BLASTX nr result

ID: Coptis24_contig00018775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018775
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518659.1| PREDICTED: ABC transporter B family member 2...   213   2e-53
ref|XP_003552676.1| PREDICTED: ABC transporter B family member 2...   213   3e-53
emb|CBI16194.3| unnamed protein product [Vitis vinifera]              211   9e-53
ref|XP_002284435.1| PREDICTED: ABC transporter B family member 2...   211   9e-53
ref|XP_002316309.1| multidrug/pheromone exporter, MDR family, AB...   208   1e-51

>ref|XP_003518659.1| PREDICTED: ABC transporter B family member 20-like [Glycine max]
          Length = 1402

 Score =  213 bits (543), Expect = 2e-53
 Identities = 108/172 (62%), Positives = 126/172 (73%)
 Frame = +2

Query: 203 MMISRGLFGWSPPHIQPLTXXXXXXXXXXXXXXYLDSSIEPNELVDGREDDNGMDDNEEL 382
           MM+SRGLFGWSPPH+QPLT              YLD S E +      E +  M++ EE+
Sbjct: 1   MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPSAETSASQQ-LEAEEEMEEPEEI 59

Query: 383 EPPPAAVPFSRLFACADGFDWFLMSIGSVAAAAHGTALIVYLHFFGKVIQLLSLHASSGK 562
           EPPPAAVPFS+LFACAD FDWFLM++GSVAAAAHGTAL++YLH+F K+I +L L    G 
Sbjct: 60  EPPPAAVPFSQLFACADRFDWFLMAVGSVAAAAHGTALVLYLHYFAKIIHVLRLDPPHG- 118

Query: 563 TLTPNDLFDEFSKHALYIVYIAIGVFAAGWIEVSCWILTGERQTAVIRSKYV 718
             T  + FD F++ AL IVYIA GVF AGWIEVSCWILTGERQTAVIRSKYV
Sbjct: 119 --TSQEQFDRFTELALTIVYIAAGVFVAGWIEVSCWILTGERQTAVIRSKYV 168


>ref|XP_003552676.1| PREDICTED: ABC transporter B family member 20-like [Glycine max]
          Length = 1402

 Score =  213 bits (542), Expect = 3e-53
 Identities = 109/174 (62%), Positives = 128/174 (73%), Gaps = 2/174 (1%)
 Frame = +2

Query: 203 MMISRGLFGWSPPHIQPLTXXXXXXXXXXXXXXYLDSSIEPN--ELVDGREDDNGMDDNE 376
           MM+SRGLFGWSPPH+QPLT              YLD   E +  + V+  E+   M++ E
Sbjct: 1   MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQVEAEEE---MEEPE 57

Query: 377 ELEPPPAAVPFSRLFACADGFDWFLMSIGSVAAAAHGTALIVYLHFFGKVIQLLSLHASS 556
           E+EPPPAAVPFS+LFACAD FDWFLM+IGSVAAAAHGTAL+VYLH+F K+I +L L   +
Sbjct: 58  EIEPPPAAVPFSQLFACADRFDWFLMAIGSVAAAAHGTALVVYLHYFAKIIHVLRLDPPN 117

Query: 557 GKTLTPNDLFDEFSKHALYIVYIAIGVFAAGWIEVSCWILTGERQTAVIRSKYV 718
           G   T  + FD F++ AL IVYIA GVF AGWIEVSCWILTGERQTAVIRS YV
Sbjct: 118 G---TSQEQFDRFTELALTIVYIAAGVFVAGWIEVSCWILTGERQTAVIRSNYV 168


>emb|CBI16194.3| unnamed protein product [Vitis vinifera]
          Length = 1136

 Score =  211 bits (538), Expect = 9e-53
 Identities = 108/172 (62%), Positives = 124/172 (72%)
 Frame = +2

Query: 203 MMISRGLFGWSPPHIQPLTXXXXXXXXXXXXXXYLDSSIEPNELVDGREDDNGMDDNEEL 382
           MMISRGLFGWSPPHIQPLT              YL+ S +        EDD  +D+ EE+
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLEQSNDAGPAP--AEDDQEIDEGEEM 58

Query: 383 EPPPAAVPFSRLFACADGFDWFLMSIGSVAAAAHGTALIVYLHFFGKVIQLLSLHASSGK 562
           E PPAAVPFSRLFACAD  DW LM +GSVAAAAHG AL++YLHFFGKVIQLLS       
Sbjct: 59  EQPPAAVPFSRLFACADRLDWVLMIVGSVAAAAHGAALVIYLHFFGKVIQLLSYRHPE-- 116

Query: 563 TLTPNDLFDEFSKHALYIVYIAIGVFAAGWIEVSCWILTGERQTAVIRSKYV 718
               ++LF +F++H+L+I+YIA GVF AGWIEV CWILTGERQTAVIRSKYV
Sbjct: 117 --ESDELFQKFNQHSLHIIYIASGVFLAGWIEVWCWILTGERQTAVIRSKYV 166


>ref|XP_002284435.1| PREDICTED: ABC transporter B family member 20-like isoform 1 [Vitis
           vinifera]
          Length = 1405

 Score =  211 bits (538), Expect = 9e-53
 Identities = 108/172 (62%), Positives = 124/172 (72%)
 Frame = +2

Query: 203 MMISRGLFGWSPPHIQPLTXXXXXXXXXXXXXXYLDSSIEPNELVDGREDDNGMDDNEEL 382
           MMISRGLFGWSPPHIQPLT              YL+ S +        EDD  +D+ EE+
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLEQSNDAGPAP--AEDDQEIDEGEEM 58

Query: 383 EPPPAAVPFSRLFACADGFDWFLMSIGSVAAAAHGTALIVYLHFFGKVIQLLSLHASSGK 562
           E PPAAVPFSRLFACAD  DW LM +GSVAAAAHG AL++YLHFFGKVIQLLS       
Sbjct: 59  EQPPAAVPFSRLFACADRLDWVLMIVGSVAAAAHGAALVIYLHFFGKVIQLLSYRHPE-- 116

Query: 563 TLTPNDLFDEFSKHALYIVYIAIGVFAAGWIEVSCWILTGERQTAVIRSKYV 718
               ++LF +F++H+L+I+YIA GVF AGWIEV CWILTGERQTAVIRSKYV
Sbjct: 117 --ESDELFQKFNQHSLHIIYIASGVFLAGWIEVWCWILTGERQTAVIRSKYV 166


>ref|XP_002316309.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222865349|gb|EEF02480.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1397

 Score =  208 bits (529), Expect = 1e-51
 Identities = 105/172 (61%), Positives = 122/172 (70%)
 Frame = +2

Query: 203 MMISRGLFGWSPPHIQPLTXXXXXXXXXXXXXXYLDSSIEPNELVDGREDDNGMDDNEEL 382
           MMI RGLFGWSPPHIQPLT              YLD+S E        E +  +D+ EE+
Sbjct: 1   MMIPRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDASAEAAAAAAQAEAEEEIDEAEEM 60

Query: 383 EPPPAAVPFSRLFACADGFDWFLMSIGSVAAAAHGTALIVYLHFFGKVIQLLSLHASSGK 562
           E PPAAVPFSRLFACAD  DW LM +GS+AAAAHGTAL+VYLHFFGK+I +L +      
Sbjct: 61  EAPPAAVPFSRLFACADRLDWGLMIVGSLAAAAHGTALVVYLHFFGKIIGVLRIQ----- 115

Query: 563 TLTPNDLFDEFSKHALYIVYIAIGVFAAGWIEVSCWILTGERQTAVIRSKYV 718
                + FD F+  A++IVY+A+GVFAAGWIEVSCWILTGERQTAVIRSKYV
Sbjct: 116 ---QGERFDRFTNLAMHIVYLAVGVFAAGWIEVSCWILTGERQTAVIRSKYV 164


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