BLASTX nr result
ID: Coptis24_contig00018773
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018773 (729 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22168.3| unnamed protein product [Vitis vinifera] 312 4e-83 ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, ... 312 4e-83 ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus ... 311 1e-82 ref|XP_004148706.1| PREDICTED: translation factor GUF1 homolog, ... 306 3e-81 ref|XP_004162590.1| PREDICTED: LOW QUALITY PROTEIN: translation ... 304 1e-80 >emb|CBI22168.3| unnamed protein product [Vitis vinifera] Length = 516 Score = 312 bits (800), Expect = 4e-83 Identities = 157/180 (87%), Positives = 167/180 (92%) Frame = -3 Query: 727 PVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVDFYNELKSITSGYASFDYEDADY 548 PVITLCS+RRG+QLEYSFIDSQRAFMKYR+PLREIVVDFYNELKSITSGYASFDYEDA+Y Sbjct: 337 PVITLCSERRGEQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSITSGYASFDYEDAEY 396 Query: 547 QTSDLVKLDILLNGQPVDAMATIVHNLKAQRIGREMVDKLKKFIDRQMFEXXXXXXXXXX 368 Q SDLVKLDILLNGQPVDAMATIVHNLKAQR+GRE+V+KLKKFIDRQMFE Sbjct: 397 QASDLVKLDILLNGQPVDAMATIVHNLKAQRVGRELVEKLKKFIDRQMFEIVIQAAIGSK 456 Query: 367 XXARETLSAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDVPQEAFHELLKVS 188 ARET+SAMRKNVLAKCYGGDV+RKRKLLEKQKEGKKRMKRVGSVD+PQEAFHELLKVS Sbjct: 457 IIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 516 >ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, mitochondrial [Vitis vinifera] Length = 681 Score = 312 bits (800), Expect = 4e-83 Identities = 157/180 (87%), Positives = 167/180 (92%) Frame = -3 Query: 727 PVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVDFYNELKSITSGYASFDYEDADY 548 PVITLCS+RRG+QLEYSFIDSQRAFMKYR+PLREIVVDFYNELKSITSGYASFDYEDA+Y Sbjct: 502 PVITLCSERRGEQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSITSGYASFDYEDAEY 561 Query: 547 QTSDLVKLDILLNGQPVDAMATIVHNLKAQRIGREMVDKLKKFIDRQMFEXXXXXXXXXX 368 Q SDLVKLDILLNGQPVDAMATIVHNLKAQR+GRE+V+KLKKFIDRQMFE Sbjct: 562 QASDLVKLDILLNGQPVDAMATIVHNLKAQRVGRELVEKLKKFIDRQMFEIVIQAAIGSK 621 Query: 367 XXARETLSAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDVPQEAFHELLKVS 188 ARET+SAMRKNVLAKCYGGDV+RKRKLLEKQKEGKKRMKRVGSVD+PQEAFHELLKVS Sbjct: 622 IIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 681 >ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus communis] gi|317411652|sp|B9RUN8.1|GUF1_RICCO RecName: Full=Translation factor GUF1 homolog, mitochondrial; AltName: Full=Elongation factor 4 homolog; Short=EF-4; AltName: Full=GTPase GUF1 homolog; AltName: Full=Ribosomal back-translocase; Flags: Precursor gi|223543494|gb|EEF45025.1| GTP-binding protein lepA, putative [Ricinus communis] Length = 673 Score = 311 bits (796), Expect = 1e-82 Identities = 156/180 (86%), Positives = 167/180 (92%) Frame = -3 Query: 727 PVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVDFYNELKSITSGYASFDYEDADY 548 PVITLCS+RRGQQLEYSFIDSQRAFMKYR+PLREIVVDFYNELKSITSGYASFDYED++Y Sbjct: 494 PVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSITSGYASFDYEDSEY 553 Query: 547 QTSDLVKLDILLNGQPVDAMATIVHNLKAQRIGREMVDKLKKFIDRQMFEXXXXXXXXXX 368 Q ++LVKLDILLNGQPVDAMATIVHNLKAQR+GRE+VDKLKKFIDRQMFE Sbjct: 554 QEAELVKLDILLNGQPVDAMATIVHNLKAQRVGRELVDKLKKFIDRQMFEITIQAAIGSK 613 Query: 367 XXARETLSAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDVPQEAFHELLKVS 188 ARET+SAMRKNVLAKCYGGDV+RKRKLLEKQKEGKKRMKRVGSVD+PQEAFHELLKVS Sbjct: 614 VVARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 673 >ref|XP_004148706.1| PREDICTED: translation factor GUF1 homolog, mitochondrial-like [Cucumis sativus] Length = 766 Score = 306 bits (784), Expect = 3e-81 Identities = 154/179 (86%), Positives = 166/179 (92%) Frame = -3 Query: 724 VITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVDFYNELKSITSGYASFDYEDADYQ 545 VITLCS+RRGQQLEYSFIDSQRAFMKYR+PLREIVVDFYNELKSITSGYASFDYED++YQ Sbjct: 588 VITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSITSGYASFDYEDSEYQ 647 Query: 544 TSDLVKLDILLNGQPVDAMATIVHNLKAQRIGREMVDKLKKFIDRQMFEXXXXXXXXXXX 365 +DLVKLDILLNGQPVDAMATIVHNLKAQR+GRE+VDKLKKFIDRQMFE Sbjct: 648 EADLVKLDILLNGQPVDAMATIVHNLKAQRVGRELVDKLKKFIDRQMFEISIQAAIGSKI 707 Query: 364 XARETLSAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDVPQEAFHELLKVS 188 ARET+SAMRKNVLAKCYGGDV+RKRKLLEKQKEGKKRMKRVGSVD+PQEAF+E+LKVS Sbjct: 708 IARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFNEILKVS 766 >ref|XP_004162590.1| PREDICTED: LOW QUALITY PROTEIN: translation factor GUF1 homolog, mitochondrial-like [Cucumis sativus] Length = 766 Score = 304 bits (778), Expect = 1e-80 Identities = 153/179 (85%), Positives = 165/179 (92%) Frame = -3 Query: 724 VITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVDFYNELKSITSGYASFDYEDADYQ 545 VITLCS+RRGQQLEYSFIDSQRAFMKYR+PLREIVVDFYNELKSITSGYASFDYED++YQ Sbjct: 588 VITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSITSGYASFDYEDSEYQ 647 Query: 544 TSDLVKLDILLNGQPVDAMATIVHNLKAQRIGREMVDKLKKFIDRQMFEXXXXXXXXXXX 365 +DLVKLDILLNGQPVDAMATIVHNLKAQR+GRE+VDKLKKFIDRQMFE Sbjct: 648 EADLVKLDILLNGQPVDAMATIVHNLKAQRVGRELVDKLKKFIDRQMFEISIQAAIGSKI 707 Query: 364 XARETLSAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDVPQEAFHELLKVS 188 ARET+SAMRKNVLAKCYGGDV+RKRKLLEKQKEG KRMKRVGSVD+PQEAF+E+LKVS Sbjct: 708 IARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGXKRMKRVGSVDIPQEAFNEILKVS 766