BLASTX nr result

ID: Coptis24_contig00018776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018776
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis v...   276   3e-72
ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [S...   272   5e-71
sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; A...   269   5e-70
ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [...   264   1e-68
ref|XP_002298447.1| predicted protein [Populus trichocarpa] gi|2...   263   3e-68

>ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
           gi|297736218|emb|CBI24856.3| unnamed protein product
           [Vitis vinifera]
          Length = 226

 Score =  276 bits (706), Expect = 3e-72
 Identities = 139/159 (87%), Positives = 152/159 (95%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2   QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLI 181
           QIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDHVARWL+ELRGHADKNIVIML+
Sbjct: 68  QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVIMLV 127

Query: 182 GNKSDLGTLRSVSTEDAKEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLV 361
           GNKSDLGTL++V TEDAKEFA+RENLFFMETSALEATNVETAFL+VLTEIYRIISKK+LV
Sbjct: 128 GNKSDLGTLQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKKTLV 187

Query: 362 AN-ETESGGNSSLLKGTKIVVPGQEPEAAKSKPMCCVSS 475
           AN E ESGGNSSLLKGTKI+VPG+EP++  SK  CC+SS
Sbjct: 188 ANEEVESGGNSSLLKGTKIIVPGKEPKSEGSKYNCCLSS 226


>ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
           gi|241923335|gb|EER96479.1| hypothetical protein
           SORBIDRAFT_02g018890 [Sorghum bicolor]
          Length = 226

 Score =  272 bits (696), Expect = 5e-71
 Identities = 139/159 (87%), Positives = 149/159 (93%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2   QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLI 181
           QIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDHVARWLEELRGHADKNIVIMLI
Sbjct: 69  QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLI 128

Query: 182 GNKSDLGTLRSVSTEDAKEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLV 361
           GNKSDLGTLRSV+TEDAKEFA+RENLFFMETSALEA NVE AF+TVLTEIYR++SKK+LV
Sbjct: 129 GNKSDLGTLRSVATEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYRVVSKKNLV 188

Query: 362 AN-ETESGGNSSLLKGTKIVVPGQEPEAAKSKPMCCVSS 475
           AN E++S GNSSLLKGTKIVVPGQEP    SK  CC+SS
Sbjct: 189 ANEESDSSGNSSLLKGTKIVVPGQEPPPT-SKATCCMSS 226


>sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
           regulatory protein RGP1 gi|50251643|dbj|BAD29646.1|
           putative ras-related GTP-binding protein [Oryza sativa
           Japonica Group] gi|222641214|gb|EEE69346.1| hypothetical
           protein OsJ_28668 [Oryza sativa Japonica Group]
          Length = 226

 Score =  269 bits (687), Expect = 5e-70
 Identities = 138/158 (87%), Positives = 147/158 (93%), Gaps = 1/158 (0%)
 Frame = +2

Query: 2   QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLI 181
           QIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDHVARWLEELRGHADKNIVIMLI
Sbjct: 70  QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLI 129

Query: 182 GNKSDLGTLRSVSTEDAKEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLV 361
           GNKSDLGTLR V TEDAKEFA+RENLFFMETSALE+TNVE AF+TVLTEIYRI+SKK+LV
Sbjct: 130 GNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLV 189

Query: 362 AN-ETESGGNSSLLKGTKIVVPGQEPEAAKSKPMCCVS 472
           AN E +S GNSSLLKGTKIVVPGQEP A  +K  CC+S
Sbjct: 190 ANEEVDSSGNSSLLKGTKIVVPGQEP-APPTKASCCMS 226


>ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
          Length = 222

 Score =  264 bits (675), Expect = 1e-68
 Identities = 136/158 (86%), Positives = 146/158 (92%), Gaps = 1/158 (0%)
 Frame = +2

Query: 2   QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLI 181
           QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDH+ARWLEELRGHADKNIVIMLI
Sbjct: 67  QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLI 126

Query: 182 GNKSDLGTLRSVSTEDAKEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLV 361
           GNKSDLG+LR V TEDAKEFAQ ENL FMETSALEATNVE AF T+LTEIYR+ISKK+L+
Sbjct: 127 GNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALI 186

Query: 362 AN-ETESGGNSSLLKGTKIVVPGQEPEAAKSKPMCCVS 472
           AN ET+SGG+SSLLKGTKIVVPGQEP+AA S   CC S
Sbjct: 187 ANDETDSGGSSSLLKGTKIVVPGQEPQAASSG--CCRS 222


>ref|XP_002298447.1| predicted protein [Populus trichocarpa] gi|222845705|gb|EEE83252.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  263 bits (672), Expect = 3e-68
 Identities = 132/158 (83%), Positives = 144/158 (91%)
 Frame = +2

Query: 2   QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLI 181
           QIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDHVA+WLEELR HAD NIVIMLI
Sbjct: 68  QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLI 127

Query: 182 GNKSDLGTLRSVSTEDAKEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLV 361
           GNKSDLGTLR+V TEDAKEFAQ+ENLFFMETSALEATNVE+AFL+VLTEIYR+ISKK+L+
Sbjct: 128 GNKSDLGTLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALI 187

Query: 362 ANETESGGNSSLLKGTKIVVPGQEPEAAKSKPMCCVSS 475
           ANE ESGG+SSLLKGT IVVP QEP +      CC +S
Sbjct: 188 ANEQESGGSSSLLKGTNIVVPEQEPVSGGRSFSCCGTS 225


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