BLASTX nr result

ID: Coptis24_contig00018718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018718
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22951.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [...   150   1e-34
ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [...   149   2e-34
ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [...   149   3e-34
ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [...   148   4e-34

>emb|CBI22951.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/77 (93%), Positives = 75/77 (97%)
 Frame = +2

Query: 2   LEPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLNSFADKGGAQLYVPPGKWLTGNFNLI 181
           L+PRPHSVSILEFGAVGDGKTLNTIAFQNAIFYL SFADKGGAQLYVPPGKWLTG+FNL 
Sbjct: 32  LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 91

Query: 182 SHLTLFLEKGAVILGSQ 232
           SHLTLFLE+GAVILGSQ
Sbjct: 92  SHLTLFLERGAVILGSQ 108


>ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
          Length = 457

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/77 (93%), Positives = 75/77 (97%)
 Frame = +2

Query: 2   LEPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLNSFADKGGAQLYVPPGKWLTGNFNLI 181
           L+PRPHSVSILEFGAVGDGKTLNTIAFQNAIFYL SFADKGGAQLYVPPGKWLTG+FNL 
Sbjct: 34  LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 93

Query: 182 SHLTLFLEKGAVILGSQ 232
           SHLTLFLE+GAVILGSQ
Sbjct: 94  SHLTLFLERGAVILGSQ 110


>ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 579

 Score =  149 bits (376), Expect = 2e-34
 Identities = 71/77 (92%), Positives = 75/77 (97%)
 Frame = +2

Query: 2   LEPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLNSFADKGGAQLYVPPGKWLTGNFNLI 181
           L+PRPHSVSILEFGAVGDGKTLNTIAFQNAIFYL SFADKGGAQLYVPPGKWLTG+FNL 
Sbjct: 157 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 216

Query: 182 SHLTLFLEKGAVILGSQ 232
           SHLTLFLEKGAVI+G+Q
Sbjct: 217 SHLTLFLEKGAVIIGTQ 233


>ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
          Length = 457

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/77 (93%), Positives = 74/77 (96%)
 Frame = +2

Query: 2   LEPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLNSFADKGGAQLYVPPGKWLTGNFNLI 181
           L+PRPHSVSILEFGAVGDGKTLNTIAFQNAIFYL SFADKGGAQLYVPPGKWLTG+ NL 
Sbjct: 35  LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLT 94

Query: 182 SHLTLFLEKGAVILGSQ 232
           SHLTLFLEKGAVILGSQ
Sbjct: 95  SHLTLFLEKGAVILGSQ 111


>ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 452

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/77 (90%), Positives = 75/77 (97%)
 Frame = +2

Query: 2   LEPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLNSFADKGGAQLYVPPGKWLTGNFNLI 181
           L+PRPHSVSILEFGAVGDGKTLNTIAFQNAIFYL SFADKGGAQLYVPPGKWLTG+FNL 
Sbjct: 30  LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 89

Query: 182 SHLTLFLEKGAVILGSQ 232
           SHLTLFLEKGAV++G+Q
Sbjct: 90  SHLTLFLEKGAVLIGTQ 106


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