BLASTX nr result
ID: Coptis24_contig00018782
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018782 (722 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul... 43 6e-08 emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 49 4e-07 ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g1471... 44 3e-06 >ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 467 Score = 42.7 bits (99), Expect(2) = 6e-08 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 3/102 (2%) Frame = -1 Query: 722 MNAPSLVSLSWVSDYLPIECNLSDMPSLASANVIFQKFRPERPIEEMGLVSSNILEALSH 543 ++A +L+SLS+ S+ I C L + S+ AN+ F + + + + + L Sbjct: 242 IDAVNLLSLSYKSNPT-INCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGS 300 Query: 542 VKALQISGQILW---HAKDFSNQLPKFENLLQLEVHKDFHHC 426 V++L++S Q + +AK + LP F+NL +LEVH D C Sbjct: 301 VESLRLSDQTIQCLNYAKSALHLLPSFKNLTRLEVHFDDPSC 342 Score = 40.0 bits (92), Expect(2) = 6e-08 Identities = 19/65 (29%), Positives = 38/65 (58%) Frame = -3 Query: 342 DEDGWNIETVPQCSLLNLKKVEYREFDGYSMELDVIKYLLENASDLEEIYLHSSDELRQH 163 D + W +++P C +LK + +F G E+ ++K+LLEN + L E+ ++ + L + Sbjct: 380 DSEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTLLREMNIYCTGYLSK- 438 Query: 162 KGRKM 148 K +K+ Sbjct: 439 KSKKL 443 >emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] Length = 607 Score = 49.3 bits (116), Expect(2) = 4e-07 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 3/98 (3%) Frame = -3 Query: 393 SPYLATLVFKGEKPYTKD--EDGWNIET-VPQCSLLNLKKVEYREFDGYSMELDVIKYLL 223 SP L LV E YT + +GW + VP C +L+LK++E R G EL+ ++YLL Sbjct: 357 SPNLEALVI--ETGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLL 414 Query: 222 ENASDLEEIYLHSSDELRQHKGRKMRAMEKLLMIPRNS 109 +NA L+++ + D + ++ +KLL +PR S Sbjct: 415 KNAEVLQQMTI---DCHESYMDQEFCVCKKLLGLPRGS 449 Score = 30.8 bits (68), Expect(2) = 4e-07 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Frame = -1 Query: 722 MNAPSLVSLSWVSDYLPIECNLSDMPSLASANVIFQKFRPE-RPIEEMGLVSSN-----I 561 ++AP+L LS ++DYL + + D+PSL A + ++ E G +S + + Sbjct: 241 VDAPNLEYLS-ITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYEL 299 Query: 560 LEALSHVKALQISGQILWHAKDF--SNQLPKFENLLQLE 450 L +S+VK L ++G L +LP F N+ +LE Sbjct: 300 LGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLE 338 >ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g14710-like [Glycine max] Length = 453 Score = 43.9 bits (102), Expect(2) = 3e-06 Identities = 27/100 (27%), Positives = 55/100 (55%) Frame = -3 Query: 390 PYLATLVFKGEKPYTKDEDGWNIETVPQCSLLNLKKVEYREFDGYSMELDVIKYLLENAS 211 P L++LV + + + +VPQC L +LK +++EF+ EL + K++L NA+ Sbjct: 353 PILSSLVLQNGVSESNKDHVLTSASVPQCFLSSLKVFQFKEFNVREHELLLAKFVLANAA 412 Query: 210 DLEEIYLHSSDELRQHKGRKMRAMEKLLMIPRNSTRSVIR 91 LE++ + ++ LR + + +++L P+ S +I+ Sbjct: 413 VLEQMIICTAFWLRYSEIDVEKVKDQILSFPKCSNLVMIQ 452 Score = 33.1 bits (74), Expect(2) = 3e-06 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%) Frame = -1 Query: 716 APSLVSLSWVSDYLPIECNLSDMPSLASANVIFQKFRPERP-IEEMGLVSSNILEALSHV 540 AP+L S+ D L E L + S+ SA+V+ + + ++G +L + V Sbjct: 247 APNLADFSYGGD-LEQEIILLNSASIHSASVVIVADEDKMTNVGKLGFQVHKLLAQIREV 305 Query: 539 KALQISG-QILWHAKDFSNQLPKFENLLQLEVHK 441 K L++ ++L HA+D LP F L L++++ Sbjct: 306 KQLKLLFYKVLMHARDIFTHLPAFSRLSYLQLNE 339