BLASTX nr result

ID: Coptis24_contig00018862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018862
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519611.1| Stomatin-1, putative [Ricinus communis] gi|2...   104   1e-20
ref|XP_002276800.1| PREDICTED: stomatin-like protein 2 [Vitis vi...   103   2e-20
ref|XP_002867495.1| band 7 family protein [Arabidopsis lyrata su...   100   2e-19
ref|NP_001242268.1| uncharacterized protein LOC100776545 [Glycin...   100   4e-19
ref|XP_004137149.1| PREDICTED: uncharacterized protein C16G5.07c...    99   8e-19

>ref|XP_002519611.1| Stomatin-1, putative [Ricinus communis] gi|223541201|gb|EEF42756.1|
           Stomatin-1, putative [Ricinus communis]
          Length = 405

 Score =  104 bits (259), Expect = 1e-20
 Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 3/117 (2%)
 Frame = -1

Query: 619 LSEAIKTNGGVEAASLRIAEQYIHAFGQIAQKGTTMLLPSTAANPASMMAQAMSIYKTMI 440
           +S A+K NGG+EAASL+IAEQY+ AFG IA+KGTTMLLPS   NPA++MAQA+++YK+M+
Sbjct: 287 VSHALKGNGGIEAASLKIAEQYVQAFGNIAKKGTTMLLPSATDNPANLMAQALTMYKSML 346

Query: 439 GG-SGDGAGESTHSGLLDTKRRDGSSETKEGDSKSAAKSN--SIIGEPVFSLQNNKK 278
              S D + ES+   L++  +    S   + DS + A +N  S    P FSLQ  +K
Sbjct: 347 SNVSSDSSRESSCPELIERMKNSAPSGETKDDSTTVASTNNASSFPGPQFSLQRPRK 403


>ref|XP_002276800.1| PREDICTED: stomatin-like protein 2 [Vitis vinifera]
           gi|297743035|emb|CBI35902.3| unnamed protein product
           [Vitis vinifera]
          Length = 420

 Score =  103 bits (257), Expect = 2e-20
 Identities = 58/127 (45%), Positives = 81/127 (63%), Gaps = 13/127 (10%)
 Frame = -1

Query: 619 LSEAIKTNGGVEAASLRIAEQYIHAFGQIAQKGTTMLLPSTAANPASMMAQAMSIYKTMI 440
           +S A+K +GGVEAASLRIAEQYI AF  IA++GTTMLLPSTA+NPA+M+ QA++IYK+++
Sbjct: 292 VSRALKESGGVEAASLRIAEQYIQAFSMIAKEGTTMLLPSTASNPANMIGQALTIYKSLV 351

Query: 439 GG-SGDGAGESTHSGLLDTKRRDGSSETKEGDSKSAAKSNSI------------IGEPVF 299
           G  +GD   + +H G L   + D SS      S +  + +               G P F
Sbjct: 352 GNVNGDALSKDSHPGSLGNIKGDTSSGETGARSPATPRGSDAAPQTREKADTARFGGPEF 411

Query: 298 SLQNNKK 278
           SLQ+++K
Sbjct: 412 SLQSSRK 418


>ref|XP_002867495.1| band 7 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313331|gb|EFH43754.1| band 7 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 411

 Score =  100 bits (249), Expect = 2e-19
 Identities = 60/123 (48%), Positives = 79/123 (64%), Gaps = 9/123 (7%)
 Frame = -1

Query: 619 LSEAIKTNGGVEAASLRIAEQYIHAFGQIAQKGTTMLLPSTAANPASMMAQAMSIYKTMI 440
           LS+++K  GGVEAASLR+AEQYI AFG IA++GTTMLLPSTA+NPASM+AQA+++YK+++
Sbjct: 286 LSQSLKETGGVEAASLRVAEQYITAFGNIAKEGTTMLLPSTASNPASMIAQALTMYKSLV 345

Query: 439 --GGSGD-----GAGESTHSGL--LDTKRRDGSSETKEGDSKSAAKSNSIIGEPVFSLQN 287
             G S D        E+    L  LD K     S  + G +    +     GEP FSLQ+
Sbjct: 346 INGPSRDHQETQALNETDLEELEDLDEKHISEGSNNRSGSTSFDTEKPGHTGEPRFSLQD 405

Query: 286 NKK 278
             K
Sbjct: 406 RNK 408


>ref|NP_001242268.1| uncharacterized protein LOC100776545 [Glycine max]
           gi|255634995|gb|ACU17856.1| unknown [Glycine max]
          Length = 404

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 59/119 (49%), Positives = 81/119 (68%), Gaps = 5/119 (4%)
 Frame = -1

Query: 619 LSEAIKTNGGVEAASLRIAEQYIHAFGQIAQKGTTMLLPSTAANPASMMAQAMSIYKTMI 440
           +S+++K NGG EAASLRIAEQYI  F  IA++GTTMLLPS+A+NPA+MMAQA+++YK+ +
Sbjct: 284 VSKSLKENGGPEAASLRIAEQYIQVFSNIAKEGTTMLLPSSASNPANMMAQALTMYKSPL 343

Query: 439 G--GSGDGAGESTHSGLLDTKRRDGSSETKEGDSKSAAKSNSI---IGEPVFSLQNNKK 278
           G   SG  +G +  S     +  D SSE K   S +A  ++ I    G+P FSLQ+  K
Sbjct: 344 GNPSSGKLSGTAPPSIAGQLEGNDSSSEVKGESSTNATVTSGIPDYRGKPGFSLQSPPK 402


>ref|XP_004137149.1| PREDICTED: uncharacterized protein C16G5.07c-like [Cucumis sativus]
          Length = 424

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 57/115 (49%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
 Frame = -1

Query: 619 LSEAIKTNGGVEAASLRIAEQYIHAFGQIAQKGTTMLLPSTAANPASMMAQAMSIYKTMI 440
           +S+A+K +GGVEAASLRIAEQYI AF  IA++GTTMLLPS+AANPA+MMAQA++IYK ++
Sbjct: 309 VSQALKDSGGVEAASLRIAEQYIQAFSNIAKEGTTMLLPSSAANPANMMAQALTIYKNLV 368

Query: 439 GGSGDGAGESTHSGLLDTKRRDGSSETKEGDSKSAAKSNSII--GEPVFSLQNNK 281
           G     + E+  SGL +  +    +    GDS    +    +    P FSLQ  K
Sbjct: 369 GNV--SSVEAGTSGLNEGMKESNLAAEIGGDSNQTVRVMDEVEHDRPGFSLQTPK 421


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