BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018856
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              104   8e-21
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    94   9e-18
emb|CCH50966.1| T4.5 [Malus x robusta]                                 94   1e-17
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]    92   3e-17
emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera]    87   1e-15

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  104 bits (259), Expect = 8e-21
 Identities = 47/77 (61%), Positives = 63/77 (81%)
 Frame = -1

Query: 310  ISAIALANNPIFHARTKHVEIDYHYIRELVVNKVVDVQYLCTKDQLADLFTKGLSSQRFQ 131
            IS+I+LA+NP+FH+RTKH+E+DYHY+R+ VV + + V Y+ T DQ AD+FTKGLS+QRFQ
Sbjct: 1298 ISSISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLSTQRFQ 1357

Query: 130  LLLSKLSVISNPFSLKG 80
             L SKL V + P SL+G
Sbjct: 1358 FLASKLPVRARPLSLRG 1374


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/80 (53%), Positives = 60/80 (75%)
 Frame = -1

Query: 310  ISAIALANNPIFHARTKHVEIDYHYIRELVVNKVVDVQYLCTKDQLADLFTKGLSSQRFQ 131
            +S   LA NP+ H+R KHVEIDYH++RE V+ K +DV++L +KDQ+ D+ TK LS+QRF 
Sbjct: 1044 LSTTYLATNPVLHSRAKHVEIDYHFVRERVLPKTLDVRFLPSKDQVVDILTKALSTQRFL 1103

Query: 130  LLLSKLSVISNPFSLKGGIK 71
             L SKL+V+S P  L+G +K
Sbjct: 1104 HLRSKLTVLSRPMCLRGDVK 1123


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 48/80 (60%), Positives = 61/80 (76%)
 Frame = -1

Query: 307  SAIALANNPIFHARTKHVEIDYHYIRELVVNKVVDVQYLCTKDQLADLFTKGLSSQRFQL 128
            S IALA NP+FHARTKHVEIDYHYIRE V+   + VQ++ +  Q+AD+FTK L++ RF  
Sbjct: 1582 SVIALAFNPVFHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTKPLAADRFAA 1641

Query: 127  LLSKLSVISNPFSLKGGIKA 68
            L SKLSV S  FSL+G +K+
Sbjct: 1642 LTSKLSVRSPSFSLRGCVKS 1661


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/80 (53%), Positives = 60/80 (75%)
 Frame = -1

Query: 310 ISAIALANNPIFHARTKHVEIDYHYIRELVVNKVVDVQYLCTKDQLADLFTKGLSSQRFQ 131
           +S   LA NPI H+R KHVEIDYH++RE V+ K +DV++L ++DQ+AD+ TK LS+Q F 
Sbjct: 250 LSTTYLAANPILHSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKSLSTQHFL 309

Query: 130 LLLSKLSVISNPFSLKGGIK 71
            L SKL+V+S P  L+G +K
Sbjct: 310 HLRSKLTVLSRPVCLRGDVK 329


>emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera]
          Length = 787

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/79 (55%), Positives = 57/79 (72%)
 Frame = -1

Query: 304 AIALANNPIFHARTKHVEIDYHYIRELVVNKVVDVQYLCTKDQLADLFTKGLSSQRFQLL 125
           A  LA NPI HA TKH+EID+ +IRE VVNK + V +  +K+QLAD+FTK L +QRFQ L
Sbjct: 703 ATQLAANPILHAXTKHIEIDFXFIRERVVNKSLQVHFTPSKEQLADIFTKPLPTQRFQSL 762

Query: 124 LSKLSVISNPFSLKGGIKA 68
            +KL+ + +P SL G  KA
Sbjct: 763 RTKLTALPSPISLWGDDKA 781