BLASTX nr result

ID: Coptis24_contig00018753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018753
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541974.1| PREDICTED: protein HIRA-like [Glycine max]        177   8e-43
ref|XP_003540239.1| PREDICTED: protein HIRA-like [Glycine max]        177   8e-43
ref|XP_002263076.1| PREDICTED: protein HIRA [Vitis vinifera] gi|...   171   6e-41
tpg|DAA60702.1| TPA: hypothetical protein ZEAMMB73_950514 [Zea m...   170   1e-40
ref|XP_002523780.1| WD-repeat protein, putative [Ricinus communi...   169   2e-40

>ref|XP_003541974.1| PREDICTED: protein HIRA-like [Glycine max]
          Length = 1047

 Score =  177 bits (449), Expect = 8e-43
 Identities = 80/99 (80%), Positives = 91/99 (91%)
 Frame = +3

Query: 216 MIAEKPSWIRHGSMQIFSIDIQPGGLRFATGGGDHKVRIWNMKCMDVEPEHGPSTQKLLA 395
           MIAEKPSW+RH  MQIFSID+QPGGLRFATGGGDHKVRIWNMK +  + E+  S+Q+LLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKSVSTDLENDDSSQRLLA 60

Query: 396 TLRDHFGSVNCIRWARHGRHLASGSDDQVILIHERKPGS 512
           TLRDHFGSVNC+RWA+HGR++ASGSDDQVILIHERKPGS
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHERKPGS 99


>ref|XP_003540239.1| PREDICTED: protein HIRA-like [Glycine max]
          Length = 1031

 Score =  177 bits (449), Expect = 8e-43
 Identities = 80/99 (80%), Positives = 91/99 (91%)
 Frame = +3

Query: 216 MIAEKPSWIRHGSMQIFSIDIQPGGLRFATGGGDHKVRIWNMKCMDVEPEHGPSTQKLLA 395
           MIAEKPSW+RH  MQIFSID+QPGGLRFATGGGDHKVRIWNMK +  + E+  S+Q+LLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKSVSTDIENDASSQRLLA 60

Query: 396 TLRDHFGSVNCIRWARHGRHLASGSDDQVILIHERKPGS 512
           TLRDHFGSVNC+RWA+HGR++ASGSDDQVILIHERKPGS
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHERKPGS 99


>ref|XP_002263076.1| PREDICTED: protein HIRA [Vitis vinifera]
           gi|296084943|emb|CBI28352.3| unnamed protein product
           [Vitis vinifera]
          Length = 1036

 Score =  171 bits (433), Expect = 6e-41
 Identities = 80/99 (80%), Positives = 88/99 (88%)
 Frame = +3

Query: 216 MIAEKPSWIRHGSMQIFSIDIQPGGLRFATGGGDHKVRIWNMKCMDVEPEHGPSTQKLLA 395
           MIAEKPSWIRH  MQIFSIDIQPGGLRFATGGGDHKVRIWNMK +  + E+  S  +LLA
Sbjct: 1   MIAEKPSWIRHEGMQIFSIDIQPGGLRFATGGGDHKVRIWNMKSVGRDLENDESVHRLLA 60

Query: 396 TLRDHFGSVNCIRWARHGRHLASGSDDQVILIHERKPGS 512
           TLRDHFGSVNC+RWA+HGR++ASGSDDQVILIHE KPGS
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHEWKPGS 99


>tpg|DAA60702.1| TPA: hypothetical protein ZEAMMB73_950514 [Zea mays]
          Length = 969

 Score =  170 bits (430), Expect = 1e-40
 Identities = 79/99 (79%), Positives = 87/99 (87%)
 Frame = +3

Query: 216 MIAEKPSWIRHGSMQIFSIDIQPGGLRFATGGGDHKVRIWNMKCMDVEPEHGPSTQKLLA 395
           MIAEKP+WIRH  +QIFSIDIQPGGLRFATGGGD KVRIW+MK +D    H  S+Q LLA
Sbjct: 1   MIAEKPNWIRHEGLQIFSIDIQPGGLRFATGGGDQKVRIWSMKSVDKNNNHNDSSQGLLA 60

Query: 396 TLRDHFGSVNCIRWARHGRHLASGSDDQVILIHERKPGS 512
           T+RDHFGSVNC+RWARHGR+LASGSDDQVILIHERK GS
Sbjct: 61  TMRDHFGSVNCVRWARHGRYLASGSDDQVILIHERKAGS 99


>ref|XP_002523780.1| WD-repeat protein, putative [Ricinus communis]
           gi|223536868|gb|EEF38506.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 893

 Score =  169 bits (429), Expect = 2e-40
 Identities = 77/99 (77%), Positives = 87/99 (87%)
 Frame = +3

Query: 216 MIAEKPSWIRHGSMQIFSIDIQPGGLRFATGGGDHKVRIWNMKCMDVEPEHGPSTQKLLA 395
           MIAEKPSW++H  MQIFSIDIQPG LRFATGGGDHKVRIWNMK +  +      TQ+LLA
Sbjct: 1   MIAEKPSWVKHEGMQIFSIDIQPGALRFATGGGDHKVRIWNMKSVSRDLADNEPTQRLLA 60

Query: 396 TLRDHFGSVNCIRWARHGRHLASGSDDQVILIHERKPGS 512
           TLRDHFGSVNC+RWA+HGR++ASGSDDQVIL+HERKPGS
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQVILVHERKPGS 99


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