BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018847
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...    56   5e-08
emb|CBI16259.3| unnamed protein product [Vitis vinifera]               56   5e-08
ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subuni...    52   2e-07
ref|XP_004149565.1| PREDICTED: tRNA-splicing endonuclease subuni...    52   2e-07
ref|XP_003625195.1| tRNA-splicing endonuclease subunit Sen2-2 [M...    55   6e-07

>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
           vinifera]
          Length = 242

 Score = 56.2 bits (134), Expect(2) = 5e-08
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -3

Query: 373 VAKTLLVLHIEKNGCDTVSSSCLKHYTVEEQTVTRWSSE 257
           VAKTLLV+HI KNG    +  CLK Y+VEE+T+TRWS+E
Sbjct: 191 VAKTLLVIHINKNGHGATTPLCLKKYSVEERTITRWSAE 229



 Score = 25.8 bits (55), Expect(2) = 5e-08
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -2

Query: 152 TRWSSEQCRE 123
           TRWS+EQCRE
Sbjct: 224 TRWSAEQCRE 233


>emb|CBI16259.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score = 56.2 bits (134), Expect(2) = 5e-08
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -3

Query: 373 VAKTLLVLHIEKNGCDTVSSSCLKHYTVEEQTVTRWSSE 257
           VAKTLLV+HI KNG    +  CLK Y+VEE+T+TRWS+E
Sbjct: 164 VAKTLLVIHINKNGHGATTPLCLKKYSVEERTITRWSAE 202



 Score = 25.8 bits (55), Expect(2) = 5e-08
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -2

Query: 152 TRWSSEQCRE 123
           TRWS+EQCRE
Sbjct: 197 TRWSAEQCRE 206


>ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-2-like [Cucumis
           sativus]
          Length = 281

 Score = 52.4 bits (124), Expect(2) = 2e-07
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = -3

Query: 373 VAKTLLVLHIEKNGCDTVSSSCLKHYTVEEQTVTRWSSE 257
           VAKTLLVL +  NG   VS SCL  Y++EE+TVTRWS E
Sbjct: 234 VAKTLLVLTVNDNGSGFVSPSCLDSYSIEERTVTRWSPE 272



 Score = 27.3 bits (59), Expect(2) = 2e-07
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -2

Query: 152 TRWSSEQCREN 120
           TRWS EQCREN
Sbjct: 267 TRWSPEQCREN 277


>ref|XP_004149565.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-2-like [Cucumis
           sativus]
          Length = 281

 Score = 52.4 bits (124), Expect(2) = 2e-07
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = -3

Query: 373 VAKTLLVLHIEKNGCDTVSSSCLKHYTVEEQTVTRWSSE 257
           VAKTLLVL +  NG   VS SCL  Y++EE+TVTRWS E
Sbjct: 234 VAKTLLVLTVNDNGSGFVSPSCLDSYSIEERTVTRWSPE 272



 Score = 27.3 bits (59), Expect(2) = 2e-07
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -2

Query: 152 TRWSSEQCREN 120
           TRWS EQCREN
Sbjct: 267 TRWSPEQCREN 277


>ref|XP_003625195.1| tRNA-splicing endonuclease subunit Sen2-2 [Medicago truncatula]
           gi|124360132|gb|ABN08148.1| tRNA intron endonuclease,
           catalytic C-terminal [Medicago truncatula]
           gi|355500210|gb|AES81413.1| tRNA-splicing endonuclease
           subunit Sen2-2 [Medicago truncatula]
          Length = 246

 Score = 54.7 bits (130), Expect(2) = 6e-07
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = -3

Query: 376 GVAKTLLVLHIEKNGCDTVSSSCLKHYTVEEQTVTRWSSE 257
           GVAKTLLVL++ KNG +  S  CL +YTVEE+T++RWS E
Sbjct: 200 GVAKTLLVLYVNKNGNNDESLLCLTNYTVEERTISRWSPE 239



 Score = 23.5 bits (49), Expect(2) = 6e-07
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 152 TRWSSEQCRE 123
           +RWS EQCRE
Sbjct: 234 SRWSPEQCRE 243