BLASTX nr result

ID: Coptis24_contig00018722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018722
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308448.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002323403.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002526911.1| short chain alcohol dehydrogenase, putative ...   110   2e-22
ref|XP_004170965.1| PREDICTED: zerumbone synthase-like, partial ...   107   1e-21
ref|XP_004143392.1| PREDICTED: zerumbone synthase-like [Cucumis ...   107   1e-21

>ref|XP_002308448.1| predicted protein [Populus trichocarpa] gi|222854424|gb|EEE91971.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/89 (65%), Positives = 74/89 (83%)
 Frame = -2

Query: 267 MKGASLVTPVFKRLEGKVALITGGASEIGESTARLYTQYGAKVVIADNQDVLGQLLCKEL 88
           MKG+SL+ PV KRLEGKVALITGGAS IGES  RL+ ++GAKVVIAD QD LG  +C+E+
Sbjct: 1   MKGSSLLAPVSKRLEGKVALITGGASGIGESCTRLFVRHGAKVVIADIQDDLGHSVCEEI 60

Query: 87  GRDETISYIHCDVTKENEVKDAVNFTKSK 1
           G +E++SY+HCDVT+E++V+ AVN   SK
Sbjct: 61  GSNESLSYVHCDVTRESDVEKAVNTAVSK 89


>ref|XP_002323403.1| predicted protein [Populus trichocarpa] gi|222868033|gb|EEF05164.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  111 bits (278), Expect = 5e-23
 Identities = 58/89 (65%), Positives = 69/89 (77%)
 Frame = -2

Query: 267 MKGASLVTPVFKRLEGKVALITGGASEIGESTARLYTQYGAKVVIADNQDVLGQLLCKEL 88
           M   S VT   KRLEGKVALITGGAS IGE +ARL+ Q+GAKV+IAD QD LG+ LCK L
Sbjct: 1   MNSDSSVTLATKRLEGKVALITGGASGIGECSARLFVQHGAKVLIADIQDDLGEALCKNL 60

Query: 87  GRDETISYIHCDVTKENEVKDAVNFTKSK 1
           G  E+ISYIHCDVT +++VK+AV+   SK
Sbjct: 61  GSQESISYIHCDVTCDSDVKNAVDMAVSK 89


>ref|XP_002526911.1| short chain alcohol dehydrogenase, putative [Ricinus communis]
           gi|223533730|gb|EEF35464.1| short chain alcohol
           dehydrogenase, putative [Ricinus communis]
          Length = 282

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/90 (64%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = -2

Query: 267 MKGASLVTPVFKRLEGKVALITGGASEIGESTARLYTQYGAKVVIADNQDVLGQLLCKEL 88
           M  +S  T + KRLEGKVALITGGAS +GES+ARL+ ++GAKVV+AD QD LG  LCKEL
Sbjct: 1   MSTSSSSTSIAKRLEGKVALITGGASGMGESSARLFVKHGAKVVVADVQDELGYSLCKEL 60

Query: 87  GRD-ETISYIHCDVTKENEVKDAVNFTKSK 1
           G D E ISYIHCDVT +++V++AV+F  SK
Sbjct: 61  GSDQEIISYIHCDVTCDSDVQNAVDFAVSK 90


>ref|XP_004170965.1| PREDICTED: zerumbone synthase-like, partial [Cucumis sativus]
          Length = 281

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/74 (68%), Positives = 64/74 (86%)
 Frame = -2

Query: 234 KRLEGKVALITGGASEIGESTARLYTQYGAKVVIADNQDVLGQLLCKELGRDETISYIHC 55
           KRL GKVALITG AS  G+STARL+ Q+GA+VV+AD QD L Q LCKELG +ET+SYIHC
Sbjct: 9   KRLNGKVALITGAASGFGKSTARLFVQHGARVVLADVQDNLAQPLCKELGSEETVSYIHC 68

Query: 54  DVTKENEVKDAVNF 13
           DVT++++VK+AV+F
Sbjct: 69  DVTRDSDVKEAVDF 82


>ref|XP_004143392.1| PREDICTED: zerumbone synthase-like [Cucumis sativus]
          Length = 284

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/74 (68%), Positives = 64/74 (86%)
 Frame = -2

Query: 234 KRLEGKVALITGGASEIGESTARLYTQYGAKVVIADNQDVLGQLLCKELGRDETISYIHC 55
           KRL GKVALITG AS  G+STARL+ Q+GA+VV+AD QD L Q LCKELG +ET+SYIHC
Sbjct: 9   KRLNGKVALITGAASGFGKSTARLFVQHGARVVLADVQDNLAQPLCKELGSEETVSYIHC 68

Query: 54  DVTKENEVKDAVNF 13
           DVT++++VK+AV+F
Sbjct: 69  DVTRDSDVKEAVDF 82


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