BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018804
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|2...   132   5e-29
ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus com...   115   5e-24
ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 prote...   110   1e-22
emb|CBI25438.3| unnamed protein product [Vitis vinifera]              110   1e-22
emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]   108   6e-22

>ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|222851997|gb|EEE89544.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  132 bits (331), Expect = 5e-29
 Identities = 81/185 (43%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
 Frame = -1

Query: 560 DSYQPDAFLYDRFDRFDIEGDDETQTNFTTQDNSIIP-SLIPSPLHHEVPQQVDEIQDLF 384
           DSYQ DA  Y+RF+RFDIEGD+ETQ NFT+ D+  IP +LIPSP   +  Q+ +E QD  
Sbjct: 169 DSYQADADAYNRFERFDIEGDEETQVNFTSADHMDIPTTLIPSPHEQDEAQRAEENQDHH 228

Query: 383 PEPQNNHVSPEQKNSNRSDESREEAQQPQPNEQXXXXXXXXXXXXAGHPQLDYEQTIIPG 204
           PE Q N  S E K + +  + R   ++    +                  +DYEQTIIPG
Sbjct: 229 PEFQVNQQSNECKGARQDQQKRRPIKRKTRRQ--------------ATTTVDYEQTIIPG 274

Query: 203 PLYQSWLQKTADIVTNRG-GTKRRIIPISTMKTAHLMELPPGAXXXXXXXXXSTEIHYPR 27
            +YQSWLQ  +DIV+ RG   K R+  +ST K ++LMELPP           + EI+YP 
Sbjct: 275 HVYQSWLQNASDIVSRRGRKRKARMGIMSTTKISNLMELPP---TVLIDDNGNREIYYPA 331

Query: 26  PLLDL 12
           PLL+L
Sbjct: 332 PLLEL 336


>ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223539902|gb|EEF41480.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 613

 Score =  115 bits (288), Expect = 5e-24
 Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 5/191 (2%)
 Frame = -1

Query: 560 DSYQPDAFLYDRFDRFDIEGDDETQTNFTTQDNSIIP-SLIPSPLHHEVPQQVDEIQDLF 384
           D YQ    +Y+R++RFDIE ++ETQ NFT+ ++  IP SLIPSP   +       +Q + 
Sbjct: 169 DLYQTHTEMYNRYERFDIE-EEETQLNFTSGEHVEIPTSLIPSPPKQDEAPSAYLVQLMK 227

Query: 383 PEPQNNHVSPEQKNSNRSD-ES--REEAQQPQPNEQXXXXXXXXXXXXAGHPQLDYEQTI 213
            +   N    EQKN++ +D ES  +E+ Q+  P ++               P +DYEQTI
Sbjct: 228 SKTVKNK-PVEQKNASLTDLESMMKEDQQRKGPTKKRIKRQAT--------PAMDYEQTI 278

Query: 212 IPGPLYQSWLQKTADIVTNRG-GTKRRIIPISTMKTAHLMELPPGAXXXXXXXXXSTEIH 36
           IPGP YQSWLQ  +DIV+ RG   K R   +S MKTA+LMELPP           + EI+
Sbjct: 279 IPGPTYQSWLQNASDIVSRRGRKRKARRDIMSKMKTANLMELPPLVLIDDLSANANGEIY 338

Query: 35  YPRPLLDLHLR 3
           YP PLL+L ++
Sbjct: 339 YPAPLLELWMK 349


>ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 protein 1-like [Vitis
           vinifera]
          Length = 608

 Score =  110 bits (276), Expect = 1e-22
 Identities = 79/190 (41%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
 Frame = -1

Query: 560 DSYQPDAFLYDRFDRFDIEGDDETQTNFTTQDNSIIPS-LIPSPLH---HEVPQQVDEIQ 393
           +SYQ D  L +R +RF  E D E Q NFT  +   IPS LIPSP H   H+     DEIQ
Sbjct: 172 NSYQADTNLNNRDERF--EEDGEIQLNFTPAEQ--IPSTLIPSPSHQNEHQKGDPADEIQ 227

Query: 392 DLFPEPQNNHVSPEQKNSNRSDESREEAQQPQPNEQXXXXXXXXXXXXAGHPQLDYEQTI 213
           DL PE Q N    E K  N+S+       Q QP +                  +D EQ I
Sbjct: 228 DLHPENQVNQQPDEHKEVNQSE-------QDQPRQGIIRKRGRRPAAFV----MDDEQII 276

Query: 212 IPGPLYQSWLQKTADIVTNRGGTKRRIIPISTMKTAHLMELPPGAXXXXXXXXXSTEIHY 33
           IPG LYQSWLQ  ++IV  RG  ++ ++PI  +K A+LMELPP           + EI Y
Sbjct: 277 IPGNLYQSWLQDPSNIVARRGKRRKNLMPI--VKIANLMELPPSTLIDGILTSGTGEIQY 334

Query: 32  PRPLLDLHLR 3
           P PLL+L +R
Sbjct: 335 PAPLLELWMR 344


>emb|CBI25438.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  110 bits (276), Expect = 1e-22
 Identities = 79/190 (41%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
 Frame = -1

Query: 560 DSYQPDAFLYDRFDRFDIEGDDETQTNFTTQDNSIIPS-LIPSPLH---HEVPQQVDEIQ 393
           +SYQ D  L +R +RF  E D E Q NFT  +   IPS LIPSP H   H+     DEIQ
Sbjct: 185 NSYQADTNLNNRDERF--EEDGEIQLNFTPAEQ--IPSTLIPSPSHQNEHQKGDPADEIQ 240

Query: 392 DLFPEPQNNHVSPEQKNSNRSDESREEAQQPQPNEQXXXXXXXXXXXXAGHPQLDYEQTI 213
           DL PE Q N    E K  N+S+       Q QP +                  +D EQ I
Sbjct: 241 DLHPENQVNQQPDEHKEVNQSE-------QDQPRQGIIRKRGRRPAAFV----MDDEQII 289

Query: 212 IPGPLYQSWLQKTADIVTNRGGTKRRIIPISTMKTAHLMELPPGAXXXXXXXXXSTEIHY 33
           IPG LYQSWLQ  ++IV  RG  ++ ++PI  +K A+LMELPP           + EI Y
Sbjct: 290 IPGNLYQSWLQDPSNIVARRGKRRKNLMPI--VKIANLMELPPSTLIDGILTSGTGEIQY 347

Query: 32  PRPLLDLHLR 3
           P PLL+L +R
Sbjct: 348 PAPLLELWMR 357


>emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]
          Length = 597

 Score =  108 bits (270), Expect = 6e-22
 Identities = 78/190 (41%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
 Frame = -1

Query: 560 DSYQPDAFLYDRFDRFDIEGDDETQTNFTTQDNSIIPS-LIPSPLH---HEVPQQVDEIQ 393
           +SYQ D  L +R +RF  E D E Q NFT  +   IPS LIPSP H   H+     DEIQ
Sbjct: 166 NSYQADTNLNNRDERF--EEDGEIQLNFTPAEQ--IPSTLIPSPSHQNEHQKGXPADEIQ 221

Query: 392 DLFPEPQNNHVSPEQKNSNRSDESREEAQQPQPNEQXXXXXXXXXXXXAGHPQLDYEQTI 213
           DL PE Q N    E K  N+S+       Q QP +                  +D EQ I
Sbjct: 222 DLHPENQVNQQPDEHKEVNQSE-------QDQPRQGIIRKRGRRPAAFV----MDDEQII 270

Query: 212 IPGPLYQSWLQKTADIVTNRGGTKRRIIPISTMKTAHLMELPPGAXXXXXXXXXSTEIHY 33
           IPG LYQSWLQ  ++IV  RG  ++ ++P   +K A+LMELPP           + EI Y
Sbjct: 271 IPGNLYQSWLQDPSNIVARRGKRRKNLMP--XVKIANLMELPPSTLIDGILTSGTGEIQY 328

Query: 32  PRPLLDLHLR 3
           P PLL+L +R
Sbjct: 329 PAPLLELWMR 338