BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018821
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...    99   4e-19
emb|CBI24149.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methy...    97   1e-18
ref|XP_002451632.1| hypothetical protein SORBIDRAFT_04g004900 [S...    94   9e-18

>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  105 bits (262), Expect = 4e-21
 Identities = 59/127 (46%), Positives = 71/127 (55%), Gaps = 45/127 (35%)
 Frame = +1

Query: 37  LYNSVSMFCVQLMQLEGDAAR--------------------------------------- 99
           LYNSVSMFCV+LMQLE +A R                                       
Sbjct: 36  LYNSVSMFCVRLMQLEEEATRDPSCALDMKKLLETRTNAAIELRRRLGLPSSHTNAYRLV 95

Query: 100 ------LSGLIVDVFEDLDVIASSTAWVEKYKPVITSCIS*IDGINHVKWKPSIDILKEE 261
                 LSGLIVDVF DL VIASS AWVE YKP + +CI+ IDGINH+ W+PS+DILKEE
Sbjct: 96  NSEGDRLSGLIVDVFGDLAVIASSAAWVENYKPEVEACINRIDGINHINWRPSVDILKEE 155

Query: 262 ALELSDL 282
            +++SD+
Sbjct: 156 GMDVSDM 162


>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 507

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 58/127 (45%), Positives = 69/127 (54%), Gaps = 45/127 (35%)
 Frame = +1

Query: 37  LYNSVSMFCVQLMQLEGDAAR--------------------------------------- 99
           LYNSVSMFCV+LMQ E +A R                                       
Sbjct: 156 LYNSVSMFCVRLMQQEEEATRDPSCALNMEKLLETRIDAAIELRRNLGLPSANTNAYRLV 215

Query: 100 ------LSGLIVDVFEDLDVIASSTAWVEKYKPVITSCIS*IDGINHVKWKPSIDILKEE 261
                 LSGLIVDVF DL VIASS AWVEKYKP + +CIS ID INH+ W+ S+++LKEE
Sbjct: 216 NSEGDRLSGLIVDVFGDLAVIASSAAWVEKYKPQVEACISRIDEINHINWRQSVEMLKEE 275

Query: 262 ALELSDL 282
            L+L+DL
Sbjct: 276 GLDLTDL 282


>emb|CBI24149.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 58/127 (45%), Positives = 69/127 (54%), Gaps = 45/127 (35%)
 Frame = +1

Query: 37  LYNSVSMFCVQLMQLEGDAAR--------------------------------------- 99
           LYNSVSMFCV+LMQ E +A R                                       
Sbjct: 36  LYNSVSMFCVRLMQQEEEATRDPSCALNMEKLLETRIDAAIELRRNLGLPSANTNAYRLV 95

Query: 100 ------LSGLIVDVFEDLDVIASSTAWVEKYKPVITSCIS*IDGINHVKWKPSIDILKEE 261
                 LSGLIVDVF DL VIASS AWVEKYKP + +CIS ID INH+ W+ S+++LKEE
Sbjct: 96  NSEGDRLSGLIVDVFGDLAVIASSAAWVEKYKPQVEACISRIDEINHINWRQSVEMLKEE 155

Query: 262 ALELSDL 282
            L+L+DL
Sbjct: 156 GLDLTDL 162


>ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Cucumis sativus] gi|449475849|ref|XP_004154569.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 439

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 57/127 (44%), Positives = 69/127 (54%), Gaps = 45/127 (35%)
 Frame = +1

Query: 37  LYNSVSMFCVQLMQLEGDAAR--------------------------------------- 99
           LYNSVSMF V+LMQLE +AAR                                       
Sbjct: 88  LYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMIETRVHTARELRKNLGLPSASTNAYRLV 147

Query: 100 ------LSGLIVDVFEDLDVIASSTAWVEKYKPVITSCIS*IDGINHVKWKPSIDILKEE 261
                 LSGLI+DVF DL V+ASS AWVEKYK  I  C+  I+ INHVKW+PS+DILKEE
Sbjct: 148 NSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEE 207

Query: 262 ALELSDL 282
            +++S+L
Sbjct: 208 GIDVSEL 214


>ref|XP_002451632.1| hypothetical protein SORBIDRAFT_04g004900 [Sorghum bicolor]
           gi|241931463|gb|EES04608.1| hypothetical protein
           SORBIDRAFT_04g004900 [Sorghum bicolor]
          Length = 460

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 55/126 (43%), Positives = 68/126 (53%), Gaps = 45/126 (35%)
 Frame = +1

Query: 37  LYNSVSMFCVQLMQLEGDAAR--------------------------------------- 99
           LYNSVSMFCV+LMQLE DA R                                       
Sbjct: 111 LYNSVSMFCVRLMQLEEDAIRDPTCALNMERLLEARISSAVDLRRSLGLPSADTNAYRLI 170

Query: 100 ------LSGLIVDVFEDLDVIASSTAWVEKYKPVITSCIS*IDGINHVKWKPSIDILKEE 261
                 LSGLIVD+F D+ VIASS AWVEKY+  I   +S ++GI+H+KW+PS DILKEE
Sbjct: 171 NSEGDRLSGLIVDIFADVAVIASSAAWVEKYRQEIQFLVSKVNGISHIKWRPSADILKEE 230

Query: 262 ALELSD 279
            L++S+
Sbjct: 231 GLDISE 236