BLASTX nr result
ID: Coptis24_contig00018868
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018868 (255 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20806.3| unnamed protein product [Vitis vinifera] 100 1e-19 ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 3... 92 3e-17 emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera] 92 3e-17 ref|XP_002889221.1| predicted protein [Arabidopsis lyrata subsp.... 82 4e-14 gb|AAC17071.1| Similar to protein serine/threonine kinase NPK15 ... 82 6e-14 >emb|CBI20806.3| unnamed protein product [Vitis vinifera] Length = 1126 Score = 100 bits (250), Expect = 1e-19 Identities = 49/61 (80%), Positives = 53/61 (86%) Frame = -2 Query: 221 LREREREMWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKL 42 LRE REMWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKL Sbjct: 398 LRESPREMWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKL 457 Query: 41 K 39 K Sbjct: 458 K 458 >ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera] Length = 796 Score = 92.4 bits (228), Expect = 3e-17 Identities = 44/54 (81%), Positives = 48/54 (88%) Frame = -2 Query: 200 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLK 39 MWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKLK Sbjct: 1 MWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLK 54 >emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera] Length = 768 Score = 92.4 bits (228), Expect = 3e-17 Identities = 44/54 (81%), Positives = 48/54 (88%) Frame = -2 Query: 200 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLK 39 MWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKLK Sbjct: 1 MWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLK 54 >ref|XP_002889221.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335062|gb|EFH65480.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 752 Score = 82.4 bits (202), Expect = 4e-14 Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 3/69 (4%) Frame = -2 Query: 200 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLKAMTS-- 27 MWL K N KKE G+G VAVAIDKDKGSQHALKW ID++ RGQ++ LIHV ++ +S Sbjct: 1 MWLPKANGAKKETGSGSVAVAIDKDKGSQHALKWTIDNLASRGQTISLIHVLSRSHSSSD 60 Query: 26 -VAGTPRNR 3 GTP+ R Sbjct: 61 LEEGTPQQR 69 >gb|AAC17071.1| Similar to protein serine/threonine kinase NPK15 gb|D31737 from Nicotiana tabacum [Arabidopsis thaliana] Length = 772 Score = 81.6 bits (200), Expect = 6e-14 Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 3/69 (4%) Frame = -2 Query: 200 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLKAMTS-- 27 MWL K N KKE G+G VAVAIDKDKGSQHALKW ID++ RGQ++ LIHV ++ +S Sbjct: 1 MWLPKANGAKKETGSGSVAVAIDKDKGSQHALKWTIDNLASRGQTISLIHVLCRSHSSSD 60 Query: 26 -VAGTPRNR 3 GTP+ + Sbjct: 61 LEEGTPQQK 69