BLASTX nr result
ID: Coptis24_contig00018789
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018789 (429 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 ref|XP_002516571.1| conserved hypothetical protein [Ricinus comm... 74 9e-12 ref|XP_002878880.1| hypothetical protein ARALYDRAFT_481426 [Arab... 73 2e-11 emb|CAN61520.1| hypothetical protein VITISV_033969 [Vitis vinifera] 69 4e-10 ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267... 69 5e-10 >ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|222855536|gb|EEE93083.1| predicted protein [Populus trichocarpa] Length = 479 Score = 79.7 bits (195), Expect = 2e-13 Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 4/88 (4%) Frame = -1 Query: 318 MAERGAIWSGIRSVVNIXXXXXXXXXLVSAERTSLKHFEDSKQVVEKKD----YFLNVVN 151 MAE G W G+RSV+ + VSAER LKH S ++ E D Y L VN Sbjct: 1 MAEFGGKWRGLRSVLMVLLNFLLAFVFVSAER-GLKHEATSTRMNETGDSVSSYVLKAVN 59 Query: 150 FLWRSDQTGYQHVWPELTFSWKIVVGSI 67 FLW+ D GYQHVWPE+ F W+IV+GSI Sbjct: 60 FLWQPDHKGYQHVWPEMKFGWQIVLGSI 87 >ref|XP_002516571.1| conserved hypothetical protein [Ricinus communis] gi|223544391|gb|EEF45912.1| conserved hypothetical protein [Ricinus communis] Length = 476 Score = 74.3 bits (181), Expect = 9e-12 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Frame = -1 Query: 306 GAIWSGIRSVVNIXXXXXXXXXLVSAERTSLKHFEDSKQVVEK--KDYFLNVVNFLWRSD 133 G W G+RSV+ + LVSAER + F + Q + YF+ V+FLW+ D Sbjct: 6 GGKWRGLRSVLMVSLNFLLAFVLVSAERGMRREFTGTPQTEGEGLSTYFVKAVDFLWQPD 65 Query: 132 QTGYQHVWPELTFSWKIVVGSI 67 QTGY+HVWPE+ F W+IV+G+I Sbjct: 66 QTGYRHVWPEMRFGWQIVLGTI 87 >ref|XP_002878880.1| hypothetical protein ARALYDRAFT_481426 [Arabidopsis lyrata subsp. lyrata] gi|297324719|gb|EFH55139.1| hypothetical protein ARALYDRAFT_481426 [Arabidopsis lyrata subsp. lyrata] Length = 479 Score = 73.2 bits (178), Expect = 2e-11 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 4/88 (4%) Frame = -1 Query: 318 MAERGAIWSGIRSVVNIXXXXXXXXXLVSAERTSLK----HFEDSKQVVEKKDYFLNVVN 151 MA+ + W G+RSV+ + VSAER +K + + +FL VN Sbjct: 1 MAKLRSKWLGLRSVIMVLINFSLAFAFVSAERRIIKGKSLRLNSDETRENESSFFLKAVN 60 Query: 150 FLWRSDQTGYQHVWPELTFSWKIVVGSI 67 FLW SDQ GY+HVWPE F+W+IV+G++ Sbjct: 61 FLWESDQIGYRHVWPEFEFNWQIVLGTL 88 >emb|CAN61520.1| hypothetical protein VITISV_033969 [Vitis vinifera] Length = 382 Score = 68.9 bits (167), Expect = 4e-10 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 4/61 (6%) Frame = -1 Query: 237 VSAERTSLKH----FEDSKQVVEKKDYFLNVVNFLWRSDQTGYQHVWPELTFSWKIVVGS 70 VS ER S+KH F +K+ +Y VVNFLW+SD++GYQHVWPE+ F W+IVVGS Sbjct: 87 VSGER-SIKHEASTFNVTKEAGFNSNYLSKVVNFLWQSDRSGYQHVWPEMEFGWQIVVGS 145 Query: 69 I 67 I Sbjct: 146 I 146 >ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera] gi|296081886|emb|CBI20891.3| unnamed protein product [Vitis vinifera] Length = 478 Score = 68.6 bits (166), Expect = 5e-10 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 4/61 (6%) Frame = -1 Query: 237 VSAERTSLKH----FEDSKQVVEKKDYFLNVVNFLWRSDQTGYQHVWPELTFSWKIVVGS 70 VS ER S+KH F +K+ +Y VVNFLW+SD++GYQHVWPE+ F W+IVVGS Sbjct: 24 VSGER-SIKHEASTFNVTKEAGFNSNYLSKVVNFLWQSDRSGYQHVWPEMEFGWQIVVGS 82 Query: 69 I 67 + Sbjct: 83 V 83