BLASTX nr result

ID: Coptis24_contig00018811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018811
         (1353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25465.3| unnamed protein product [Vitis vinifera]              219   2e-54
ref|XP_002272219.1| PREDICTED: gibberellin 2-beta-dioxygenase 1-...   219   2e-54
ref|XP_003616656.1| Gibberellin 2-beta-dioxygenase [Medicago tru...   189   1e-45
ref|XP_003519400.1| PREDICTED: uncharacterized protein LOC100785...   187   7e-45
ref|XP_002528301.1| conserved hypothetical protein [Ricinus comm...   181   4e-43

>emb|CBI25465.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  219 bits (557), Expect = 2e-54
 Identities = 133/306 (43%), Positives = 167/306 (54%), Gaps = 3/306 (0%)
 Frame = -3

Query: 1270 MASSAENHQPHSATYGXXXXXXXXXXXXTNCLSTNDAADTXXXXXXXXXXXXXXXXXXXX 1091
            MASSA  H P    YG             + +ST+DAAD                     
Sbjct: 1    MASSA--HTPPPNPYGTTVAPPPTPSTQPSHVSTSDAADAISRLFQRLPPALSLPTRASP 58

Query: 1090 RTTCPPSISFSPQNTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQ 911
            R T PPSISFS QN + L   LS  SQ GFFQL +HPIPSQ           LF+L + Q
Sbjct: 59   RATSPPSISFSDQNLNLLSDLLSFSSQHGFFQLIDHPIPSQLARSAESESLALFDLPRPQ 118

Query: 910  KHQSFSNTWPLGYDEGDDNNNMEEGGPIESFCFDXXXXXXXXXXXXXXXXXXXXXXXXXS 731
            K  SF   WPLG+D  +D    EE G  E+FC +                          
Sbjct: 119  KQHSFPKNWPLGFDADED----EEDGAGEAFCLESSCSTESTHLSLSSLREFTRA----- 169

Query: 730  ELEKVGTDVVEALSSAMGFSKRLKEKDIQFSSLMWVSEGVVGNKQMISGRFYPYIIALQY 551
             +EK+G DV+++L+ A+GF    +    +   LMW+SE V GNK  +SGR YPYII LQY
Sbjct: 170  -MEKLGLDVLDSLARAVGFENPFRSGSNRVCPLMWISEDVPGNKPDLSGRVYPYIIGLQY 228

Query: 550  QITCRKYSVLTDSGWSSVSPQVDSVLVTVGDIAQVWSNGKLKKVRGRPVATSGND---NS 380
            QIT +K+S+L DSGW +VSP+VDSV+VTVGDIAQVWSNGKLKKVRGR V   G++   +S
Sbjct: 229  QITSQKHSLLVDSGWITVSPRVDSVMVTVGDIAQVWSNGKLKKVRGRAVVNRGSEAGKSS 288

Query: 379  RFITMS 362
            R ++M+
Sbjct: 289  RSVSMA 294


>ref|XP_002272219.1| PREDICTED: gibberellin 2-beta-dioxygenase 1-like [Vitis vinifera]
          Length = 382

 Score =  219 bits (557), Expect = 2e-54
 Identities = 133/306 (43%), Positives = 167/306 (54%), Gaps = 3/306 (0%)
 Frame = -3

Query: 1270 MASSAENHQPHSATYGXXXXXXXXXXXXTNCLSTNDAADTXXXXXXXXXXXXXXXXXXXX 1091
            MASSA  H P    YG             + +ST+DAAD                     
Sbjct: 1    MASSA--HTPPPNPYGTTVAPPPTPSTQPSHVSTSDAADAISRLFQRLPPALSLPTRASP 58

Query: 1090 RTTCPPSISFSPQNTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQ 911
            R T PPSISFS QN + L   LS  SQ GFFQL +HPIPSQ           LF+L + Q
Sbjct: 59   RATSPPSISFSDQNLNLLSDLLSFSSQHGFFQLIDHPIPSQLARSAESESLALFDLPRPQ 118

Query: 910  KHQSFSNTWPLGYDEGDDNNNMEEGGPIESFCFDXXXXXXXXXXXXXXXXXXXXXXXXXS 731
            K  SF   WPLG+D  +D    EE G  E+FC +                          
Sbjct: 119  KQHSFPKNWPLGFDADED----EEDGAGEAFCLESSCSTESTHLSLSSLREFTRA----- 169

Query: 730  ELEKVGTDVVEALSSAMGFSKRLKEKDIQFSSLMWVSEGVVGNKQMISGRFYPYIIALQY 551
             +EK+G DV+++L+ A+GF    +    +   LMW+SE V GNK  +SGR YPYII LQY
Sbjct: 170  -MEKLGLDVLDSLARAVGFENPFRSGSNRVCPLMWISEDVPGNKPDLSGRVYPYIIGLQY 228

Query: 550  QITCRKYSVLTDSGWSSVSPQVDSVLVTVGDIAQVWSNGKLKKVRGRPVATSGND---NS 380
            QIT +K+S+L DSGW +VSP+VDSV+VTVGDIAQVWSNGKLKKVRGR V   G++   +S
Sbjct: 229  QITSQKHSLLVDSGWITVSPRVDSVMVTVGDIAQVWSNGKLKKVRGRAVVNRGSEAGKSS 288

Query: 379  RFITMS 362
            R ++M+
Sbjct: 289  RSVSMA 294


>ref|XP_003616656.1| Gibberellin 2-beta-dioxygenase [Medicago truncatula]
            gi|355517991|gb|AES99614.1| Gibberellin
            2-beta-dioxygenase [Medicago truncatula]
          Length = 379

 Score =  189 bits (480), Expect = 1e-45
 Identities = 117/264 (44%), Positives = 152/264 (57%), Gaps = 3/264 (1%)
 Frame = -3

Query: 1087 TTCPPSISFSPQNTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQK 908
            TT PPS+SFS      L   +SS SQLGF QLT+H + S+           LFNLS  QK
Sbjct: 70   TTSPPSLSFSSLTPEKL---ISSISQLGFIQLTDHSVSSKLANLAESESLKLFNLSHDQK 126

Query: 907  HQSFSNTWPLGYDEGDDNNNMEEGGPIESFCFDXXXXXXXXXXXXXXXXXXXXXXXXXSE 728
               F   WP GY EGD++N+ E+   +ESF F                            
Sbjct: 127  ESFFPQNWPFGY-EGDNDNDEEK--LVESFRFQFDSLCSTESNQIKLESLSEFACA---- 179

Query: 727  LEKVGTDVVEALSSAMGFSKRLKEKDIQFSSLMWVSEGVVGNKQMISGRFYPYIIALQYQ 548
            LEK+G ++++ L + +G    + +   +FSS+MWVSE + GNK    G FYP+I+ LQYQ
Sbjct: 180  LEKLGLNIIDVLMNGLGVENPVGDDSNRFSSIMWVSECLPGNKPGSMGGFYPFIVGLQYQ 239

Query: 547  ITCRKYSVLTDS-GWSSVSPQVDSVLVTVGDIAQVWSNGKLKKVRGRPV-ATSGNDN-SR 377
            I C+KYS+L+DS GW SV P VDS+LVTVGD+AQVWSNGKLKKVRGRP+ A  G++N S 
Sbjct: 240  IRCQKYSLLSDSGGWVSVLPHVDSILVTVGDVAQVWSNGKLKKVRGRPIMAALGDENDSS 299

Query: 376  FITMSXXXXXXXXXXXTISPFLPV 305
             ITMS            ++P LP+
Sbjct: 300  CITMS--LLITLPLESNVAPLLPI 321


>ref|XP_003519400.1| PREDICTED: uncharacterized protein LOC100785042 [Glycine max]
          Length = 360

 Score =  187 bits (474), Expect = 7e-45
 Identities = 114/263 (43%), Positives = 148/263 (56%), Gaps = 1/263 (0%)
 Frame = -3

Query: 1084 TCPPSISFSPQNTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQKH 905
            TCPP +S        L+  LS  S+LG+ QLT+H +PS+           LF+LS+ QK 
Sbjct: 61   TCPPCLS--------LNDVLSCVSKLGYAQLTDHSVPSELANSAESEALALFDLSQDQKQ 112

Query: 904  QSFSNTWPLGYDEGDDNNNMEEGGPIESFCFDXXXXXXXXXXXXXXXXXXXXXXXXXSEL 725
              F   WPLGY   +D    +E G  +SF FD                          EL
Sbjct: 113  SLFPKNWPLGYGNDEDE---DEDGVADSFRFDSACSTESSELALFSLRKFAR------EL 163

Query: 724  EKVGTDVVEALSSAMGFSKRLKEKDIQFSSLMWVSEGVVGNKQMISGRFYPYIIALQYQI 545
            EK+G  +V+ L+  +G    L +   +  S+MWVSE + GNK   SG FYP++I LQYQI
Sbjct: 164  EKLGLMIVDELTKDLGCENPLGDDPTRVCSVMWVSESLPGNK---SGGFYPFVIGLQYQI 220

Query: 544  TCRKYSVLTDSGWSSVSPQVDSVLVTVGDIAQVWSNGKLKKVRGRPVATSGNDN-SRFIT 368
              +KYS+L+DSGW SV P VDS+LVT GDIAQVWSNGKLKKVRGRP+AT G++N SR IT
Sbjct: 221  RNQKYSLLSDSGWVSVLPHVDSILVTFGDIAQVWSNGKLKKVRGRPMATVGDENGSRCIT 280

Query: 367  MSXXXXXXXXXXXTISPFLPVIS 299
            MS            ++P LP ++
Sbjct: 281  MS--LLITLPTDSRVAPLLPKVT 301


>ref|XP_002528301.1| conserved hypothetical protein [Ricinus communis]
            gi|223532256|gb|EEF34059.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 435

 Score =  181 bits (459), Expect = 4e-43
 Identities = 117/267 (43%), Positives = 145/267 (54%), Gaps = 2/267 (0%)
 Frame = -3

Query: 1087 TTCPPSISFSPQNTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQK 908
            TT PP IS S Q ++  D  LS+ SQ GFFQL  H IPS            LF L+K +K
Sbjct: 119  TTSPPLISLSDQTSA--DHLLSACSQHGFFQLHKHNIPSHLANSAEVESLSLFKLAKDKK 176

Query: 907  HQSFSNTWPLGYDEGDDNNNMEEGGPIESFCFDXXXXXXXXXXXXXXXXXXXXXXXXXSE 728
               F   WPLG+++ D+  N E      SF  D                           
Sbjct: 177  ESYFPKNWPLGFNDDDEEGNGE------SFWLDGDCSASTELPTELSLSSLRELTRG--- 227

Query: 727  LEKVGTDVVEALSSAMGFSKRLKEKDIQFSSLMWVSEGVVGNK-QMISGRFYPYIIALQY 551
            LEK+G + +E LS A+GF    K    + SS+M V EG  G+K   ISG FYPY++ LQY
Sbjct: 228  LEKLGLEAMEMLSKAVGFENPFKAYPTRLSSMMSVHEGSYGDKPDHISGGFYPYVVGLQY 287

Query: 550  QITCRKYSVLTDSGWSSVSPQVDSVLVTVGDIAQVWSNGKLKKVRGRPVATSGN-DNSRF 374
            +I  RKY +L DSGW +V PQVDSVLVTVGDIAQVWSNGKLK+VRGRP+   G+  +S  
Sbjct: 288  EIRSRKYWLLADSGWVAVVPQVDSVLVTVGDIAQVWSNGKLKRVRGRPLPCMGDGKDSSC 347

Query: 373  ITMSXXXXXXXXXXXTISPFLPVISSH 293
            ITM+           TISP LP + +H
Sbjct: 348  ITMT--LLLTLPTETTISPLLPELDTH 372


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