BLASTX nr result

ID: Coptis24_contig00018786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018786
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37604.3| unnamed protein product [Vitis vinifera]              177   2e-42
ref|XP_002276832.1| PREDICTED: probable plastid-lipid-associated...   177   2e-42
emb|CAN60269.1| hypothetical protein VITISV_029394 [Vitis vinifera]   177   2e-42
ref|XP_002300202.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|XP_002522199.1| structural molecule, putative [Ricinus commu...   154   1e-35

>emb|CBI37604.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  177 bits (449), Expect = 2e-42
 Identities = 96/161 (59%), Positives = 112/161 (69%), Gaps = 11/161 (6%)
 Frame = +2

Query: 2   RTPRVVSVTLLRIKRVAGFGEYPSGFGPTYAIKADESSSGLTDNVQ-----------EQG 148
           R  R VS T    +R + FGE+PSG  P YAI+  E S GL  + Q           EQ 
Sbjct: 2   RAHRPVSATHSGSRRRSIFGEFPSGSRPFYAIRVAEQSPGLVGDDQDIVVKEEEEEDEQE 61

Query: 149 TVFDDYKKVPQIKAGLYQAIQGINRGIFGVPSAKKSEIEDLVKLLESQNPTPHPTENLDK 328
               D + +  +KA LYQA+QGINRG+FGVPSAKKSEIE LVKLLESQNPTP PT NLDK
Sbjct: 62  GASSDDRTIANVKADLYQAVQGINRGVFGVPSAKKSEIEALVKLLESQNPTPEPTLNLDK 121

Query: 329 VGGCWKLIYNTITILGSKRTKLGLRDFITLGNFFQTIDINK 451
           V G WKL+Y+TITILGSKRTKLGLR+FITLG+F Q ID+ +
Sbjct: 122 VNGWWKLVYSTITILGSKRTKLGLRNFITLGDFLQIIDVEE 162


>ref|XP_002276832.1| PREDICTED: probable plastid-lipid-associated protein 7,
           chloroplastic [Vitis vinifera]
          Length = 285

 Score =  177 bits (449), Expect = 2e-42
 Identities = 96/161 (59%), Positives = 112/161 (69%), Gaps = 11/161 (6%)
 Frame = +2

Query: 2   RTPRVVSVTLLRIKRVAGFGEYPSGFGPTYAIKADESSSGLTDNVQ-----------EQG 148
           R  R VS T    +R + FGE+PSG  P YAI+  E S GL  + Q           EQ 
Sbjct: 27  RAHRPVSATHSGSRRRSIFGEFPSGSRPFYAIRVAEQSPGLVGDDQDIVVKEEEEEDEQE 86

Query: 149 TVFDDYKKVPQIKAGLYQAIQGINRGIFGVPSAKKSEIEDLVKLLESQNPTPHPTENLDK 328
               D + +  +KA LYQA+QGINRG+FGVPSAKKSEIE LVKLLESQNPTP PT NLDK
Sbjct: 87  GASSDDRTIANVKADLYQAVQGINRGVFGVPSAKKSEIEALVKLLESQNPTPEPTLNLDK 146

Query: 329 VGGCWKLIYNTITILGSKRTKLGLRDFITLGNFFQTIDINK 451
           V G WKL+Y+TITILGSKRTKLGLR+FITLG+F Q ID+ +
Sbjct: 147 VNGWWKLVYSTITILGSKRTKLGLRNFITLGDFLQIIDVEE 187


>emb|CAN60269.1| hypothetical protein VITISV_029394 [Vitis vinifera]
          Length = 233

 Score =  177 bits (449), Expect = 2e-42
 Identities = 96/158 (60%), Positives = 113/158 (71%), Gaps = 8/158 (5%)
 Frame = +2

Query: 2   RTPRVVSVTLLRIKRVAGFGEYPSGFGPTYAIKADESSSGLTDNVQ--------EQGTVF 157
           R  R VS T    +R +  GE+PSG  P YAI+  E S GL  + Q        E+G   
Sbjct: 27  RAHRPVSATHSGSRRRSVLGEFPSGSRPFYAIRVAEQSPGLVGDDQDIVVKEEEEEGASS 86

Query: 158 DDYKKVPQIKAGLYQAIQGINRGIFGVPSAKKSEIEDLVKLLESQNPTPHPTENLDKVGG 337
           DD + +  +KA LYQA+QGINRG+FGVPSAKKSEIE LVKLLESQNPTP PT NLDKV G
Sbjct: 87  DD-RTIANVKADLYQAVQGINRGVFGVPSAKKSEIEALVKLLESQNPTPEPTLNLDKVNG 145

Query: 338 CWKLIYNTITILGSKRTKLGLRDFITLGNFFQTIDINK 451
            WKL+Y+TITILGSKRTKLGLR+FITLG+F Q ID+ +
Sbjct: 146 WWKLVYSTITILGSKRTKLGLRNFITLGDFLQIIDVEE 183


>ref|XP_002300202.1| predicted protein [Populus trichocarpa] gi|222847460|gb|EEE85007.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  164 bits (414), Expect = 2e-38
 Identities = 85/123 (69%), Positives = 97/123 (78%)
 Frame = +2

Query: 83  PTYAIKADESSSGLTDNVQEQGTVFDDYKKVPQIKAGLYQAIQGINRGIFGVPSAKKSEI 262
           P + IK  E S GL D+ +E      D ++V QIKA LYQA+Q INRGIFGVPSAKKS I
Sbjct: 3   PIHTIKVAEQSPGLVDDNKEINENDKDNREVEQIKADLYQAVQVINRGIFGVPSAKKSAI 62

Query: 263 EDLVKLLESQNPTPHPTENLDKVGGCWKLIYNTITILGSKRTKLGLRDFITLGNFFQTID 442
             LV+LLESQNPTP PT NL+KVGG WKL+Y+TITILGSKRTKLGLRDFITLG+FFQ ID
Sbjct: 63  LGLVELLESQNPTPDPTLNLEKVGGRWKLVYSTITILGSKRTKLGLRDFITLGDFFQNID 122

Query: 443 INK 451
           + K
Sbjct: 123 VAK 125


>ref|XP_002522199.1| structural molecule, putative [Ricinus communis]
           gi|223538570|gb|EEF40174.1| structural molecule,
           putative [Ricinus communis]
          Length = 266

 Score =  154 bits (390), Expect = 1e-35
 Identities = 87/139 (62%), Positives = 100/139 (71%), Gaps = 3/139 (2%)
 Frame = +2

Query: 44  RVAGFGEYPSGFGPTYAIKADESSSGLT-DN--VQEQGTVFDDYKKVPQIKAGLYQAIQG 214
           R A FGE   GF P +  K  E +SGL  DN  ++E G    + + V QIK  LY A+QG
Sbjct: 38  RDAKFGE---GFVPIHITKVAEQTSGLVGDNKDIEENGK---NNRTVSQIKEDLYHALQG 91

Query: 215 INRGIFGVPSAKKSEIEDLVKLLESQNPTPHPTENLDKVGGCWKLIYNTITILGSKRTKL 394
            NRGIFGV S KKSEI  LV+LLESQNPT  PT NLDKV GCWKL+Y+TITILGSKRTKL
Sbjct: 92  TNRGIFGVKSEKKSEIHGLVELLESQNPTADPTVNLDKVDGCWKLLYSTITILGSKRTKL 151

Query: 395 GLRDFITLGNFFQTIDINK 451
           GLRDFI+LG+ FQ ID+ K
Sbjct: 152 GLRDFISLGDLFQNIDVTK 170


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