BLASTX nr result
ID: Coptis24_contig00018712
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018712 (1533 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g... 606 e-171 ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355... 603 e-170 ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc... 600 e-169 ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g... 590 e-166 ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi... 586 e-165 >ref|XP_002327176.1| f-box family protein [Populus trichocarpa] gi|222835491|gb|EEE73926.1| f-box family protein [Populus trichocarpa] Length = 534 Score = 606 bits (1562), Expect = e-171 Identities = 303/426 (71%), Positives = 350/426 (82%), Gaps = 7/426 (1%) Frame = +2 Query: 275 MGQSTSTPGIRSASKRSSIMNHQMMIKSMAVIAP---EENFTLV---NRDIISDLPDELL 436 MGQS ST I S + +H+ K I P EE + D ISDLPDE L Sbjct: 1 MGQSASTALITSRRDSNRSSSHRSKSKFTVPIMPVQVEEQTEFIFCEGPDYISDLPDECL 60 Query: 437 ANIFHYLNSSDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSKLAL 616 A IF LNS DR CSLVCRRW IEGQSR RLSL+A+SDL+ + +LFSRFDSV+KLAL Sbjct: 61 ACIFQSLNSGDRKHCSLVCRRWLRIEGQSRHRLSLNAQSDLLPLVPFLFSRFDSVTKLAL 120 Query: 617 KCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSCTF 796 KCDRRS SIGDEAL IS RCRNLTRLKLR+CRELTDAGM AFAKNCK LKKLSCGSCTF Sbjct: 121 KCDRRSTSIGDEALVAISSRCRNLTRLKLRSCRELTDAGMAAFAKNCKALKKLSCGSCTF 180 Query: 797 GVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGVAALSLKVICLKELYNGQCFGP 976 G +GMNAILD+C+ LEELS+KRLRG+TDG+ AEP+GPG+AA SLK ICLKELYNGQCFGP Sbjct: 181 GARGMNAILDNCASLEELSLKRLRGITDGAAAEPVGPGLAAASLKTICLKELYNGQCFGP 240 Query: 977 LIAGAKNLRSLKLFRCSGDWDVLLESISGRVRGLVEVHLERLQVSDRGLEAISSCLDLEI 1156 LI G+KNL++LKLFRCSGDWD LL+ IS RV G+VE+HLERLQVSD GL AIS+CL+LEI Sbjct: 241 LIIGSKNLKTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDTGLAAISNCLNLEI 300 Query: 1157 LHLVKTPECTNAGIVSIADRCKVLRKVHIDGWKTNRIGDEGFIAIARQCPKLQELVLIGV 1336 LHLVKTPECT+ G+VSIA+RC++LRK+H+DGWKTNRIGD+G A+A+ CP LQELVLIGV Sbjct: 301 LHLVKTPECTDTGLVSIAERCRLLRKLHVDGWKTNRIGDDGLSAVAKYCPNLQELVLIGV 360 Query: 1337 SPTKLSLGLL-GNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAMEA 1513 +PTK+S+ LL NC+NLERLALC S+T+GD+EISCIAAKCVALKKLCIK CP+++H MEA Sbjct: 361 NPTKISVELLASNCQNLERLALCGSDTVGDAEISCIAAKCVALKKLCIKSCPVSDHGMEA 420 Query: 1514 LVAGCP 1531 L GCP Sbjct: 421 LANGCP 426 >ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1| skip-2, putative [Ricinus communis] Length = 536 Score = 603 bits (1555), Expect = e-170 Identities = 303/431 (70%), Positives = 359/431 (83%), Gaps = 12/431 (2%) Frame = +2 Query: 275 MGQSTSTPGIRSASKRSSIMNHQMMIKSMAVIAP---------EENFTLVNR--DIISDL 421 MGQS+S+ I ++R SI ++ KS A+I+P ++ ++N D ISDL Sbjct: 1 MGQSSSSTAI--LTRRESI--YRSKSKSTALISPMQTEEPNDKDDVVLIINESPDYISDL 56 Query: 422 PDELLANIFHYLNSSDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSV 601 PDE LA IF L+ SDR +CSLVCRRW IEGQSR RLSL A+SDL+ I LF+RFD+V Sbjct: 57 PDECLACIFQSLSPSDRQRCSLVCRRWLRIEGQSRHRLSLHAQSDLLPVISALFTRFDAV 116 Query: 602 SKLALKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSC 781 +KLAL+CDR+S SIGDEAL ISLRCRNLTRLKLR+CR++TDAGM AFAKNCKGLKKLSC Sbjct: 117 TKLALRCDRKSASIGDEALEAISLRCRNLTRLKLRSCRDVTDAGMAAFAKNCKGLKKLSC 176 Query: 782 GSCTFGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGVAALSLKVICLKELYNG 961 GSCTFG KGMNA+LD+C+ LEELS+KRLRG+TDG+ AEPIGPG+AA SLK ICLKELYNG Sbjct: 177 GSCTFGAKGMNAVLDNCASLEELSIKRLRGITDGAAAEPIGPGLAANSLKTICLKELYNG 236 Query: 962 QCFGPLIAGAKNLRSLKLFRCSGDWDVLLESISGRVRGLVEVHLERLQVSDRGLEAISSC 1141 QCFGPLI G+KNLR+LKLFRCSGDWD LL+ IS RV G+VE+HLERLQVSD GL AIS+C Sbjct: 237 QCFGPLIIGSKNLRTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDVGLSAISNC 296 Query: 1142 LDLEILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWKTNRIGDEGFIAIARQCPKLQEL 1321 LDLEILHLVKTPECTN G+ SIA+RCK+LRK+HIDGWK NRIGD+G IA+A+ CP LQEL Sbjct: 297 LDLEILHLVKTPECTNLGLGSIAERCKLLRKLHIDGWKANRIGDDGLIAVAKNCPNLQEL 356 Query: 1322 VLIGVSPTKLSLGLL-GNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITN 1498 VLIGV+PTK SL +L NC+NLERLALC S+T+GD+EISCIAAKC++LKKLCIK CP+++ Sbjct: 357 VLIGVNPTKSSLEMLASNCQNLERLALCGSDTVGDAEISCIAAKCISLKKLCIKSCPVSD 416 Query: 1499 HAMEALVAGCP 1531 H MEAL +GCP Sbjct: 417 HGMEALASGCP 427 >ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus] gi|449515093|ref|XP_004164584.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus] Length = 535 Score = 600 bits (1547), Expect = e-169 Identities = 306/428 (71%), Positives = 352/428 (82%), Gaps = 9/428 (2%) Frame = +2 Query: 275 MGQSTSTPGIRSASKRSSIMNHQMMIKSMAVIAP------EENFTLVN--RDIISDLPDE 430 MGQS S+ I S+R S +H+ IKS A+I+P ++ +++ D ISDLPDE Sbjct: 1 MGQSASSAAI--LSRRDSNHSHRSKIKSTALISPMHLDETDDVQEIIHGASDFISDLPDE 58 Query: 431 LLANIFHYLNSSDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSKL 610 LA IF L+S DR CSLVCRRWF +EGQSR RLSL A +DL + I LF+RFD+V+KL Sbjct: 59 CLACIFQSLSSVDRKGCSLVCRRWFKVEGQSRHRLSLKAEADLSSMIPSLFTRFDAVTKL 118 Query: 611 ALKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSC 790 ALKCDRRS SI D++L LISLRCRNLTRLKLRACRELTD GM AFAKNCKGLKKLSCGSC Sbjct: 119 ALKCDRRSTSIRDDSLILISLRCRNLTRLKLRACRELTDVGMAAFAKNCKGLKKLSCGSC 178 Query: 791 TFGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGVAALSLKVICLKELYNGQCF 970 TFG KGMNA+LD+CS LEELSVKRLRG+TD S AEPIGPG+A SLK ICLK+LYN QCF Sbjct: 179 TFGAKGMNAVLDNCSALEELSVKRLRGITD-STAEPIGPGIAGSSLKTICLKDLYNAQCF 237 Query: 971 GPLIAGAKNLRSLKLFRCSGDWDVLLESISGRVRGLVEVHLERLQVSDRGLEAISSCLDL 1150 GPL+ GAK+LR+LKLFRCSGDWD LL I+ RV GLVEVHLERLQVSD GL AIS+CLDL Sbjct: 238 GPLLIGAKSLRTLKLFRCSGDWDALLRVIADRVTGLVEVHLERLQVSDVGLSAISNCLDL 297 Query: 1151 EILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWKTNRIGDEGFIAIARQCPKLQELVLI 1330 EILHLVKTPECTN GIV++A+RCK+LRK+HIDGWK NRIGDEG +A+AR C LQELVLI Sbjct: 298 EILHLVKTPECTNLGIVALAERCKLLRKLHIDGWKANRIGDEGLVAVARNCSNLQELVLI 357 Query: 1331 GVSPTKLSLGLL-GNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAM 1507 GV+PTK+SL +L NCRNLERLALC S+T+GDSEISCIAAKC+ALKKLCIK CP+++ M Sbjct: 358 GVNPTKVSLEILASNCRNLERLALCGSDTVGDSEISCIAAKCIALKKLCIKSCPVSDQGM 417 Query: 1508 EALVAGCP 1531 EAL GCP Sbjct: 418 EALAEGCP 425 >ref|XP_002301165.1| f-box family protein [Populus trichocarpa] gi|222842891|gb|EEE80438.1| f-box family protein [Populus trichocarpa] Length = 533 Score = 590 bits (1521), Expect = e-166 Identities = 297/427 (69%), Positives = 350/427 (81%), Gaps = 8/427 (1%) Frame = +2 Query: 275 MGQSTSTPGIRSASKRSSIMNHQMMIKSMAV------IAPEENFTLVNR-DIISDLPDEL 433 MGQ+TST I S+R S ++ Q V + + + LV D ISDLPDE Sbjct: 1 MGQTTSTALI--TSRRDSNLSSQRSKSKFTVPIIPMQVEEQTEYVLVEAPDYISDLPDEC 58 Query: 434 LANIFHYLNSSDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSKLA 613 LA IF L+S DR CSLVCRRW IEGQSR RLSL+A+SDL+ + LFSRFD+V+KLA Sbjct: 59 LACIFQSLSSGDRKSCSLVCRRWLRIEGQSRHRLSLNAQSDLLPFVTSLFSRFDAVTKLA 118 Query: 614 LKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSCT 793 LKCDRRSVSIGDEAL IS+RCRNLTRLKLRACRE+TDAGM AFAKNCK LKK SCGSC Sbjct: 119 LKCDRRSVSIGDEALVAISIRCRNLTRLKLRACREITDAGMAAFAKNCKALKKFSCGSCA 178 Query: 794 FGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGVAALSLKVICLKELYNGQCFG 973 FG KGMNA+LD+C+ LE+LSVKRLRG+TDG+ AEPIGPG+AA SLK ICLKELYNGQCFG Sbjct: 179 FGAKGMNAMLDNCASLEDLSVKRLRGITDGATAEPIGPGLAAASLKTICLKELYNGQCFG 238 Query: 974 PLIAGAKNLRSLKLFRCSGDWDVLLESISGRVRGLVEVHLERLQVSDRGLEAISSCLDLE 1153 PLI G+KNL++LKLFRCSGDWD LL+ I+ RV G+VE+HLERLQVSD GL AIS+CL+LE Sbjct: 239 PLIIGSKNLKTLKLFRCSGDWDKLLQVIADRVTGMVEIHLERLQVSDTGLVAISNCLNLE 298 Query: 1154 ILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWKTNRIGDEGFIAIARQCPKLQELVLIG 1333 ILHLVKTPECT+ G+VSIA+RC++LRK+HIDGWK +RIGD+G +A+A+ C LQELVLIG Sbjct: 299 ILHLVKTPECTDIGLVSIAERCRLLRKLHIDGWKAHRIGDDGLMAVAKYCLNLQELVLIG 358 Query: 1334 VSPTKLSLGLL-GNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAME 1510 V+PT++SL LL NC+NLERLALC S+T+GD EISCIAAKCVALKKLCIK CP+++H +E Sbjct: 359 VNPTQISLELLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGLE 418 Query: 1511 ALVAGCP 1531 AL GCP Sbjct: 419 ALANGCP 425 >ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera] Length = 541 Score = 586 bits (1511), Expect = e-165 Identities = 304/428 (71%), Positives = 348/428 (81%), Gaps = 9/428 (2%) Frame = +2 Query: 275 MGQSTSTPGIRS-ASKRSSIMNHQMMIKSMAVIAP---EEN--FTLVNRDI--ISDLPDE 430 MGQS ST I S +S+R S H+ KSM I EEN F ++ D+ ISDLPDE Sbjct: 1 MGQSASTSAISSGSSRRGSNHPHRSRSKSMVQIPSMQVEENVQFRQIDEDLDYISDLPDE 60 Query: 431 LLANIFHYLNSSDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSKL 610 LA IF L S DR +CSLVCRRW IEGQ+R RLSL+A SDL+T + LFSRFD+V+KL Sbjct: 61 CLACIFQSLGSGDRKQCSLVCRRWLRIEGQTRHRLSLNAHSDLLTVVPSLFSRFDAVTKL 120 Query: 611 ALKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSC 790 ALKCDRRSVSIGD+AL LISL CRNLTRLKLRACRELTDAGM FAKNCKGLKKLSCGSC Sbjct: 121 ALKCDRRSVSIGDDALILISLGCRNLTRLKLRACRELTDAGMGVFAKNCKGLKKLSCGSC 180 Query: 791 TFGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGVAALSLKVICLKELYNGQCF 970 TFG KGM+A+LD+CS LEELSVKRLRG++DGS + IGPGVAA SLK ICLKE YNGQCF Sbjct: 181 TFGAKGMSAVLDNCSALEELSVKRLRGISDGSAVDQIGPGVAASSLKTICLKEQYNGQCF 240 Query: 971 GPLIAGAKNLRSLKLFRCSGDWDVLLESISGRVRGLVEVHLERLQVSDRGLEAISSCLDL 1150 PLI GAKNLR+LKLFRCSGD D LL+ ++ R +VE+HLERLQVSD GL AIS LDL Sbjct: 241 WPLIIGAKNLRTLKLFRCSGDCDNLLQLVANRTTSMVEIHLERLQVSDLGLVAISHFLDL 300 Query: 1151 EILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWKTNRIGDEGFIAIARQCPKLQELVLI 1330 EILHLVKT ECTNAG+VS+A+RCK+LRK+HIDGWK NRIGDEG A+A+ CP LQELVLI Sbjct: 301 EILHLVKTSECTNAGLVSVAERCKLLRKLHIDGWKANRIGDEGLSAVAKCCPNLQELVLI 360 Query: 1331 GVSPTKLSLGLL-GNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAM 1507 GV+PTKLSL +L NC+NLERLALC+S+T+GD+EISCIAAKC+ALKKLCIK CP+++ M Sbjct: 361 GVNPTKLSLEMLAANCQNLERLALCASDTVGDAEISCIAAKCLALKKLCIKSCPVSDQGM 420 Query: 1508 EALVAGCP 1531 AL GCP Sbjct: 421 RALACGCP 428