BLASTX nr result

ID: Coptis24_contig00018723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018723
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320397.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_004167028.1| PREDICTED: uncharacterized LOC101223129 [Cuc...   109   3e-22
ref|XP_004145621.1| PREDICTED: uncharacterized protein LOC101223...   109   3e-22
ref|XP_003548044.1| PREDICTED: uncharacterized protein LOC100812...   107   1e-21
gb|AFK45775.1| unknown [Lotus japonicus]                              105   4e-21

>ref|XP_002320397.1| predicted protein [Populus trichocarpa] gi|222861170|gb|EEE98712.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  118 bits (296), Expect = 6e-25
 Identities = 56/91 (61%), Positives = 72/91 (79%)
 Frame = -2

Query: 573 RSFGHAMMIKLSSIVTKAKTACALSFGLGEDSISASSLFVMPMVSSRMTGFRGTSLNRAK 394
           RSF  AM+IK+  ++ KAKTAC+LS G GEDSI+AS++ VMPMVSS++TGFRGT  +R K
Sbjct: 353 RSFAQAMVIKIKEVLAKAKTACSLSLGFGEDSINASAVLVMPMVSSKITGFRGTVFDRPK 412

Query: 393 FFSLKNPSWSKIPMDDDDTEMLETSNMLAQS 301
           FFSL+N  WSKI MDDD   +LET+ +L Q+
Sbjct: 413 FFSLRNSGWSKISMDDDGVNVLETNPVLPQT 443


>ref|XP_004167028.1| PREDICTED: uncharacterized LOC101223129 [Cucumis sativus]
          Length = 444

 Score =  109 bits (273), Expect = 3e-22
 Identities = 48/91 (52%), Positives = 71/91 (78%)
 Frame = -2

Query: 573 RSFGHAMMIKLSSIVTKAKTACALSFGLGEDSISASSLFVMPMVSSRMTGFRGTSLNRAK 394
           +SF   +++K++ +V KAK A ALS G GEDS++AS++ VMPMVSSRMTGFRGT   R+K
Sbjct: 353 KSFSQGVLLKITDVVAKAKAALALSLGFGEDSLNASAILVMPMVSSRMTGFRGTGFERSK 412

Query: 393 FFSLKNPSWSKIPMDDDDTEMLETSNMLAQS 301
           FFS++ P WS+I +D++DT++L+T    +Q+
Sbjct: 413 FFSMRKPDWSRISLDEEDTKVLDTDIGFSQN 443


>ref|XP_004145621.1| PREDICTED: uncharacterized protein LOC101223129 [Cucumis sativus]
          Length = 443

 Score =  109 bits (273), Expect = 3e-22
 Identities = 48/91 (52%), Positives = 71/91 (78%)
 Frame = -2

Query: 573 RSFGHAMMIKLSSIVTKAKTACALSFGLGEDSISASSLFVMPMVSSRMTGFRGTSLNRAK 394
           +SF   +++K++ +V KAK A ALS G GEDS++AS++ VMPMVSSRMTGFRGT   R+K
Sbjct: 352 KSFSQGVLLKITDVVAKAKAALALSLGFGEDSLNASAILVMPMVSSRMTGFRGTGFERSK 411

Query: 393 FFSLKNPSWSKIPMDDDDTEMLETSNMLAQS 301
           FFS++ P WS+I +D++DT++L+T    +Q+
Sbjct: 412 FFSMRKPDWSRISLDEEDTKVLDTDIGFSQN 442


>ref|XP_003548044.1| PREDICTED: uncharacterized protein LOC100812264 [Glycine max]
          Length = 443

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/91 (57%), Positives = 72/91 (79%)
 Frame = -2

Query: 573 RSFGHAMMIKLSSIVTKAKTACALSFGLGEDSISASSLFVMPMVSSRMTGFRGTSLNRAK 394
           RSF  A++IK++ ++ KAKT+CALS G GED+I+ SS+ VMPM+SSRMTGFRG  L RA+
Sbjct: 353 RSFVKAILIKVTDLLVKAKTSCALSLGFGEDTINTSSVLVMPMMSSRMTGFRGNGLERAR 412

Query: 393 FFSLKNPSWSKIPMDDDDTEMLETSNMLAQS 301
             S++N  WSKIPMD+D  ++LETS+++  S
Sbjct: 413 ILSMRN-GWSKIPMDEDAGKLLETSSVVPPS 442


>gb|AFK45775.1| unknown [Lotus japonicus]
          Length = 442

 Score =  105 bits (263), Expect = 4e-21
 Identities = 50/91 (54%), Positives = 71/91 (78%)
 Frame = -2

Query: 573 RSFGHAMMIKLSSIVTKAKTACALSFGLGEDSISASSLFVMPMVSSRMTGFRGTSLNRAK 394
           RSF   M IK++ ++ +AK + ALSFG GEDSI+ASS+ VMPM+SSR+TGFRGT ++R++
Sbjct: 351 RSFVKGMRIKITDMLAQAKASFALSFGFGEDSINASSVLVMPMMSSRITGFRGTGIDRSR 410

Query: 393 FFSLKNPSWSKIPMDDDDTEMLETSNMLAQS 301
             S++N  WSKIPMD+D  ++LETS ++  S
Sbjct: 411 MLSMRNYGWSKIPMDEDAGKLLETSQIVPPS 441


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