BLASTX nr result

ID: Coptis24_contig00018760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018760
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably ina...   221   1e-55
emb|CBI29890.3| unnamed protein product [Vitis vinifera]              216   3e-54
ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, ...   209   6e-52
ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|2...   208   1e-51
ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50

>ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably inactive leucine-rich repeat
            receptor-like protein kinase At5g06940-like [Vitis
            vinifera]
          Length = 887

 Score =  221 bits (563), Expect = 1e-55
 Identities = 110/158 (69%), Positives = 136/158 (86%), Gaps = 2/158 (1%)
 Frame = -2

Query: 715  LHGNFKSSNILLDMDCEPKLTEFSLYRIIGEKAYQSSIASESCY--HIAPEHAYSKKATE 542
            LH N KS NILLD D EPKLT+F+L RI+GE A+QS++ASES +  +IAPE+ YSK+ATE
Sbjct: 712  LHRNLKSKNILLDADLEPKLTDFALDRIVGETAFQSTMASESAFSCYIAPENGYSKRATE 771

Query: 541  KMDVYSFGVVLLELVTGKQAEQEESGDSIDVVRWVRRKINTKNGAIQVLDPRISDSSKQE 362
            +MDVYSFGVVLLELVTG+QAEQ ES +SID+V+WVRRKIN  +GA+QVLDP+IS+SS+QE
Sbjct: 772  QMDVYSFGVVLLELVTGRQAEQAESAESIDIVKWVRRKINITDGALQVLDPKISNSSQQE 831

Query: 361  MLAALEIALSCTSIMPEKRPMMLEVVRSIQYIHSRNHI 248
            ML ALE+AL CTS+MPEKRP M EVVR++Q + S+ HI
Sbjct: 832  MLGALEMALRCTSVMPEKRPTMFEVVRALQSLSSKTHI 869


>emb|CBI29890.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  216 bits (551), Expect = 3e-54
 Identities = 108/155 (69%), Positives = 134/155 (86%), Gaps = 2/155 (1%)
 Frame = -2

Query: 715  LHGNFKSSNILLDMDCEPKLTEFSLYRIIGEKAYQSSIASESCY--HIAPEHAYSKKATE 542
            LH N KS NILLD D EPKLT+F+L RI+GE A+QS++ASES +  +IAPE+ YSK+ATE
Sbjct: 559  LHRNLKSKNILLDADLEPKLTDFALDRIVGETAFQSTMASESAFSCYIAPENGYSKRATE 618

Query: 541  KMDVYSFGVVLLELVTGKQAEQEESGDSIDVVRWVRRKINTKNGAIQVLDPRISDSSKQE 362
            +MDVYSFGVVLLELVTG+QAEQ ES +SID+V+WVRRKIN  +GA+QVLDP+IS+SS+QE
Sbjct: 619  QMDVYSFGVVLLELVTGRQAEQAESAESIDIVKWVRRKINITDGALQVLDPKISNSSQQE 678

Query: 361  MLAALEIALSCTSIMPEKRPMMLEVVRSIQYIHSR 257
            ML ALE+AL CTS+MPEKRP M EVVR++Q + S+
Sbjct: 679  MLGALEMALRCTSVMPEKRPTMFEVVRALQSLSSK 713


>ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
            communis] gi|223533938|gb|EEF35663.1| Receptor protein
            kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 891

 Score =  209 bits (531), Expect = 6e-52
 Identities = 105/159 (66%), Positives = 132/159 (83%), Gaps = 3/159 (1%)
 Frame = -2

Query: 715  LHGNFKSSNILLDMDCEPKLTEFSLYRIIGEKAYQSSIASES---CYHIAPEHAYSKKAT 545
            LH N KS NILLD + EPKLT+F+L RI+GE A++S+IASES   CY+ APE  YSKKAT
Sbjct: 718  LHRNVKSKNILLDAEFEPKLTDFALDRILGEAAFRSTIASESADSCYN-APELGYSKKAT 776

Query: 544  EKMDVYSFGVVLLELVTGKQAEQEESGDSIDVVRWVRRKINTKNGAIQVLDPRISDSSKQ 365
            E+MDVYSFGVVLLEL+TG+QAEQ E  +S+D+V+WVRRKIN  NGA+Q+LDP+IS+S +Q
Sbjct: 777  EQMDVYSFGVVLLELITGRQAEQAEPTESLDIVKWVRRKINITNGAVQILDPKISNSFQQ 836

Query: 364  EMLAALEIALSCTSIMPEKRPMMLEVVRSIQYIHSRNHI 248
            EML AL+IA+ CTS+MPEKRP M+EVVR +  + SR H+
Sbjct: 837  EMLGALDIAIRCTSVMPEKRPQMVEVVRGLLSLSSRTHL 875


>ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|222867933|gb|EEF05064.1|
            predicted protein [Populus trichocarpa]
          Length = 887

 Score =  208 bits (529), Expect = 1e-51
 Identities = 101/160 (63%), Positives = 135/160 (84%), Gaps = 3/160 (1%)
 Frame = -2

Query: 715  LHGNFKSSNILLDMDCEPKLTEFSLYRIIGEKAYQSSIASES---CYHIAPEHAYSKKAT 545
            LH N KS+NILLD D EPKLT+F+L RI+GE ++Q+++ASES   CY+ APE  Y+KKAT
Sbjct: 715  LHRNIKSTNILLDADFEPKLTDFALDRIVGEASFQTTVASESANSCYN-APECGYTKKAT 773

Query: 544  EKMDVYSFGVVLLELVTGKQAEQEESGDSIDVVRWVRRKINTKNGAIQVLDPRISDSSKQ 365
            E+MDVYSFGVVLLEL+ G+QA++ E  DS+D+V+WVRRKIN  NGA+QVLD +IS+SS+Q
Sbjct: 774  EQMDVYSFGVVLLELIAGRQADRAEPADSVDIVKWVRRKINITNGAVQVLDSKISNSSQQ 833

Query: 364  EMLAALEIALSCTSIMPEKRPMMLEVVRSIQYIHSRNHIT 245
            EMLAAL+IA+ CTS++PEKRP MLEV+R++Q +  + H++
Sbjct: 834  EMLAALDIAIRCTSVLPEKRPSMLEVIRALQSLGPKTHVS 873


>ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|222872917|gb|EEF10048.1|
            predicted protein [Populus trichocarpa]
          Length = 883

 Score =  204 bits (519), Expect = 1e-50
 Identities = 103/159 (64%), Positives = 133/159 (83%), Gaps = 2/159 (1%)
 Frame = -2

Query: 715  LHGNFKSSNILLDMDCEPKLTEFSLYRIIGEKAYQSSIASESCY--HIAPEHAYSKKATE 542
            LH N KS+NILLD D EPKLT+F+L RI+GE A+Q++IASES Y  + APE  Y+KKATE
Sbjct: 714  LHRNVKSTNILLDADFEPKLTDFALDRIVGEAAFQTTIASESAYSCYNAPECGYTKKATE 773

Query: 541  KMDVYSFGVVLLELVTGKQAEQEESGDSIDVVRWVRRKINTKNGAIQVLDPRISDSSKQE 362
            +MDVYSFGVVLLEL+ G+QA+Q ES   +D+V+WVRRKIN  NGA+QVLD +IS+SS+QE
Sbjct: 774  QMDVYSFGVVLLELIAGRQADQAES---VDIVKWVRRKINIANGAVQVLDSKISNSSQQE 830

Query: 361  MLAALEIALSCTSIMPEKRPMMLEVVRSIQYIHSRNHIT 245
            MLAAL+IA+ CTS++PEKRP MLEV R++Q + S+ H++
Sbjct: 831  MLAALDIAIYCTSVLPEKRPSMLEVTRALQSLGSKTHLS 869


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