BLASTX nr result

ID: Coptis24_contig00018879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018879
         (1458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]   369   1e-99
dbj|BAJ53153.1| JHL23J11.8 [Jatropha curcas]                          335   2e-89
ref|XP_002514782.1| chromatin assembly factor 1, subunit A, puta...   333   7e-89
ref|XP_003551692.1| PREDICTED: uncharacterized protein LOC100802...   316   9e-84
ref|XP_003533580.1| PREDICTED: uncharacterized protein LOC100811...   310   6e-82

>emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]
          Length = 872

 Score =  369 bits (946), Expect = 1e-99
 Identities = 206/410 (50%), Positives = 253/410 (61%), Gaps = 31/410 (7%)
 Frame = +2

Query: 29   NKNLVRGDGSNSEKVLYGWADNTPDDRLYDSSANCCPTYTQICNRTKKLLQFDKSHRPAY 208
            N+ L R +  + EK++ GW + T +DRL+D++A  CP+  Q     K+LLQFDKSHRPA+
Sbjct: 449  NRGLARDNELSIEKIVDGWEETTAEDRLFDTNAYSCPSDAQEVQSNKQLLQFDKSHRPAF 508

Query: 209  YGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEENLMEGNLK 388
            YG    KS ++GPRCP KKD  L                 SLSDCDKD+EEE++ EG LK
Sbjct: 509  YGIWPKKSQIVGPRCPFKKDXDLDYDIDSDEEWEEEDPGESLSDCDKDDEEESVEEGCLK 568

Query: 389  IDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEGDNTRSSPRCNQDLENDEFRALFRQQ 568
             DD++ SEDDF VPDGYLSENEGVQVD METD   +  RSSP C  + E++EF  L RQQ
Sbjct: 569  GDDDE-SEDDFMVPDGYLSENEGVQVDKMETDPTVEEARSSPGCRTEFESEEFCVLLRQQ 627

Query: 569  KHINNLTEHALQKNQPLIISNLMHEKTQLI-AEDLNGTAKLEHMFLQALSLRPFPGSSPI 745
            KH++NLTE AL+KNQPLII NLMHEK  L+ AEDL+GT KLE M LQALS+  FPG   I
Sbjct: 628  KHLHNLTERALRKNQPLIILNLMHEKIPLLMAEDLSGTPKLEQMCLQALSMCAFPGGPLI 687

Query: 746  EILTENNKLDEDEELQELHCXXXXXXXXXXXXXXDKDLPKIVSLIQSCPHRIGKVVESLR 925
            EI   N+  DED+E    +               D DLPKIV+ IQ+C   I K+VESL+
Sbjct: 688  EISVTNDLQDEDKEACLSNSRSSTTPVSTGMAIVDSDLPKIVATIQACTQGINKLVESLQ 747

Query: 926  RSFPDVPKSHLKSKVQEISEFVDNRW------------------------------KVKK 1015
              FP +PKS L++KV+EIS+FVDNRW                              KVKK
Sbjct: 748  LKFPAIPKSQLRNKVREISDFVDNRWQGQDPPRHSYQAVISIELYAPLSRLFMAMSKVKK 807

Query: 1016 EVLGKLGFSISPGKSIENSRGIATFFSKRCLPPTGGPMKTDETSPQQCCK 1165
            +VL KLG SISP K    ++ IA FFSKRCLPP+       +TSPQQ  K
Sbjct: 808  DVLHKLGLSISPEKG-GRTKSIAAFFSKRCLPPSNRISGPSKTSPQQTQK 856


>dbj|BAJ53153.1| JHL23J11.8 [Jatropha curcas]
          Length = 846

 Score =  335 bits (858), Expect = 2e-89
 Identities = 190/372 (51%), Positives = 237/372 (63%), Gaps = 5/372 (1%)
 Frame = +2

Query: 65   EKVLYGWADNTPDDRL----YDSSANCCPTYTQICNRTKKLLQFDKSHRPAYYGTMSVKS 232
            EK+   W + + DDRL     +SS N      +   R KKLLQFDKSHRPA+YG    KS
Sbjct: 465  EKLESEWGEQSSDDRLCATNLESSLN-----DKKWKRRKKLLQFDKSHRPAFYGIWPKKS 519

Query: 233  DVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEENLMEGNLKIDDEDGSE 412
             V+GPR P +K+P L                 SLSDCDKD+EE++L EG  K DDE+ SE
Sbjct: 520  HVVGPRHPFRKEPDLDYDVDSDEEWEEEDPGESLSDCDKDDEEQSLEEGCSK-DDEEESE 578

Query: 413  DDFFVPDGYLSENEGVQVDSMETDTEGDNTRSSPRCNQDLENDEFRALFRQQKHINNLTE 592
            D FFVPDGYLSENEGVQVD MET+   +  R SP   QD E++EF  L +QQK++NN+TE
Sbjct: 579  DGFFVPDGYLSENEGVQVDRMETELSVEKARGSPSSKQDSESEEFCKLLQQQKYLNNVTE 638

Query: 593  HALQKNQPLIISNLMHEKTQL-IAEDLNGTAKLEHMFLQALSLRPFPGSSPIEILTENNK 769
             AL+KNQPLII NLMHEK  L +AEDL GT+KLE   L+AL +R FPG   +EI T + +
Sbjct: 639  TALRKNQPLIILNLMHEKVPLFVAEDLTGTSKLEWTCLEALRVRKFPGGPSMEISTVDIQ 698

Query: 770  LDEDEELQELHCXXXXXXXXXXXXXXDKDLPKIVSLIQSCPHRIGKVVESLRRSFPDVPK 949
             +  E     +               + D+P +VS IQSC   I KVV+SL++ FP V K
Sbjct: 699  AEAREACVS-NGKTNSTHVSPAAAIPELDMPIVVSTIQSCSQSINKVVDSLQQKFPTVSK 757

Query: 950  SHLKSKVQEISEFVDNRWKVKKEVLGKLGFSISPGKSIENSRGIATFFSKRCLPPTGGPM 1129
            S L++KV+EIS+FVDNRW+VKKEVL ++G SISP KS      I+TFFSKRCLPPTG  M
Sbjct: 758  SQLRNKVREISDFVDNRWQVKKEVLNEVGISISPRKSRGRMPNISTFFSKRCLPPTGKSM 817

Query: 1130 KTDETSPQQCCK 1165
              +E SP+   K
Sbjct: 818  NPNENSPESSLK 829


>ref|XP_002514782.1| chromatin assembly factor 1, subunit A, putative [Ricinus communis]
            gi|223545833|gb|EEF47336.1| chromatin assembly factor 1,
            subunit A, putative [Ricinus communis]
          Length = 823

 Score =  333 bits (854), Expect = 7e-89
 Identities = 189/379 (49%), Positives = 240/379 (63%), Gaps = 4/379 (1%)
 Frame = +2

Query: 29   NKNLVRGDGSNSEKVLYGWADNTPDDRLYDSSANCCPTYTQICNRT---KKLLQFDKSHR 199
            N++L   D S+ EK++ GW + + DDR      +C         R    K+LLQFDKSHR
Sbjct: 438  NRDLAHDDESSVEKLVSGW-EQSSDDR------SCVMNLESSDARKIQRKQLLQFDKSHR 490

Query: 200  PAYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEENLMEG 379
            PA+YG    KS V+GPR P +K+P L                 SLSDCDKD+EE++L EG
Sbjct: 491  PAFYGIWPKKSHVVGPRHPFRKEPDLDYDVDSDEEWEEEDPGESLSDCDKDDEEQSLEEG 550

Query: 380  NLKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEGDNTRSSPRCNQDLENDEFRALF 559
             LK DDED SED FFVPDGYLSENEGV+VD +ETD   D  R +P C Q+LEN+EFR L 
Sbjct: 551  CLK-DDEDESEDGFFVPDGYLSENEGVEVDRLETDLSVDEARGTPSCKQELENEEFRTLL 609

Query: 560  RQQKHINNLTEHALQKNQPLIISNLMHEKTQL-IAEDLNGTAKLEHMFLQALSLRPFPGS 736
            + QK++NNLTE AL+KNQPLII NLMHEK  L  A+DL GT K E M L+ALS+R  PG 
Sbjct: 610  QWQKYLNNLTEIALRKNQPLIILNLMHEKDPLSAAKDLTGTFKSEKMCLEALSMRMNPGG 669

Query: 737  SPIEILTENNKLDEDEELQELHCXXXXXXXXXXXXXXDKDLPKIVSLIQSCPHRIGKVVE 916
             P+EI +  + L ED++                    + D+P +VS IQS  H I KVVE
Sbjct: 670  LPVEI-SVVDMLAEDQDACLSIVKASNTHISAVTTIQESDMPIVVSAIQSGSHSINKVVE 728

Query: 917  SLRRSFPDVPKSHLKSKVQEISEFVDNRWKVKKEVLGKLGFSISPGKSIENSRGIATFFS 1096
             L++ FP V KS +++KV+EIS+FVDNRW+VKKE+L K+G SISP K     + I+ FFS
Sbjct: 729  LLQQKFPTVSKSQIRNKVREISDFVDNRWQVKKEILDKVGISISPEKGGGRMQNISKFFS 788

Query: 1097 KRCLPPTGGPMKTDETSPQ 1153
            KRCLPP    +  + TSP+
Sbjct: 789  KRCLPPAAESINPEATSPE 807


>ref|XP_003551692.1| PREDICTED: uncharacterized protein LOC100802884 [Glycine max]
          Length = 838

 Score =  316 bits (810), Expect = 9e-84
 Identities = 177/331 (53%), Positives = 216/331 (65%)
 Frame = +2

Query: 158  NRTKKLLQFDKSHRPAYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLS 337
            +R ++LLQFDKSHRPA+YG    KS V+GPR PL+KDP L                 SLS
Sbjct: 493  SRGRQLLQFDKSHRPAFYGVWPAKSHVVGPRHPLRKDPSLDYDVSSDEEWEEEEPGESLS 552

Query: 338  DCDKDEEEENLMEGNLKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEGDNTRSSPR 517
            DCDKDEEE    E   K D+E  SED FFVPDGYLSE+EG QVD ME D + D   SSP 
Sbjct: 553  DCDKDEEE--CQEECTKSDEE--SEDGFFVPDGYLSEDEGAQVDRMEIDDDIDGADSSPS 608

Query: 518  CNQDLENDEFRALFRQQKHINNLTEHALQKNQPLIISNLMHEKTQLIAEDLNGTAKLEHM 697
            C  D+E++EF AL RQQK++NNLTEHAL+KNQPLIISNL+++K      +++GT KLE M
Sbjct: 609  CKNDIESEEFCALLRQQKYLNNLTEHALRKNQPLIISNLINDKDLSSDHNISGTPKLEQM 668

Query: 698  FLQALSLRPFPGSSPIEILTENNKLDEDEELQELHCXXXXXXXXXXXXXXDKDLPKIVSL 877
             LQALS+   PG S IEI  +  + DED+E+                   D DLP IV+ 
Sbjct: 669  CLQALSMYVIPGISCIEIYVDKMQ-DEDQEVCLSTGKSGASPISGVAVIPDSDLPIIVTT 727

Query: 878  IQSCPHRIGKVVESLRRSFPDVPKSHLKSKVQEISEFVDNRWKVKKEVLGKLGFSISPGK 1057
            IQSC   + KV+ SL++ FP V KS LK+KV+E+S++VDNR +VKKEVL KLG ++ P K
Sbjct: 728  IQSCSQGMNKVLVSLQQKFPSVSKSLLKNKVREVSDYVDNRLQVKKEVLDKLGSAVKPEK 787

Query: 1058 SIENSRGIATFFSKRCLPPTGGPMKTDETSP 1150
            S    R IA FFSKRCLPPTG   K  ETSP
Sbjct: 788  SSGGPRSIAAFFSKRCLPPTGEGSKPGETSP 818


>ref|XP_003533580.1| PREDICTED: uncharacterized protein LOC100811035 [Glycine max]
          Length = 844

 Score =  310 bits (794), Expect = 6e-82
 Identities = 175/338 (51%), Positives = 217/338 (64%)
 Frame = +2

Query: 137  PTYTQICNRTKKLLQFDKSHRPAYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXX 316
            P  T+  +R ++LLQFDKSHRPA+YG    KS V+G R PL+KDP L             
Sbjct: 493  PPDTKKYSRGRQLLQFDKSHRPAFYGVWPAKSHVVGARHPLRKDPSLDYEVSSDEEWEEE 552

Query: 317  XXXXSLSDCDKDEEEENLMEGNLKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEGD 496
                SLSDCDKDEEE    E   K D+E  SED FFVPDGYLSE+EG QVD M+ D + +
Sbjct: 553  EPGESLSDCDKDEEE--CQEECTKSDEE--SEDGFFVPDGYLSEDEGAQVDRMQIDDDIE 608

Query: 497  NTRSSPRCNQDLENDEFRALFRQQKHINNLTEHALQKNQPLIISNLMHEKTQLIAEDLNG 676
               SSP C  D+E +EF AL RQQK++NNLTEHAL+KNQPLIISNL+++K      +++G
Sbjct: 609  GADSSPSCKNDIEIEEFCALLRQQKYLNNLTEHALRKNQPLIISNLINDKDLSSDHNISG 668

Query: 677  TAKLEHMFLQALSLRPFPGSSPIEILTENNKLDEDEELQELHCXXXXXXXXXXXXXXDKD 856
            T KLE M LQ LS+   PG S IEI +E+   DED+E+                   D D
Sbjct: 669  TPKLEQMCLQVLSMYVIPGISCIEI-SEDKMQDEDQEVCLSTGKGVASLISGVAVIPDSD 727

Query: 857  LPKIVSLIQSCPHRIGKVVESLRRSFPDVPKSHLKSKVQEISEFVDNRWKVKKEVLGKLG 1036
            LP IV+ IQSC   + KV+ SL++ FP V KS LK+KV+E+S++VDNR +VKKEVL KLG
Sbjct: 728  LPIIVTTIQSCSQGMNKVLVSLQQKFPSVSKSLLKNKVREVSDYVDNRLQVKKEVLDKLG 787

Query: 1037 FSISPGKSIENSRGIATFFSKRCLPPTGGPMKTDETSP 1150
             ++ P KS    + IA FFSKRCLPPTG   K  ETSP
Sbjct: 788  LAVKPEKSSVGPKSIAAFFSKRCLPPTGEGAKPGETSP 825


Top