BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018782
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    43   6e-08
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    49   4e-07
ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g1471...    44   3e-06

>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 42.7 bits (99), Expect(2) = 6e-08
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
 Frame = -1

Query: 722 MNAPSLVSLSWVSDYLPIECNLSDMPSLASANVIFQKFRPERPIEEMGLVSSNILEALSH 543
           ++A +L+SLS+ S+   I C L +  S+  AN+    F  +     + + +  +   L  
Sbjct: 242 IDAVNLLSLSYKSNPT-INCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGS 300

Query: 542 VKALQISGQILW---HAKDFSNQLPKFENLLQLEVHKDFHHC 426
           V++L++S Q +    +AK   + LP F+NL +LEVH D   C
Sbjct: 301 VESLRLSDQTIQCLNYAKSALHLLPSFKNLTRLEVHFDDPSC 342



 Score = 40.0 bits (92), Expect(2) = 6e-08
 Identities = 19/65 (29%), Positives = 38/65 (58%)
 Frame = -3

Query: 342 DEDGWNIETVPQCSLLNLKKVEYREFDGYSMELDVIKYLLENASDLEEIYLHSSDELRQH 163
           D + W  +++P C   +LK  +  +F G   E+ ++K+LLEN + L E+ ++ +  L + 
Sbjct: 380 DSEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTLLREMNIYCTGYLSK- 438

Query: 162 KGRKM 148
           K +K+
Sbjct: 439 KSKKL 443


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 49.3 bits (116), Expect(2) = 4e-07
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
 Frame = -3

Query: 393 SPYLATLVFKGEKPYTKD--EDGWNIET-VPQCSLLNLKKVEYREFDGYSMELDVIKYLL 223
           SP L  LV   E  YT +   +GW +   VP C +L+LK++E R   G   EL+ ++YLL
Sbjct: 357 SPNLEALVI--ETGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLL 414

Query: 222 ENASDLEEIYLHSSDELRQHKGRKMRAMEKLLMIPRNS 109
           +NA  L+++ +   D    +  ++    +KLL +PR S
Sbjct: 415 KNAEVLQQMTI---DCHESYMDQEFCVCKKLLGLPRGS 449



 Score = 30.8 bits (68), Expect(2) = 4e-07
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
 Frame = -1

Query: 722 MNAPSLVSLSWVSDYLPIECNLSDMPSLASANVIFQKFRPE-RPIEEMGLVSSN-----I 561
           ++AP+L  LS ++DYL  +  + D+PSL  A +  ++   E       G +S +     +
Sbjct: 241 VDAPNLEYLS-ITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYEL 299

Query: 560 LEALSHVKALQISGQILWHAKDF--SNQLPKFENLLQLE 450
           L  +S+VK L ++G  L          +LP F N+ +LE
Sbjct: 300 LGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLE 338


>ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g14710-like [Glycine max]
          Length = 453

 Score = 43.9 bits (102), Expect(2) = 3e-06
 Identities = 27/100 (27%), Positives = 55/100 (55%)
 Frame = -3

Query: 390 PYLATLVFKGEKPYTKDEDGWNIETVPQCSLLNLKKVEYREFDGYSMELDVIKYLLENAS 211
           P L++LV +     +  +      +VPQC L +LK  +++EF+    EL + K++L NA+
Sbjct: 353 PILSSLVLQNGVSESNKDHVLTSASVPQCFLSSLKVFQFKEFNVREHELLLAKFVLANAA 412

Query: 210 DLEEIYLHSSDELRQHKGRKMRAMEKLLMIPRNSTRSVIR 91
            LE++ + ++  LR  +    +  +++L  P+ S   +I+
Sbjct: 413 VLEQMIICTAFWLRYSEIDVEKVKDQILSFPKCSNLVMIQ 452



 Score = 33.1 bits (74), Expect(2) = 3e-06
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
 Frame = -1

Query: 716 APSLVSLSWVSDYLPIECNLSDMPSLASANVIFQKFRPERP-IEEMGLVSSNILEALSHV 540
           AP+L   S+  D L  E  L +  S+ SA+V+      +   + ++G     +L  +  V
Sbjct: 247 APNLADFSYGGD-LEQEIILLNSASIHSASVVIVADEDKMTNVGKLGFQVHKLLAQIREV 305

Query: 539 KALQISG-QILWHAKDFSNQLPKFENLLQLEVHK 441
           K L++   ++L HA+D    LP F  L  L++++
Sbjct: 306 KQLKLLFYKVLMHARDIFTHLPAFSRLSYLQLNE 339