BLASTX nr result

ID: Coptis24_contig00018781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018781
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271057.2| PREDICTED: uncharacterized protein yqxC-like...   439   e-120
ref|XP_002527285.1| Hemolysin A, putative [Ricinus communis] gi|...   435   e-119
ref|XP_004149317.1| PREDICTED: putative rRNA methyltransferase Y...   414   e-113
ref|XP_003529002.1| PREDICTED: uncharacterized protein yqxC-like...   411   e-112
ref|XP_002321231.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110

>ref|XP_002271057.2| PREDICTED: uncharacterized protein yqxC-like [Vitis vinifera]
            gi|302144209|emb|CBI23336.3| unnamed protein product
            [Vitis vinifera]
          Length = 300

 Score =  439 bits (1128), Expect = e-120
 Identities = 234/310 (75%), Positives = 257/310 (82%), Gaps = 2/310 (0%)
 Frame = -2

Query: 1305 MALLLLKLP-FSRTCPS-LVLLSKSKALIXXXXXXXXTWSSNIHIHSQFRIYATSKYGNI 1132
            MAL + KLP  SR C S L   SKS + +              H+ S FR +AT+K G I
Sbjct: 1    MALQIPKLPTISRCCSSTLFFFSKSTSPVNASWV-------RTHLRSSFRSFATTKPGKI 53

Query: 1131 QQPQXXXXXXRLDEICLERFQQYSRTYIQSWILQGKVLVDGKVVNKAGTPISDKAVVEIK 952
            Q  +       LDE+CLERFQQYSRT+IQSWILQGKV VDGKVVNKAGTP+SDKAVVEI 
Sbjct: 54   QPLKKKRR---LDEVCLERFQQYSRTFIQSWILQGKVFVDGKVVNKAGTPVSDKAVVEIM 110

Query: 951  AEVPKYVCRAGYKLEAALEQLNIDVSGKLAMDAGLSTGGFTDCLLQHGASFVYGVDVGYG 772
            AEVPKYVCRAGYKLEAA+EQL ++VSGK+A+D+GLSTGGFTDCLLQ+GASF+YGVDVGYG
Sbjct: 111  AEVPKYVCRAGYKLEAAIEQLGVEVSGKVALDSGLSTGGFTDCLLQYGASFIYGVDVGYG 170

Query: 771  QVADKIRQDERVSVIERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMKSEAILV 592
            QVADKIR+DERVSV+ERTNLRYL GLPQKVDLVTLDLSFISILLVMPAVVNVMK E+ LV
Sbjct: 171  QVADKIRRDERVSVVERTNLRYLPGLPQKVDLVTLDLSFISILLVMPAVVNVMKEESTLV 230

Query: 591  TLVKPQFEARRAQVGGGGIVRDPLVHQEVLERIIKGVENFGFCTIGWIESPLKGAEGNTE 412
            TLVKPQFEARR+QVGGGGIVRDPLVHQEVLERIIKGVE+FGF   GWIESPLKGAEGNTE
Sbjct: 231  TLVKPQFEARRSQVGGGGIVRDPLVHQEVLERIIKGVESFGFECKGWIESPLKGAEGNTE 290

Query: 411  FLVYFERTME 382
            FLV F R  E
Sbjct: 291  FLVCFTRKPE 300


>ref|XP_002527285.1| Hemolysin A, putative [Ricinus communis] gi|223533378|gb|EEF35129.1|
            Hemolysin A, putative [Ricinus communis]
          Length = 312

 Score =  435 bits (1119), Expect = e-119
 Identities = 230/311 (73%), Positives = 255/311 (81%), Gaps = 3/311 (0%)
 Frame = -2

Query: 1305 MALLLLKLPF-SRTCPSLVLLSKSKALIXXXXXXXXTWSSNIHIHSQF--RIYATSKYGN 1135
            MA+  LKLP  SR C +    S S  +              +    QF  R +A +K G 
Sbjct: 1    MAMRFLKLPLISRYCNNYNSSSSSSFVSLSKFYPTRLTVKWVKPEMQFSFRSFAVAKTGK 60

Query: 1134 IQQPQXXXXXXRLDEICLERFQQYSRTYIQSWILQGKVLVDGKVVNKAGTPISDKAVVEI 955
            IQ P+       LDEICLERFQQYSRT+IQSWILQGKV VDGK+VNKAGTP+SDKAVVEI
Sbjct: 61   IQIPKKKRR---LDEICLERFQQYSRTFIQSWILQGKVFVDGKMVNKAGTPVSDKAVVEI 117

Query: 954  KAEVPKYVCRAGYKLEAALEQLNIDVSGKLAMDAGLSTGGFTDCLLQHGASFVYGVDVGY 775
             AEVPKYVCRAG+KLEAA+EQL +DV+GK+A+D+GLSTGGFTDCLLQ+GASFVYGVDVGY
Sbjct: 118  MAEVPKYVCRAGHKLEAAIEQLGVDVAGKVALDSGLSTGGFTDCLLQYGASFVYGVDVGY 177

Query: 774  GQVADKIRQDERVSVIERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMKSEAIL 595
            GQVADKIR+DERVSV+ERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMK +A L
Sbjct: 178  GQVADKIRRDERVSVVERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMKEDAAL 237

Query: 594  VTLVKPQFEARRAQVGGGGIVRDPLVHQEVLERIIKGVENFGFCTIGWIESPLKGAEGNT 415
            +TLVKPQFEARR+QVG GGIVRDP VH+EVLE+IIKGVENFGFC  GWIESPLKGAEGNT
Sbjct: 238  ITLVKPQFEARRSQVGSGGIVRDPEVHKEVLEKIIKGVENFGFCKNGWIESPLKGAEGNT 297

Query: 414  EFLVYFERTME 382
            EFLVYF RT E
Sbjct: 298  EFLVYFSRTPE 308


>ref|XP_004149317.1| PREDICTED: putative rRNA methyltransferase YqxC-like [Cucumis
            sativus] gi|449518775|ref|XP_004166411.1| PREDICTED:
            putative rRNA methyltransferase YqxC-like [Cucumis
            sativus]
          Length = 296

 Score =  414 bits (1063), Expect = e-113
 Identities = 210/269 (78%), Positives = 238/269 (88%)
 Frame = -2

Query: 1194 SSNIHIHSQFRIYATSKYGNIQQPQXXXXXXRLDEICLERFQQYSRTYIQSWILQGKVLV 1015
            SS IH  S  + ++ +K G IQ         RLDE+C+ER+QQ+SRT IQSWILQGKVLV
Sbjct: 22   SSPIHSPSP-KAFSVAKSGKIQS-LTLKKKRRLDEVCVERYQQFSRTMIQSWILQGKVLV 79

Query: 1014 DGKVVNKAGTPISDKAVVEIKAEVPKYVCRAGYKLEAALEQLNIDVSGKLAMDAGLSTGG 835
            DGKV++KAGTP++DKA VEI AEVPKYVCRAG KLEAA+EQL++DV GK+A+DAGLSTGG
Sbjct: 80   DGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQLDVDVDGKVALDAGLSTGG 139

Query: 834  FTDCLLQHGASFVYGVDVGYGQVADKIRQDERVSVIERTNLRYLSGLPQKVDLVTLDLSF 655
            FTDCLLQHGASFVYGVDVGYGQVADKIR+DERV V+ERTNLRYL+GLPQKVD+VTLDLSF
Sbjct: 140  FTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSF 199

Query: 654  ISILLVMPAVVNVMKSEAILVTLVKPQFEARRAQVGGGGIVRDPLVHQEVLERIIKGVEN 475
            ISILLVMPAV+NVMK  + +VTLVKPQFE RR+QVGGGGIVRDP VHQEVLE+IIKGVEN
Sbjct: 200  ISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIVRDPQVHQEVLEKIIKGVEN 259

Query: 474  FGFCTIGWIESPLKGAEGNTEFLVYFERT 388
            FGFC+ GWIESPLKGAEGNTEFLV F+RT
Sbjct: 260  FGFCSKGWIESPLKGAEGNTEFLVCFDRT 288


>ref|XP_003529002.1| PREDICTED: uncharacterized protein yqxC-like [Glycine max]
          Length = 315

 Score =  411 bits (1057), Expect = e-112
 Identities = 218/312 (69%), Positives = 246/312 (78%), Gaps = 2/312 (0%)
 Frame = -2

Query: 1305 MALLLLKLP--FSRTCPSLVLLSKSKALIXXXXXXXXTWSSNIHIHSQFRIYATSKYGNI 1132
            MAL  LK P   SR   +   L+    L             N  I + FR YAT+K   +
Sbjct: 1    MALQFLKHPVTISRGLHNETTLTFISRLRNPKLLFSVRCEDNAQIATSFRSYATAKSEKV 60

Query: 1131 QQPQXXXXXXRLDEICLERFQQYSRTYIQSWILQGKVLVDGKVVNKAGTPISDKAVVEIK 952
             Q +       LDEIC+E++QQYSR+ IQSWILQGKV VDGKV+NKAGTP+  KAVVEIK
Sbjct: 61   LQVRKKKR---LDEICVEKYQQYSRSVIQSWILQGKVYVDGKVINKAGTPVPGKAVVEIK 117

Query: 951  AEVPKYVCRAGYKLEAALEQLNIDVSGKLAMDAGLSTGGFTDCLLQHGASFVYGVDVGYG 772
            A+VPKYVCRAG+KLEAA+E L +DV+GK+A+D+GLSTGGFTDCLLQ+GAS VYGVDVGYG
Sbjct: 118  ADVPKYVCRAGHKLEAAVELLGVDVAGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYG 177

Query: 771  QVADKIRQDERVSVIERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMKSEAILV 592
            QVADKIR+DERVSVIERTNLRYL+ LPQ VDLVTLDLSFISILLVMPAVVN MK  A LV
Sbjct: 178  QVADKIRRDERVSVIERTNLRYLAELPQNVDLVTLDLSFISILLVMPAVVNAMKENAALV 237

Query: 591  TLVKPQFEARRAQVGGGGIVRDPLVHQEVLERIIKGVENFGFCTIGWIESPLKGAEGNTE 412
            TLVKPQFEARR+QVG GGIV+DP VHQEVLE+IIKGVENFGFC  GWIESPLKGAEGNTE
Sbjct: 238  TLVKPQFEARRSQVGKGGIVKDPAVHQEVLEKIIKGVENFGFCCKGWIESPLKGAEGNTE 297

Query: 411  FLVYFERTMEVE 376
            FLV+F RT  +E
Sbjct: 298  FLVHFNRTHNIE 309


>ref|XP_002321231.1| predicted protein [Populus trichocarpa] gi|222862004|gb|EEE99546.1|
            predicted protein [Populus trichocarpa]
          Length = 255

 Score =  402 bits (1034), Expect = e-110
 Identities = 203/243 (83%), Positives = 222/243 (91%)
 Frame = -2

Query: 1098 LDEICLERFQQYSRTYIQSWILQGKVLVDGKVVNKAGTPISDKAVVEIKAEVPKYVCRAG 919
            LDEICLERFQQYSRT+IQSWILQGKV VDGKV NKAGTP+S+K+VVEI A VPKYVCRAG
Sbjct: 13   LDEICLERFQQYSRTFIQSWILQGKVFVDGKVANKAGTPVSEKSVVEIIAVVPKYVCRAG 72

Query: 918  YKLEAALEQLNIDVSGKLAMDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRQDER 739
            YKLEAA+E+L++DV+GK+A+D+GLSTGGFTDCLLQ+GASFVYGVDVGYGQVADKIR+DER
Sbjct: 73   YKLEAAIEKLDVDVAGKVALDSGLSTGGFTDCLLQYGASFVYGVDVGYGQVADKIRRDER 132

Query: 738  VSVIERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMKSEAILVTLVKPQFEARR 559
            V VIERTNLRYLS LPQKVDLVTLDLSFISILLVMPAVVNVMK EA LVTLVKPQFEARR
Sbjct: 133  VCVIERTNLRYLSELPQKVDLVTLDLSFISILLVMPAVVNVMKEEATLVTLVKPQFEARR 192

Query: 558  AQVGGGGIVRDPLVHQEVLERIIKGVENFGFCTIGWIESPLKGAEGNTEFLVYFERTMEV 379
            +QVG GGIVRD  VHQEVLE+I KGVE FGF + GWIESPLKGAEGN EFLV+F R  E 
Sbjct: 193  SQVGSGGIVRDSQVHQEVLEKITKGVEGFGFRSNGWIESPLKGAEGNIEFLVHFSRIHEN 252

Query: 378  ESE 370
             +E
Sbjct: 253  SAE 255


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