BLASTX nr result

ID: Coptis24_contig00018868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018868
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20806.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 3...    92   3e-17
emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]    92   3e-17
ref|XP_002889221.1| predicted protein [Arabidopsis lyrata subsp....    82   4e-14
gb|AAC17071.1| Similar to protein serine/threonine kinase NPK15 ...    82   6e-14

>emb|CBI20806.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  100 bits (250), Expect = 1e-19
 Identities = 49/61 (80%), Positives = 53/61 (86%)
 Frame = -2

Query: 221 LREREREMWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKL 42
           LRE  REMWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKL
Sbjct: 398 LRESPREMWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKL 457

Query: 41  K 39
           K
Sbjct: 458 K 458


>ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 796

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/54 (81%), Positives = 48/54 (88%)
 Frame = -2

Query: 200 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLK 39
           MWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKLK
Sbjct: 1   MWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLK 54


>emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]
          Length = 768

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/54 (81%), Positives = 48/54 (88%)
 Frame = -2

Query: 200 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLK 39
           MWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKLK
Sbjct: 1   MWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLK 54


>ref|XP_002889221.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335062|gb|EFH65480.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 752

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
 Frame = -2

Query: 200 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLKAMTS-- 27
           MWL K N  KKE G+G VAVAIDKDKGSQHALKW ID++  RGQ++ LIHV  ++ +S  
Sbjct: 1   MWLPKANGAKKETGSGSVAVAIDKDKGSQHALKWTIDNLASRGQTISLIHVLSRSHSSSD 60

Query: 26  -VAGTPRNR 3
              GTP+ R
Sbjct: 61  LEEGTPQQR 69


>gb|AAC17071.1| Similar to protein serine/threonine kinase NPK15 gb|D31737 from
           Nicotiana tabacum [Arabidopsis thaliana]
          Length = 772

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
 Frame = -2

Query: 200 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLKAMTS-- 27
           MWL K N  KKE G+G VAVAIDKDKGSQHALKW ID++  RGQ++ LIHV  ++ +S  
Sbjct: 1   MWLPKANGAKKETGSGSVAVAIDKDKGSQHALKWTIDNLASRGQTISLIHVLCRSHSSSD 60

Query: 26  -VAGTPRNR 3
              GTP+ +
Sbjct: 61  LEEGTPQQK 69


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