BLASTX nr result

ID: Coptis24_contig00018820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018820
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568761.1| uncharacterized protein [Arabidopsis thaliana] ...   119   9e-25
ref|XP_004148140.1| PREDICTED: uncharacterized protein LOC101211...   117   3e-24
ref|XP_002864115.1| hypothetical protein ARALYDRAFT_495223 [Arab...   115   7e-24
ref|XP_002862983.1| hypothetical protein ARALYDRAFT_497223 [Arab...   115   1e-23
gb|AAM94931.1| unknown protein [Oryza sativa Japonica Group]          113   5e-23

>ref|NP_568761.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758193|dbj|BAB08667.1| unnamed protein product
           [Arabidopsis thaliana] gi|21554099|gb|AAM63179.1|
           unknown [Arabidopsis thaliana]
           gi|26452693|dbj|BAC43429.1| unknown protein [Arabidopsis
           thaliana] gi|28973527|gb|AAO64088.1| unknown protein
           [Arabidopsis thaliana] gi|332008709|gb|AED96092.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 170

 Score =  119 bits (297), Expect = 9e-25
 Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 2/168 (1%)
 Frame = -2

Query: 739 MQKRNPVSGRPTGTDGSDYSYRMVVEPRYMNVAKGKARFRTVFIMQGVIQIVGVLGAFFF 560
           MQ+R P +GRP+GTDGSD+SYRMVV+ RY  V K KAR R +  +Q  I ++G+  AF  
Sbjct: 1   MQQRKPTAGRPSGTDGSDFSYRMVVDSRYTKVTKEKARLRPLIFVQAAIYVIGLSCAFLT 60

Query: 559 PTKDGFFNTLQIAAFILGLMFIVIGKTAVGRSHVTLLSIYCVLSSLATVFCLACTTMN-- 386
            TK    NTL IAA + GL+  +IG+    RS V LL +Y   S++  V  + C   +  
Sbjct: 61  TTKKDEKNTLAIAAAVAGLVCSLIGELGCRRSRVNLLRLYTAASTIVMVLSVFCAVRSRL 120

Query: 385 TFHTHIPEEMQQKAEIFAYMHIVIGAMVEMYQINTSMNLMHNMAPPKR 242
           T           K E+  ++   +GA+V++  I  + +L++NM+PP +
Sbjct: 121 TMEERNSSGTTAKLELAGFICAQLGAVVQILAIIVTGSLVNNMSPPTK 168


>ref|XP_004148140.1| PREDICTED: uncharacterized protein LOC101211693 [Cucumis sativus]
           gi|449499648|ref|XP_004160874.1| PREDICTED:
           uncharacterized protein LOC101231891 [Cucumis sativus]
          Length = 172

 Score =  117 bits (293), Expect = 3e-24
 Identities = 63/170 (37%), Positives = 102/170 (60%), Gaps = 4/170 (2%)
 Frame = -2

Query: 739 MQKRNPVSGRPTGTDGSDYSYRMVVEPRYMNVAKGKARFRTVFIMQGVIQIVGVLGAFFF 560
           M +R   +GRP+GTDGSD+SYRMVV+ RY  VAKGK+RF ++ + Q VIQ+ GV   F  
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHSLILAQVVIQLCGVAYLFLL 60

Query: 559 PTKDGFFNTLQIAAFILGLMFIVIGKTAVGRSHVTLLSIYCVLSSLATVFCLACTTMN-- 386
            +K    + L I++ I G   + IG+     S  + L +Y + SSL+ +  L   +    
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYAIASSLSLLLLLVDVSQGNY 120

Query: 385 TFHT--HIPEEMQQKAEIFAYMHIVIGAMVEMYQINTSMNLMHNMAPPKR 242
           TF +   +     ++ E+F  + I +GA+++++ I+T ++L+ NM+PPKR
Sbjct: 121 TFESIGDLSNWQAKQLELFEMIRISLGALLQIFAISTVISLVSNMSPPKR 170


>ref|XP_002864115.1| hypothetical protein ARALYDRAFT_495223 [Arabidopsis lyrata subsp.
           lyrata] gi|297309950|gb|EFH40374.1| hypothetical protein
           ARALYDRAFT_495223 [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  115 bits (289), Expect = 7e-24
 Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 2/168 (1%)
 Frame = -2

Query: 739 MQKRNPVSGRPTGTDGSDYSYRMVVEPRYMNVAKGKARFRTVFIMQGVIQIVGVLGAFFF 560
           MQ+R P +GRP+GTDGSD+SYRMVV+ RY  V K KAR R +  +Q  I +VG+  AF  
Sbjct: 1   MQQRKPTAGRPSGTDGSDFSYRMVVDSRYTKVTKEKARLRPLIFVQAAIYLVGLSCAFLT 60

Query: 559 PTKDGFFNTLQIAAFILGLMFIVIGKTAVGRSHVTLLSIYCVLSSLATVFCLACTTMN-- 386
            TK    NTL IAA   GL+   IG+    RS V LL +Y   S++  V  + C   +  
Sbjct: 61  TTKKDERNTLAIAAAAAGLVSSFIGELGCRRSRVNLLRLYTAASTIVMVLSVFCAVRSRL 120

Query: 385 TFHTHIPEEMQQKAEIFAYMHIVIGAMVEMYQINTSMNLMHNMAPPKR 242
           T           K E+  ++   +GA+V++  I  + +L++NM+PP +
Sbjct: 121 TMEERNSTGTTAKLELAGFICAQLGAVVQILVIIVTGSLVNNMSPPTK 168


>ref|XP_002862983.1| hypothetical protein ARALYDRAFT_497223 [Arabidopsis lyrata subsp.
           lyrata] gi|297308774|gb|EFH39242.1| hypothetical protein
           ARALYDRAFT_497223 [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  115 bits (287), Expect = 1e-23
 Identities = 66/168 (39%), Positives = 94/168 (55%), Gaps = 2/168 (1%)
 Frame = -2

Query: 739 MQKRNPVSGRPTGTDGSDYSYRMVVEPRYMNVAKGKARFRTVFIMQGVIQIVGVLGAFFF 560
           MQ+R P +GRP+GTDGSD+SYRMVV+ RY  V K KAR R +  +Q  I +VG+  AF  
Sbjct: 1   MQQRKPTAGRPSGTDGSDFSYRMVVDSRYTKVTKEKARLRPLIFVQAAIYLVGLSCAFLT 60

Query: 559 PTKDGFFNTLQIAAFILGLMFIVIGKTAVGRSHVTLLSIYCVLSSLATVFCLACTTMN-- 386
            TK    NTL IAA   GL+   IG+    RS V LL +Y   S++  V  + C   +  
Sbjct: 61  TTKKDERNTLAIAAAAAGLVSSFIGELGCRRSRVNLLRLYTAASTIVMVLSVFCAVRSRL 120

Query: 385 TFHTHIPEEMQQKAEIFAYMHIVIGAMVEMYQINTSMNLMHNMAPPKR 242
           T           K E+  ++    GA+V++  I  + +L++NM+PP +
Sbjct: 121 TMEERNSTGTTAKLELAGFICAQFGAVVQILVIIVTGSLVNNMSPPTK 168


>gb|AAM94931.1| unknown protein [Oryza sativa Japonica Group]
          Length = 292

 Score =  113 bits (282), Expect = 5e-23
 Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 3/169 (1%)
 Frame = -2

Query: 739 MQKRNPVSGRPTGTDGSDYSYRMVVEPRYMNVAKGKARFRTVFIMQGVIQIVGVLGAFFF 560
           MQ+R P SGRP+GTDGSD+SYRMVV+ RY  VA GK+R   + ++Q + Q+ G       
Sbjct: 122 MQQRRPASGRPSGTDGSDFSYRMVVDSRYQRVADGKSRLGRLILVQALHQVAGGALLLLA 181

Query: 559 PTKDGFFNTLQIAAFILGLMFIVIGKTAVGRSHVTLLSIYCVLSSLATVFCLACTTMNTF 380
            +K    N   + +   GL+ IV+G+    R+   LL +Y  LSS+A  F +AC   +  
Sbjct: 182 LSKGAEMNKFAVMSVAAGLLAIVLGEIGRRRTMAVLLRMYTSLSSIAVAFSVACIIRSEL 241

Query: 379 HTHIPEEMQQKA---EIFAYMHIVIGAMVEMYQINTSMNLMHNMAPPKR 242
              I ++  +     E+   + + +G ++++  I T+  L+ NM+PP+R
Sbjct: 242 FFKITKQNTESITSHELLEVVRVALGVLLQLVVIATTTRLLQNMSPPRR 290


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