BLASTX nr result

ID: Coptis24_contig00018789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018789
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002516571.1| conserved hypothetical protein [Ricinus comm...    74   9e-12
ref|XP_002878880.1| hypothetical protein ARALYDRAFT_481426 [Arab...    73   2e-11
emb|CAN61520.1| hypothetical protein VITISV_033969 [Vitis vinifera]    69   4e-10
ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267...    69   5e-10

>ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|222855536|gb|EEE93083.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
 Frame = -1

Query: 318 MAERGAIWSGIRSVVNIXXXXXXXXXLVSAERTSLKHFEDSKQVVEKKD----YFLNVVN 151
           MAE G  W G+RSV+ +          VSAER  LKH   S ++ E  D    Y L  VN
Sbjct: 1   MAEFGGKWRGLRSVLMVLLNFLLAFVFVSAER-GLKHEATSTRMNETGDSVSSYVLKAVN 59

Query: 150 FLWRSDQTGYQHVWPELTFSWKIVVGSI 67
           FLW+ D  GYQHVWPE+ F W+IV+GSI
Sbjct: 60  FLWQPDHKGYQHVWPEMKFGWQIVLGSI 87


>ref|XP_002516571.1| conserved hypothetical protein [Ricinus communis]
           gi|223544391|gb|EEF45912.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 476

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
 Frame = -1

Query: 306 GAIWSGIRSVVNIXXXXXXXXXLVSAERTSLKHFEDSKQVVEK--KDYFLNVVNFLWRSD 133
           G  W G+RSV+ +         LVSAER   + F  + Q   +    YF+  V+FLW+ D
Sbjct: 6   GGKWRGLRSVLMVSLNFLLAFVLVSAERGMRREFTGTPQTEGEGLSTYFVKAVDFLWQPD 65

Query: 132 QTGYQHVWPELTFSWKIVVGSI 67
           QTGY+HVWPE+ F W+IV+G+I
Sbjct: 66  QTGYRHVWPEMRFGWQIVLGTI 87


>ref|XP_002878880.1| hypothetical protein ARALYDRAFT_481426 [Arabidopsis lyrata subsp.
           lyrata] gi|297324719|gb|EFH55139.1| hypothetical protein
           ARALYDRAFT_481426 [Arabidopsis lyrata subsp. lyrata]
          Length = 479

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = -1

Query: 318 MAERGAIWSGIRSVVNIXXXXXXXXXLVSAERTSLK----HFEDSKQVVEKKDYFLNVVN 151
           MA+  + W G+RSV+ +          VSAER  +K         +    +  +FL  VN
Sbjct: 1   MAKLRSKWLGLRSVIMVLINFSLAFAFVSAERRIIKGKSLRLNSDETRENESSFFLKAVN 60

Query: 150 FLWRSDQTGYQHVWPELTFSWKIVVGSI 67
           FLW SDQ GY+HVWPE  F+W+IV+G++
Sbjct: 61  FLWESDQIGYRHVWPEFEFNWQIVLGTL 88


>emb|CAN61520.1| hypothetical protein VITISV_033969 [Vitis vinifera]
          Length = 382

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
 Frame = -1

Query: 237 VSAERTSLKH----FEDSKQVVEKKDYFLNVVNFLWRSDQTGYQHVWPELTFSWKIVVGS 70
           VS ER S+KH    F  +K+     +Y   VVNFLW+SD++GYQHVWPE+ F W+IVVGS
Sbjct: 87  VSGER-SIKHEASTFNVTKEAGFNSNYLSKVVNFLWQSDRSGYQHVWPEMEFGWQIVVGS 145

Query: 69  I 67
           I
Sbjct: 146 I 146


>ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera]
           gi|296081886|emb|CBI20891.3| unnamed protein product
           [Vitis vinifera]
          Length = 478

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
 Frame = -1

Query: 237 VSAERTSLKH----FEDSKQVVEKKDYFLNVVNFLWRSDQTGYQHVWPELTFSWKIVVGS 70
           VS ER S+KH    F  +K+     +Y   VVNFLW+SD++GYQHVWPE+ F W+IVVGS
Sbjct: 24  VSGER-SIKHEASTFNVTKEAGFNSNYLSKVVNFLWQSDRSGYQHVWPEMEFGWQIVVGS 82

Query: 69  I 67
           +
Sbjct: 83  V 83


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