BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018763
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   381   e-103
emb|CBI30711.3| unnamed protein product [Vitis vinifera]              381   e-103
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   372   e-101
ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2...   368   2e-99
ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containi...   367   4e-99

>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  381 bits (978), Expect = e-103
 Identities = 179/234 (76%), Positives = 200/234 (85%)
 Frame = +1

Query: 1    HYACMVDLLARAGRLAKAYKFIEAMPIKPDSTIWGALLCGCRTHRDVNLAEKVAEKVFEL 180
            HYAC+VDLLARAG L+KAYKFI+ MPI+PD+TIWGALLCGCR + DV LAEKVAE VFEL
Sbjct: 591  HYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFEL 650

Query: 181  ELDNTGYYILLANIYAEAEKWAEVKKLRERIGRRGLRKKPGCSWIEVRSKFHVFVASDRS 360
            E +NTGYY+LLANIYAEAEKW EVKKLRERIGRRGLRK PGCSWIE++ K H+FV  D S
Sbjct: 651  EPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSS 710

Query: 361  HQQAKKMESLLARVRMRMKDEGCLPDNRYALIIASDTEKEEVLCGHSEKLAMAYGILNLP 540
            H  A K+E LL + R RMK+EG  P  RYALI A DTEKE  LCGHSEK+AMA+GIL+LP
Sbjct: 711  HPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLP 770

Query: 541  YGKTVRVTKNLRVCGDCHEMAKFMSKMFAKEIVLRDSNRFHHFNDGRCSCRGYW 702
             GKTVRVTKNLRVCGDCHEMAKFMSKM  ++I+LRDSNRFHHF DG CSCRG+W
Sbjct: 771  PGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824


>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  381 bits (978), Expect = e-103
 Identities = 179/234 (76%), Positives = 200/234 (85%)
 Frame = +1

Query: 1    HYACMVDLLARAGRLAKAYKFIEAMPIKPDSTIWGALLCGCRTHRDVNLAEKVAEKVFEL 180
            HYAC+VDLLARAG L+KAYKFI+ MPI+PD+TIWGALLCGCR + DV LAEKVAE VFEL
Sbjct: 464  HYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFEL 523

Query: 181  ELDNTGYYILLANIYAEAEKWAEVKKLRERIGRRGLRKKPGCSWIEVRSKFHVFVASDRS 360
            E +NTGYY+LLANIYAEAEKW EVKKLRERIGRRGLRK PGCSWIE++ K H+FV  D S
Sbjct: 524  EPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSS 583

Query: 361  HQQAKKMESLLARVRMRMKDEGCLPDNRYALIIASDTEKEEVLCGHSEKLAMAYGILNLP 540
            H  A K+E LL + R RMK+EG  P  RYALI A DTEKE  LCGHSEK+AMA+GIL+LP
Sbjct: 584  HPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLP 643

Query: 541  YGKTVRVTKNLRVCGDCHEMAKFMSKMFAKEIVLRDSNRFHHFNDGRCSCRGYW 702
             GKTVRVTKNLRVCGDCHEMAKFMSKM  ++I+LRDSNRFHHF DG CSCRG+W
Sbjct: 644  PGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
            gi|449500809|ref|XP_004161200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  372 bits (955), Expect = e-101
 Identities = 172/234 (73%), Positives = 201/234 (85%)
 Frame = +1

Query: 1    HYACMVDLLARAGRLAKAYKFIEAMPIKPDSTIWGALLCGCRTHRDVNLAEKVAEKVFEL 180
            HYACMVDLLAR G L KA+KFI+AMPIKPD+TIWGALLCGCR H DV LAEKVAE++FEL
Sbjct: 693  HYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFEL 752

Query: 181  ELDNTGYYILLANIYAEAEKWAEVKKLRERIGRRGLRKKPGCSWIEVRSKFHVFVASDRS 360
            E +NTGYY+LLANIYAEAEKW EV+KLR++IG+RGL+K PGCSWIE++ K ++FVA D S
Sbjct: 753  EPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCS 812

Query: 361  HQQAKKMESLLARVRMRMKDEGCLPDNRYALIIASDTEKEEVLCGHSEKLAMAYGILNLP 540
              QAKK+E LL R+R +MK+EG  P   YAL+ A + EKE  LCGHSEKLAMA+G+LNLP
Sbjct: 813  KPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLP 872

Query: 541  YGKTVRVTKNLRVCGDCHEMAKFMSKMFAKEIVLRDSNRFHHFNDGRCSCRGYW 702
             GKT+RVTKNLRVCGDCHEMAKFMSK  ++EI+LRDS+RFHHF DG CSCRGYW
Sbjct: 873  PGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926


>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
            predicted protein [Populus trichocarpa]
          Length = 571

 Score =  368 bits (944), Expect = 2e-99
 Identities = 171/234 (73%), Positives = 199/234 (85%)
 Frame = +1

Query: 1    HYACMVDLLARAGRLAKAYKFIEAMPIKPDSTIWGALLCGCRTHRDVNLAEKVAEKVFEL 180
            HYAC+VDLLAR+G+LA AYKFI++MPI+PD+TIWGALL GCR H DV LAEKVAE VFEL
Sbjct: 338  HYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFEL 397

Query: 181  ELDNTGYYILLANIYAEAEKWAEVKKLRERIGRRGLRKKPGCSWIEVRSKFHVFVASDRS 360
            E +NTGYY+LLAN YAEAEKW EVKKLR++IGRRGL+K PGCSWIEV+SK H+F+A + S
Sbjct: 398  EPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSS 457

Query: 361  HQQAKKMESLLARVRMRMKDEGCLPDNRYALIIASDTEKEEVLCGHSEKLAMAYGILNLP 540
            H QAKK+E LL R+R +MK+EG  P  RYALI A   +KE  LCGHSEKLAMA+GILNLP
Sbjct: 458  HPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLP 517

Query: 541  YGKTVRVTKNLRVCGDCHEMAKFMSKMFAKEIVLRDSNRFHHFNDGRCSCRGYW 702
              +T+RV+KNLRVCGDCHEMAKF+SK   +EIVLRDSNRFHHF DG C CRG+W
Sbjct: 518  PARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571


>ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  367 bits (941), Expect = 4e-99
 Identities = 174/234 (74%), Positives = 194/234 (82%)
 Frame = +1

Query: 1    HYACMVDLLARAGRLAKAYKFIEAMPIKPDSTIWGALLCGCRTHRDVNLAEKVAEKVFEL 180
            HYACMVDLLAR G L+KAY  IE MPIKPD+TIWGALLCGCR H DV LAEKVAE VFEL
Sbjct: 994  HYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFEL 1053

Query: 181  ELDNTGYYILLANIYAEAEKWAEVKKLRERIGRRGLRKKPGCSWIEVRSKFHVFVASDRS 360
            E DN GYY+LLANIYAEAEKW EVKKLRERIG+RGL+K PGCSWIEV+ KF  FV++D +
Sbjct: 1054 EPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTA 1113

Query: 361  HQQAKKMESLLARVRMRMKDEGCLPDNRYALIIASDTEKEEVLCGHSEKLAMAYGILNLP 540
            H QAK + SLL  +R++MK+EG  P  RYALI A D EKE  LCGHSEKLAMA+GILNLP
Sbjct: 1114 HPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLP 1173

Query: 541  YGKTVRVTKNLRVCGDCHEMAKFMSKMFAKEIVLRDSNRFHHFNDGRCSCRGYW 702
             G+T+RV KNLRVC DCHEMAKFMSK   +EI+LRDSNRFHHF DG CSCR +W
Sbjct: 1174 SGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227