BLASTX nr result

ID: Coptis24_contig00018881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018881
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24673.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002273955.1| PREDICTED: 15 kDa selenoprotein-like [Vitis ...   192   2e-47
ref|XP_002326051.1| predicted protein [Populus trichocarpa] gi|2...   184   6e-45
ref|XP_002330653.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
gb|ABK93787.1| unknown [Populus trichocarpa]                          183   1e-44

>emb|CBI24673.3| unnamed protein product [Vitis vinifera]
          Length = 151

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/104 (86%), Positives = 99/104 (95%)
 Frame = +2

Query: 2   LVSDCRKCCTEDSDDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQFPSVRIQYVF 181
           LVSDC KCCTEDSDDSMSKITYSGA+LEVC RKLVFYPEVVGFIEEEKD+FPSV++QY+F
Sbjct: 48  LVSDCLKCCTEDSDDSMSKITYSGAILEVCMRKLVFYPEVVGFIEEEKDKFPSVKVQYLF 107

Query: 182 NSPPKLVMLDNDGQYKETIRIDNWKREHLLQFLTEKVKRTSSAI 313
           NSPPKL+MLD+DGQ+KETIRIDNWKREH+LQFL EKVK  SSAI
Sbjct: 108 NSPPKLIMLDDDGQHKETIRIDNWKREHILQFLREKVKPASSAI 151


>ref|XP_002273955.1| PREDICTED: 15 kDa selenoprotein-like [Vitis vinifera]
          Length = 165

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/104 (86%), Positives = 99/104 (95%)
 Frame = +2

Query: 2   LVSDCRKCCTEDSDDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQFPSVRIQYVF 181
           LVSDC KCCTEDSDDSMSKITYSGA+LEVC RKLVFYPEVVGFIEEEKD+FPSV++QY+F
Sbjct: 62  LVSDCLKCCTEDSDDSMSKITYSGAILEVCMRKLVFYPEVVGFIEEEKDKFPSVKVQYLF 121

Query: 182 NSPPKLVMLDNDGQYKETIRIDNWKREHLLQFLTEKVKRTSSAI 313
           NSPPKL+MLD+DGQ+KETIRIDNWKREH+LQFL EKVK  SSAI
Sbjct: 122 NSPPKLIMLDDDGQHKETIRIDNWKREHILQFLREKVKPASSAI 165


>ref|XP_002326051.1| predicted protein [Populus trichocarpa] gi|222862926|gb|EEF00433.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  184 bits (468), Expect = 6e-45
 Identities = 83/102 (81%), Positives = 97/102 (95%)
 Frame = +2

Query: 2   LVSDCRKCCTEDSDDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQFPSVRIQYVF 181
           LVSDC KCCTEDSDDS+SKITYSGA++EVC RKLVFYPE+VGFIEEEKDQFP+V++QY+F
Sbjct: 48  LVSDCLKCCTEDSDDSISKITYSGAIIEVCMRKLVFYPEIVGFIEEEKDQFPTVKVQYLF 107

Query: 182 NSPPKLVMLDNDGQYKETIRIDNWKREHLLQFLTEKVKRTSS 307
           NSPPKL+MLD++GQ+KETIRIDNWKREH+LQFL EKVK  S+
Sbjct: 108 NSPPKLIMLDDEGQHKETIRIDNWKREHMLQFLQEKVKPASA 149


>ref|XP_002330653.1| predicted protein [Populus trichocarpa] gi|222872257|gb|EEF09388.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  183 bits (465), Expect = 1e-44
 Identities = 83/103 (80%), Positives = 97/103 (94%)
 Frame = +2

Query: 2   LVSDCRKCCTEDSDDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQFPSVRIQYVF 181
           LVSDC KCCTEDSDDS+SKITYSGA+LEVC RKLVFYPE+VGFIEEEKDQFP+ ++QY+F
Sbjct: 57  LVSDCLKCCTEDSDDSISKITYSGAILEVCMRKLVFYPEIVGFIEEEKDQFPTFKVQYLF 116

Query: 182 NSPPKLVMLDNDGQYKETIRIDNWKREHLLQFLTEKVKRTSSA 310
           NSPPKL+MLD+ GQ+KETIRIDNWKREH+LQ+L EKVK TS++
Sbjct: 117 NSPPKLIMLDDKGQHKETIRIDNWKREHMLQYLREKVKPTSAS 159


>gb|ABK93787.1| unknown [Populus trichocarpa]
          Length = 167

 Score =  183 bits (465), Expect = 1e-44
 Identities = 83/103 (80%), Positives = 97/103 (94%)
 Frame = +2

Query: 2   LVSDCRKCCTEDSDDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQFPSVRIQYVF 181
           LVSDC KCCTEDSDDS+SKITYSGA+LEVC RKLVFYPE+VGFIEEEKDQFP+ ++QY+F
Sbjct: 65  LVSDCLKCCTEDSDDSISKITYSGAILEVCMRKLVFYPEIVGFIEEEKDQFPTFKVQYLF 124

Query: 182 NSPPKLVMLDNDGQYKETIRIDNWKREHLLQFLTEKVKRTSSA 310
           NSPPKL+MLD+ GQ+KETIRIDNWKREH+LQ+L EKVK TS++
Sbjct: 125 NSPPKLIMLDDKGQHKETIRIDNWKREHMLQYLREKVKPTSAS 167


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