BLASTX nr result
ID: Coptis24_contig00018705
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00018705
(1646 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN78018.1| hypothetical protein VITISV_002923 [Vitis vinifera] 417 0.0
ref|XP_002271199.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe... 417 0.0
ref|XP_003524757.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe... 387 0.0
ref|XP_003531054.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe... 388 0.0
ref|XP_002298196.1| predicted protein [Populus trichocarpa] gi|1... 397 0.0
>emb|CAN78018.1| hypothetical protein VITISV_002923 [Vitis vinifera]
Length = 477
Score = 417 bits (1073), Expect(2) = 0.0
Identities = 201/242 (83%), Positives = 220/242 (90%)
Frame = -3
Query: 1644 CVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSEDIAK 1465
CVF+HRLLDYR+ EVE+LA LFG EDG + L WKLP+ HHPDSPFH V LPSED+A+
Sbjct: 5 CVFYHRLLDYRKAEVESLAHLFGVLEDG---SALQWKLPQHHHPDSPFHFVYLPSEDVAR 61
Query: 1464 SIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKAISF 1285
+IANRSILVKGIYELWGEGSSYEELEEAI++YP+ERKLPYLA+ +TF+I VDSFGK ISF
Sbjct: 62 NIANRSILVKGIYELWGEGSSYEELEEAIRSYPDERKLPYLAAESTFKITVDSFGKVISF 121
Query: 1284 QEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREVGAAD 1105
QEQN+RI G YIPFKGRVNLKNPEHKFWLIETD+YGSNNGLPPVVQ+RIFFGREVGAAD
Sbjct: 122 QEQNDRIQGLTYIPFKGRVNLKNPEHKFWLIETDDYGSNNGLPPVVQKRIFFGREVGAAD 181
Query: 1104 RKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHYGAM 925
RKLLPTY+LKSR YLGPTAMDAEMAFLMANQAL T GKLVYDPFVGTGSILV AAH+GAM
Sbjct: 182 RKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSILVAAAHFGAM 241
Query: 924 TM 919
TM
Sbjct: 242 TM 243
Score = 362 bits (929), Expect(2) = 0.0
Identities = 172/232 (74%), Positives = 192/232 (82%), Gaps = 1/232 (0%)
Frame = -2
Query: 919 DIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYX 740
DIDIRVVRDGRGP+CNVWSNF+QY LPMP+SLLRADNNLPPWRPGLKEVFDAIICDPPY
Sbjct: 246 DIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLLRADNNLPPWRPGLKEVFDAIICDPPYG 305
Query: 739 XXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMGGR 560
G + PYTVPDDKR DHIPSTA YSLAEC+HDL ++AA+MLVMGGR
Sbjct: 306 VRAGGRKSGGRKLLKGVIGPYTVPDDKRTDHIPSTAAYSLAECVHDLLDVAAKMLVMGGR 365
Query: 559 LVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEAAV 380
LV+FYPVLRED ST+THFPEHPCF L+A CEQILS RYSR+LLTMVK GPY+E+IAE A
Sbjct: 366 LVYFYPVLREDDSTETHFPEHPCFKLIATCEQILSLRYSRVLLTMVKIGPYTEEIAETAR 425
Query: 379 KMHLDFRENHLKWLEDGKLHSAVFSPNDSQTASA-ESKLNKDSKPKYRGKYV 227
HL+F+ENHLKWLE+G LH+AVFS D Q A +SK +KDSKPKYRGKYV
Sbjct: 426 LKHLEFKENHLKWLEEGNLHAAVFSSADPQLGDAGDSKSSKDSKPKYRGKYV 477
>ref|XP_002271199.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog [Vitis
vinifera]
Length = 477
Score = 417 bits (1073), Expect(2) = 0.0
Identities = 201/242 (83%), Positives = 220/242 (90%)
Frame = -3
Query: 1644 CVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSEDIAK 1465
CVF+HRLLDYR+ EVE+LA LFG EDG + L WKLP+ HHPDSPFH V LPSED+A+
Sbjct: 5 CVFYHRLLDYRKAEVESLAHLFGVLEDG---SALQWKLPQHHHPDSPFHFVYLPSEDVAR 61
Query: 1464 SIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKAISF 1285
+IANRSILVKGIYELWGEGSSYEELEEAI++YP+ERKLPYLA+ +TF+I VDSFGK ISF
Sbjct: 62 NIANRSILVKGIYELWGEGSSYEELEEAIRSYPDERKLPYLAAESTFKITVDSFGKVISF 121
Query: 1284 QEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREVGAAD 1105
QEQN+RI G YIPFKGRVNLKNPEHKFWLIETD+YGSNNGLPPVVQ+RIFFGREVGAAD
Sbjct: 122 QEQNDRIQGLTYIPFKGRVNLKNPEHKFWLIETDDYGSNNGLPPVVQKRIFFGREVGAAD 181
Query: 1104 RKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHYGAM 925
RKLLPTY+LKSR YLGPTAMDAEMAFLMANQAL T GKLVYDPFVGTGSILV AAH+GAM
Sbjct: 182 RKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSILVAAAHFGAM 241
Query: 924 TM 919
TM
Sbjct: 242 TM 243
Score = 359 bits (922), Expect(2) = 0.0
Identities = 171/232 (73%), Positives = 191/232 (82%), Gaps = 1/232 (0%)
Frame = -2
Query: 919 DIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYX 740
DIDIRVVRDGRGP+CNVWSNF+QY LPMP+SLLRADNNL PWRPGLKEVFDAIICDPPY
Sbjct: 246 DIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLLRADNNLTPWRPGLKEVFDAIICDPPYG 305
Query: 739 XXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMGGR 560
G + PYTVPDDKR DHIPSTA YSLAEC+HDL ++AA+MLVMGGR
Sbjct: 306 VRAGGRKSGGRKLLKGVISPYTVPDDKRTDHIPSTAAYSLAECVHDLLDVAAKMLVMGGR 365
Query: 559 LVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEAAV 380
LV+FYPVLRED ST+THFPEHPCF L+A CEQILS RYSR+LLTMVK GPY+E+IAE A
Sbjct: 366 LVYFYPVLREDDSTETHFPEHPCFKLIATCEQILSLRYSRVLLTMVKIGPYTEEIAETAR 425
Query: 379 KMHLDFRENHLKWLEDGKLHSAVFSPNDSQTASA-ESKLNKDSKPKYRGKYV 227
HL+F+ENHLKWLE+G LH+AVFS D Q A +SK +KDSKPKYRGKYV
Sbjct: 426 LKHLEFKENHLKWLEEGNLHAAVFSSADPQLGDAGDSKSSKDSKPKYRGKYV 477
>ref|XP_003524757.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog
[Glycine max]
Length = 483
Score = 387 bits (995), Expect(2) = 0.0
Identities = 185/245 (75%), Positives = 210/245 (85%), Gaps = 3/245 (1%)
Frame = -3
Query: 1644 CVFFHRLLDYRRPEVEALAQLFGAFED---GDDKNTLDWKLPELHHPDSPFHLVNLPSED 1474
CVFFHRLLDYR+PEVE+LAQLFGA ED GD + + WKLP +HPDSPFH VNLPSE
Sbjct: 5 CVFFHRLLDYRKPEVESLAQLFGATEDPKNGDVPSQMQWKLPIHYHPDSPFHFVNLPSEK 64
Query: 1473 IAKSIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKA 1294
+A+ IA RSILVKG+YELWGEGSSYEEL+E++ +YP+ERKLPYL S +TF+I VDSFGK
Sbjct: 65 LARDIATRSILVKGMYELWGEGSSYEELKESVLSYPDERKLPYLDSDSTFKITVDSFGKV 124
Query: 1293 ISFQEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREVG 1114
IS ++Q E I G YIPFKGRV LKNP+H FWLIE D YG NNGLPP+VQ+R+FFGREVG
Sbjct: 125 ISLEDQKELIQGLSYIPFKGRVKLKNPDHNFWLIEVDNYGGNNGLPPIVQKRVFFGREVG 184
Query: 1113 AADRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHY 934
ADRKLLPTY+LKSR YLGPTAMDAE+AFLMANQAL T GKLVYDPFVGTGSILV AAH+
Sbjct: 185 GADRKLLPTYQLKSRTYLGPTAMDAEIAFLMANQALATSGKLVYDPFVGTGSILVAAAHF 244
Query: 933 GAMTM 919
GA+TM
Sbjct: 245 GAITM 249
Score = 354 bits (909), Expect(2) = 0.0
Identities = 168/232 (72%), Positives = 190/232 (81%), Gaps = 1/232 (0%)
Frame = -2
Query: 919 DIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYX 740
DIDIRVVRDGRGP CNVWSNF+QYGLPMPV LLRADNNLPPWR LKEVFDAIICDPPY
Sbjct: 252 DIDIRVVRDGRGPNCNVWSNFKQYGLPMPVGLLRADNNLPPWRSTLKEVFDAIICDPPYG 311
Query: 739 XXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMGGR 560
G V+PYT+PD+KR +HIPSTA YSL EC+HDLF+LAA+ML+MGGR
Sbjct: 312 VRAGGRKSGGRKLLKGAVEPYTIPDEKRTNHIPSTAAYSLVECVHDLFDLAAKMLLMGGR 371
Query: 559 LVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEAAV 380
LVFFYPVLREDG + HFPEHPCF L+++ EQILS RYSR+LLTMVK GPY+E+IAEAA
Sbjct: 372 LVFFYPVLREDGFPENHFPEHPCFKLISSSEQILSSRYSRVLLTMVKTGPYTEEIAEAAR 431
Query: 379 KMHLDFRENHLKWLEDGKLHSAVFSPNDSQ-TASAESKLNKDSKPKYRGKYV 227
K H++F+ENH+KWLEDG LHSAVFSP D Q T + + KL KD KPKYRGKYV
Sbjct: 432 KKHIEFKENHVKWLEDGNLHSAVFSPADDQFTEAGDPKLIKDPKPKYRGKYV 483
>ref|XP_003531054.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog
[Glycine max]
Length = 483
Score = 388 bits (997), Expect(2) = 0.0
Identities = 186/245 (75%), Positives = 209/245 (85%), Gaps = 3/245 (1%)
Frame = -3
Query: 1644 CVFFHRLLDYRRPEVEALAQLFGAFED---GDDKNTLDWKLPELHHPDSPFHLVNLPSED 1474
CVFFHRLLDYR+PEVE+LAQLFGA ED GD + L WKLP +H DSPFH VNLPSE
Sbjct: 5 CVFFHRLLDYRKPEVESLAQLFGATEDPQNGDVSSQLQWKLPHHYHADSPFHFVNLPSEQ 64
Query: 1473 IAKSIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKA 1294
+A++IA RSILVKG+YELWGEGSSYEEL+E++ +YP+ERKLPYL S +TF+I VD FGK
Sbjct: 65 LARNIATRSILVKGMYELWGEGSSYEELKESVLSYPDERKLPYLDSDSTFKITVDCFGKV 124
Query: 1293 ISFQEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREVG 1114
IS +EQ E I G YIPFKGRV LKNP+H FWLIE D YG NNGLPP+VQ+R+FFGREVG
Sbjct: 125 ISLEEQKELIQGLSYIPFKGRVKLKNPDHNFWLIEVDNYGGNNGLPPIVQKRVFFGREVG 184
Query: 1113 AADRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHY 934
ADRKLLPTY+LKSR YLGPTAMDAE+AFLMANQAL T GKLVYDPFVGTGSILV AAH+
Sbjct: 185 GADRKLLPTYQLKSRTYLGPTAMDAEIAFLMANQALATSGKLVYDPFVGTGSILVAAAHF 244
Query: 933 GAMTM 919
GAMTM
Sbjct: 245 GAMTM 249
Score = 352 bits (902), Expect(2) = 0.0
Identities = 167/232 (71%), Positives = 190/232 (81%), Gaps = 1/232 (0%)
Frame = -2
Query: 919 DIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYX 740
DIDIRVVRDGRGP CNVWSNF+QYGLPMPV LLRADNNLPPWR LKEVFDAIICDPPY
Sbjct: 252 DIDIRVVRDGRGPNCNVWSNFKQYGLPMPVGLLRADNNLPPWRSTLKEVFDAIICDPPYG 311
Query: 739 XXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMGGR 560
G V+PYTVPD+KR +HIPSTA YSL EC+HDL +LAA+MLVMGGR
Sbjct: 312 VRAGGRKSGGRKLLKGAVEPYTVPDEKRTNHIPSTAAYSLVECVHDLLDLAAKMLVMGGR 371
Query: 559 LVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEAAV 380
LV+FYPVLREDG + HFPEHPCF L+++ EQILS RYSR+LLTMVK GPY+E+IAEAA
Sbjct: 372 LVYFYPVLREDGFAENHFPEHPCFKLISSSEQILSSRYSRVLLTMVKTGPYTEEIAEAAR 431
Query: 379 KMHLDFRENHLKWLEDGKLHSAVFSPNDSQ-TASAESKLNKDSKPKYRGKYV 227
+ H++F+ENH+KWLEDG LHSAVFSP D+Q T + + KL KD KPKYRGKYV
Sbjct: 432 EKHIEFKENHVKWLEDGNLHSAVFSPADAQLTEAGDPKLIKDPKPKYRGKYV 483
>ref|XP_002298196.1| predicted protein [Populus trichocarpa] gi|118486632|gb|ABK95153.1|
unknown [Populus trichocarpa] gi|222845454|gb|EEE83001.1|
predicted protein [Populus trichocarpa]
Length = 474
Score = 397 bits (1021), Expect(2) = 0.0
Identities = 192/242 (79%), Positives = 216/242 (89%)
Frame = -3
Query: 1644 CVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSEDIAK 1465
CVF+HRLL YRR EVE+LA++FG F ++L+W+LPE HPDSPFHLVNLPSEDIA+
Sbjct: 5 CVFYHRLLSYRRAEVESLAEMFGVF------SSLEWRLPENQHPDSPFHLVNLPSEDIAR 58
Query: 1464 SIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKAISF 1285
+IANRSILVKGIYELWGEGSS+E+LEEAIK+YPE+RKLPYL TTF++ VDSFGKAISF
Sbjct: 59 NIANRSILVKGIYELWGEGSSFEQLEEAIKSYPEDRKLPYLTCETTFKVTVDSFGKAISF 118
Query: 1284 QEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREVGAAD 1105
QEQN+RI YIPFKGRVNLKNP+ FWLIETD+YG+ NGLPPVVQ+RIFFGR VG AD
Sbjct: 119 QEQNDRIKSLAYIPFKGRVNLKNPDINFWLIETDDYGAPNGLPPVVQKRIFFGRLVGGAD 178
Query: 1104 RKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHYGAM 925
RKLLPTY+LKSR+YLGPTAMDAEMAFLMANQALV PGKLVYDPFVGTGSILV AAH+GAM
Sbjct: 179 RKLLPTYQLKSRRYLGPTAMDAEMAFLMANQALVMPGKLVYDPFVGTGSILVAAAHFGAM 238
Query: 924 TM 919
TM
Sbjct: 239 TM 240
Score = 333 bits (854), Expect(2) = 0.0
Identities = 159/232 (68%), Positives = 182/232 (78%), Gaps = 1/232 (0%)
Frame = -2
Query: 919 DIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYX 740
DIDIR VRDGRGP+CNVWSNF+QYGLP+PV+LLRADNNLPPWR GLKE+FDAIICDPPY
Sbjct: 243 DIDIRAVRDGRGPDCNVWSNFKQYGLPLPVALLRADNNLPPWRSGLKEIFDAIICDPPYG 302
Query: 739 XXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMGGR 560
G V PYTVPDDKR DHIPSTAPYSLAEC+HDL +LAARMLVMGGR
Sbjct: 303 VRAGGRKSGGRKLLKGIVGPYTVPDDKRTDHIPSTAPYSLAECVHDLLDLAARMLVMGGR 362
Query: 559 LVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEAAV 380
LV+FYPVLRED + HFPEHPCF L+A+ EQILS RYSR+L+TMVK G Y++ +AEAA
Sbjct: 363 LVYFYPVLREDDVMENHFPEHPCFKLIASSEQILSSRYSRVLVTMVKTGSYTDKVAEAAK 422
Query: 379 KMHLDFRENHLKWLEDGKLHSAVFSPNDSQTA-SAESKLNKDSKPKYRGKYV 227
H +F+EN++KWLE G LHS+VF P +SKL K+ KPKYRGKYV
Sbjct: 423 IKHQEFKENYVKWLEHGNLHSSVFGPAHLHLGEETDSKLCKELKPKYRGKYV 474