGLTSVKF+PYVLGSWLGMLPGTWAYVSA
Sbjct: 210  AIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFIPYVLGSWLGMLPGTWAYVSA 269

Query: 337  GAFGRAIIQEESDAGLVXXXXXXXXXXXXXXXXXXXXAYVTRLANDAVKDLE 182
            GAFGRAIIQEES+ GL                      YVTRLA DAVKD+E
Sbjct: 270  GAFGRAIIQEESELGLREGNSGLLTLGLGLLVTAIAATYVTRLAKDAVKDIE 321


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