BLASTX nr result
ID: Coptis24_contig00018884
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018884 (1417 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine... 137 9e-30 ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2... 133 1e-28 ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 132 3e-28 ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ... 131 4e-28 ref|XP_003610528.1| F-box family protein [Medicago truncatula] g... 129 2e-27 >ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max] Length = 392 Score = 137 bits (344), Expect = 9e-30 Identities = 103/369 (27%), Positives = 174/369 (47%), Gaps = 9/369 (2%) Frame = +1 Query: 1 KYLIKFRCVSKTWLKLLKSDIHFINLHFHRSIQSNHSSLLLIRKHHGIKETDFYHADXXX 180 K L++FR SK+W L+ S HF ++H RS+ ++ L++R + +T+F D Sbjct: 20 KSLLRFRSTSKSWKSLIDSQ-HFNSVHLSRSLSLTSNTTLILRLDSDLYQTNFPTLDP-- 76 Query: 181 XXXXXXXXXXPLYLEFPILPDFWYPPPC---DHPIIGMCNGLLCLTTHCDKPFSNVYVWN 351 PL+L P++ C + ++G CNGLLC++ D ++ WN Sbjct: 77 ----------PLFLNHPLM--------CYSNNITLLGSCNGLLCISNVAD----DIAFWN 114 Query: 352 PLTNVYITIPCPSIPSYFCLKNYCYKNNKVIRYAFGFHQGSNEYKLLRFMYVLPTSEQTF 531 P + +P +P + +V Y FGF S +YKL+R Y + +++F Sbjct: 115 PSLRQHRILPSLPLPRRRLHPDTTLFAARV--YGFGFDHTSPDYKLVRISYFVDLQDRSF 172 Query: 532 QTDVSLYTLGGSGVWKTLDSVSYYINALEP--ALVNGFLHWISPLYYNSIEK-IIVSFDI 702 + V LYTL + WKTL S+ Y + V LHW+ + +IV+FD+ Sbjct: 173 DSQVKLYTLRANA-WKTLPSMPYALCCARTMGVFVGNSLHWVVTRKLEPDQPDLIVAFDL 231 Query: 703 KDEVFHEILMPK-GFNYDDYEMQAGELGGSLCIFGRLYEWEVEVWVMKEYGVVGSWTKLY 879 E+F E+ +P G +E+ LG SLC+ + +++VWVM+EY SW KL+ Sbjct: 232 THEIFTELPLPDTGGVGGGFEIDVALLGDSLCMTVNFHNSKMDVWVMREYNRGDSWCKLF 291 Query: 880 KVGRAEIEGEFFYLEPLGVANSGEIIAWKNGLELLLYNPKTNLIRTLEKFG--VRFSKAY 1053 + + F L PLG ++ G + ++ + L + TL + ++A Sbjct: 292 TLEESRELRSFKCLRPLGYSSDGNKVLLEHDRKRLCWYDLGKKEVTLVRIQGLPNLNEAM 351 Query: 1054 TFIGSLVSP 1080 +G+LV+P Sbjct: 352 ICLGTLVTP 360 >ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1| predicted protein [Populus trichocarpa] Length = 374 Score = 133 bits (335), Expect = 1e-28 Identities = 109/378 (28%), Positives = 174/378 (46%), Gaps = 14/378 (3%) Frame = +1 Query: 1 KYLIKFRCVSKTWLKLLKSDIHFINLHFHRSIQ---SNHSSLLLIRKHH-GIKETDFYHA 168 K L++F+CVSKTW L+ S F+ H R+ + +NH + L H I ++ A Sbjct: 23 KCLVRFKCVSKTWRSLI-SHPEFVKNHLKRTKEDTNANHYKIFLSTDPHLSIDPEAYFDA 81 Query: 169 DXXXXXXXXXXXXXPLYLEFPILPDFWYPPPCDHPIIGMCNGLLCLTTHCDKPFSNVYVW 348 D L+FP+ YP I+G CNGL+C H D P +Y+W Sbjct: 82 DDNLLTTQ---------LKFPVS----YPEYSYIEILGSCNGLVCGLIH-DNPL--IYIW 125 Query: 349 NPLTNVY--ITIPCPSIPSYFCLKNYCYKNNKVIRYAFGFHQGSNEYKLLRFMYVLPTSE 522 NP T + IP S F Y FG+ ++YK++R T+ Sbjct: 126 NPSTRESRELAIPGSSEDDAF--------------YGFGYDVKLDDYKIVRVSISTSTNS 171 Query: 523 ---QTFQTDVSLYTLGGSGVWKTLDSVSYYINALEPA-LVNGFLHWISPLYYNSIEK-II 687 +T V ++TL S +W+T+ + + P L NG LHW+ +K ++ Sbjct: 172 TDGSNSETKVEVFTLK-SNIWRTIQDLRCSVLLEGPGTLANGALHWLVRQENGGSKKCVM 230 Query: 688 VSFDIKDEVFHEILMPKGFNYDD--YEMQAGELGGSLCIFGRLYEWEVEVWVMKEYGVVG 861 VSFD+ +E F E++ +G DD ++++ LG LC++ Y E W+MKEY Sbjct: 231 VSFDLSEEKFLEMVPLRGLTEDDSSWDLELKVLGDWLCLYSH-YGLICEAWIMKEYSSEA 289 Query: 862 SWTKLYKVGRAEIEGEFFYLEPLGVANSGEIIAWKNGLELLLYNPKTNLIRTLEKFGV-R 1038 SWT+ + I G ++ L V +G ++ +G E++ YNP + R + Sbjct: 290 SWTRFLRFNGESIPGGKYWFRLLWVTKNGNVVYDLDGREVVFYNPDEDTARPFIIYHEGD 349 Query: 1039 FSKAYTFIGSLVSPKVIN 1092 + ++ +I SLVSP I+ Sbjct: 350 WFESTAYIESLVSPNNIS 367 >ref|XP_002308787.1| f-box family protein [Populus trichocarpa] gi|222854763|gb|EEE92310.1| f-box family protein [Populus trichocarpa] Length = 396 Score = 132 bits (331), Expect = 3e-28 Identities = 108/400 (27%), Positives = 194/400 (48%), Gaps = 14/400 (3%) Frame = +1 Query: 1 KYLIKFRCVSKTWLKLLKSDIHFINLHFHRSIQSNHSSLLLIRKHHGIKETDFYHADXXX 180 K L+ R VSK W L+ +F+ LH S+ ++ + +++R + DF Sbjct: 19 KELLCCRSVSKPWCALIDGP-NFVKLHLKHSMDTSSNLYIILRTTSHVHYMDFEQ----- 72 Query: 181 XXXXXXXXXXPLYLEFPILPDFWYPPPCDH---PIIGMCNGLLCLTTHCDKPFSNVYVWN 351 + + L + +P C + ++G NGLLC++ D ++ VWN Sbjct: 73 ---------NLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVD----DIAVWN 119 Query: 352 PLTNVYITIPCPSIPSYFCLKNYC-YKNNKVIRYAFGFHQGSNEYKLLRFMYVLPTSEQT 528 P T + +P I LK Y K+ V + FG+ ++YKL+R +++ Sbjct: 120 PSTRKHRVVPFLPIE----LKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRS 175 Query: 529 FQTDVSLYTLGGSGVWKTLDSVSYYIN--ALEPALVNGFLHWI---SPLYYNSIEKIIVS 693 F+++V +Y+L W+ + + Y ++ NG LHW+ +P +++ I+V+ Sbjct: 176 FESEVKVYSLRKQS-WRRIGDMPYCVHYPGANGVFANGALHWVVGENP--ESNVANIVVA 232 Query: 694 FDIKDEVFHEILMPKGFNYDDYEMQAGELGGSLCIFGRLYEWEVEVWVMKEYGVVGSWTK 873 D+ E + E+L P+ + ++ + G L G LC V+VW+MKEYGV SWTK Sbjct: 233 LDLGVEDYREVLQPE-YKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTK 291 Query: 874 LYKVGRAEIEGEFFYLEPLGVANSG-EIIAWKNGLELLLYNPKTNLIRTLEKFGVRFS-K 1047 L+ V + E+ G L+PL + SG E++ + L+L Y+ K ++ G+ +S + Sbjct: 292 LFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKNRIP-GIPYSFE 350 Query: 1048 AYTFIGSLVS---PKVINGVTLSDTLRI*KNAEDKKTRAD 1158 A TF+ SL+S + ++G T D ++++D+ R D Sbjct: 351 ADTFVESLISVSPNRHLDGRTQDDD----EDSKDRNKRDD 386 >ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 369 Score = 131 bits (330), Expect = 4e-28 Identities = 99/370 (26%), Positives = 167/370 (45%), Gaps = 5/370 (1%) Frame = +1 Query: 1 KYLIKFRCVSKTWLKLLKSDIHFINLHFHRSIQSNHSSLLLIRKHHGIKETDFYHADXXX 180 K+LI+F+CV +TW L+ SD F LH R +Q + L H + D + + Sbjct: 23 KHLIQFKCVCRTWQYLISSDPEFAKLHLERVLQVTNVHL-----HRLLLSADPFQSVDME 77 Query: 181 XXXXXXXXXXPLYLEFPILPDFWYPPPCDHPIIGMCNGLLCLTTHCDKPFSNVYVWNPLT 360 FP+ P D +G CNGL+ D + VWNP T Sbjct: 78 AYCDADDNFLIREHRFPVRN----PEDDDFEFVGSCNGLISAVFGSDH---EITVWNPST 130 Query: 361 NVYITIPCPSIPSYFCLKNYCYKNNKVIRYAFGFHQGSNEYKLLRFMYVLPTSEQTFQTD 540 +P P+ + + Y FG+ ++YK++R +S + Sbjct: 131 GESRKLPAPTSST-----------EDKLFYGFGYDSKLDDYKIVRGA----SSASCNEVQ 175 Query: 541 VSLYTLGGSGVWKTLDSVSYYINALEPAL-VNGFLHWISPLYYNSIEKIIVSFDIKDEVF 717 + ++ L G+ W+ + ++ + A+ +NG LHW+ + +IVS D+ +E F Sbjct: 176 MEVFNLKGNR-WRAIQNLHCNVRFQGSAIALNGILHWLVDQLNEGL--MIVSLDLAEEKF 232 Query: 718 HEILMPKGFNYDDYEMQAGELGGSLCIFGRLYEWEVEVWVMKEYGVVGSWTKLYKVGRAE 897 E+++ + +++ + LG SL + + E W +K YG SW KL+ Sbjct: 233 LEMVVLPDYVTENWGTELKVLGDSLSVCSSSHTTNFEAWTVKGYGSKASWLKLFSFNSDP 292 Query: 898 IEGEFFYLEPLGVANSGEIIAWKNGLELLLYNPKTNLIRTLEKFGV----RFSKAYTFIG 1065 + G ++L L VA +G ++ GLE+++YNPK +TL++F V + +A T+I Sbjct: 293 LPGCKYWLNVLWVAKNGNVLLNYEGLEIIVYNPKE---QTLKQFNVPNNWHWFEAITYIE 349 Query: 1066 SLVSPKVING 1095 SLVSP NG Sbjct: 350 SLVSPNAGNG 359 >ref|XP_003610528.1| F-box family protein [Medicago truncatula] gi|355511583|gb|AES92725.1| F-box family protein [Medicago truncatula] Length = 392 Score = 129 bits (324), Expect = 2e-27 Identities = 106/400 (26%), Positives = 182/400 (45%), Gaps = 14/400 (3%) Frame = +1 Query: 1 KYLIKFRCVSKTWLKLLKSDIHFINLHFHRSIQSNHSSLLLIRKHHGIKETDFYHADXXX 180 K L++ R K W L+ S FI LH +S S++++R+H + E D D Sbjct: 19 KPLLRLRSTCKWWRNLIDST-DFIFLHLSKS----RDSVIILRQHSRLYELDLNSMDRVK 73 Query: 181 XXXXXXXXXXPLYLEFPILPDFWYPPPCDH---PIIGMCNGLLCLTTHCDKPFSNVYVWN 351 L+ P++ C ++G CNGLLC+ D ++ WN Sbjct: 74 E------------LDHPLM--------CYSNRIKVLGSCNGLLCICNIAD----DIAFWN 109 Query: 352 PLTNVYITIPCPSIPSYFCLKNYCYKNNKVIR------YAFGFHQGSNEYKLLRFMYVLP 513 P + IP + ++ +NN + Y FG+ +++YKL+ Y + Sbjct: 110 PTIRKHRIIPSEPL-----IRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYFVD 164 Query: 514 TSEQTFQTDVSLYTLGGSGVWKTLDSVSYYINALEP--ALVNGFLHWISPLYYNSIEK-I 684 ++F + V +YT+ + VWKTL S+ Y + V+G LHW+ + + Sbjct: 165 LHNRSFDSHVKIYTMR-TDVWKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRDL 223 Query: 685 IVSFDIKDEVFHEILMPKGFNYDDYEMQAGELGGSLCIFGRLYEWEVEVWVMKEYGVVGS 864 IV+FD++ EVF E+ +P G ++M L G LCI +VWVM+EYG S Sbjct: 224 IVAFDLRFEVFREVALP-GTVDGKFDMDVALLRGMLCIIENRGSDGFDVWVMREYGSHDS 282 Query: 865 WTKLYKVGRAEIEGEFFYLEPLGVANSGE-IIAWKNGLELLLYNPKTNLIRTLEKFGVRF 1041 W K++ VG+ L+PLG + +G+ ++ ++ +L YN + + + G+ Sbjct: 283 WCKMFTVGQPRDVKLMKSLKPLGYSRNGDKVLFEQDSKKLCWYNLASKDVSWVRISGIPN 342 Query: 1042 S-KAYTFIGSLVSPKVINGVTLSDTLRI*KNAEDKKTRAD 1158 S + +GSLV P ++ ++ + ++KK R D Sbjct: 343 SIEGTVCVGSLVKPSLMMNRSVQSKKQKLVEEKNKKKRDD 382