BLASTX nr result

ID: Coptis24_contig00018705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018705
         (1646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78018.1| hypothetical protein VITISV_002923 [Vitis vinifera]   417   0.0  
ref|XP_002271199.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   417   0.0  
ref|XP_003524757.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   387   0.0  
ref|XP_003531054.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   388   0.0  
ref|XP_002298196.1| predicted protein [Populus trichocarpa] gi|1...   397   0.0  

>emb|CAN78018.1| hypothetical protein VITISV_002923 [Vitis vinifera]
          Length = 477

 Score =  417 bits (1073), Expect(2) = 0.0
 Identities = 201/242 (83%), Positives = 220/242 (90%)
 Frame = -3

Query: 1644 CVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSEDIAK 1465
            CVF+HRLLDYR+ EVE+LA LFG  EDG   + L WKLP+ HHPDSPFH V LPSED+A+
Sbjct: 5    CVFYHRLLDYRKAEVESLAHLFGVLEDG---SALQWKLPQHHHPDSPFHFVYLPSEDVAR 61

Query: 1464 SIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKAISF 1285
            +IANRSILVKGIYELWGEGSSYEELEEAI++YP+ERKLPYLA+ +TF+I VDSFGK ISF
Sbjct: 62   NIANRSILVKGIYELWGEGSSYEELEEAIRSYPDERKLPYLAAESTFKITVDSFGKVISF 121

Query: 1284 QEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREVGAAD 1105
            QEQN+RI G  YIPFKGRVNLKNPEHKFWLIETD+YGSNNGLPPVVQ+RIFFGREVGAAD
Sbjct: 122  QEQNDRIQGLTYIPFKGRVNLKNPEHKFWLIETDDYGSNNGLPPVVQKRIFFGREVGAAD 181

Query: 1104 RKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHYGAM 925
            RKLLPTY+LKSR YLGPTAMDAEMAFLMANQAL T GKLVYDPFVGTGSILV AAH+GAM
Sbjct: 182  RKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSILVAAAHFGAM 241

Query: 924  TM 919
            TM
Sbjct: 242  TM 243



 Score =  362 bits (929), Expect(2) = 0.0
 Identities = 172/232 (74%), Positives = 192/232 (82%), Gaps = 1/232 (0%)
 Frame = -2

Query: 919 DIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYX 740
           DIDIRVVRDGRGP+CNVWSNF+QY LPMP+SLLRADNNLPPWRPGLKEVFDAIICDPPY 
Sbjct: 246 DIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLLRADNNLPPWRPGLKEVFDAIICDPPYG 305

Query: 739 XXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMGGR 560
                          G + PYTVPDDKR DHIPSTA YSLAEC+HDL ++AA+MLVMGGR
Sbjct: 306 VRAGGRKSGGRKLLKGVIGPYTVPDDKRTDHIPSTAAYSLAECVHDLLDVAAKMLVMGGR 365

Query: 559 LVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEAAV 380
           LV+FYPVLRED ST+THFPEHPCF L+A CEQILS RYSR+LLTMVK GPY+E+IAE A 
Sbjct: 366 LVYFYPVLREDDSTETHFPEHPCFKLIATCEQILSLRYSRVLLTMVKIGPYTEEIAETAR 425

Query: 379 KMHLDFRENHLKWLEDGKLHSAVFSPNDSQTASA-ESKLNKDSKPKYRGKYV 227
             HL+F+ENHLKWLE+G LH+AVFS  D Q   A +SK +KDSKPKYRGKYV
Sbjct: 426 LKHLEFKENHLKWLEEGNLHAAVFSSADPQLGDAGDSKSSKDSKPKYRGKYV 477


>ref|XP_002271199.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog [Vitis
            vinifera]
          Length = 477

 Score =  417 bits (1073), Expect(2) = 0.0
 Identities = 201/242 (83%), Positives = 220/242 (90%)
 Frame = -3

Query: 1644 CVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSEDIAK 1465
            CVF+HRLLDYR+ EVE+LA LFG  EDG   + L WKLP+ HHPDSPFH V LPSED+A+
Sbjct: 5    CVFYHRLLDYRKAEVESLAHLFGVLEDG---SALQWKLPQHHHPDSPFHFVYLPSEDVAR 61

Query: 1464 SIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKAISF 1285
            +IANRSILVKGIYELWGEGSSYEELEEAI++YP+ERKLPYLA+ +TF+I VDSFGK ISF
Sbjct: 62   NIANRSILVKGIYELWGEGSSYEELEEAIRSYPDERKLPYLAAESTFKITVDSFGKVISF 121

Query: 1284 QEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREVGAAD 1105
            QEQN+RI G  YIPFKGRVNLKNPEHKFWLIETD+YGSNNGLPPVVQ+RIFFGREVGAAD
Sbjct: 122  QEQNDRIQGLTYIPFKGRVNLKNPEHKFWLIETDDYGSNNGLPPVVQKRIFFGREVGAAD 181

Query: 1104 RKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHYGAM 925
            RKLLPTY+LKSR YLGPTAMDAEMAFLMANQAL T GKLVYDPFVGTGSILV AAH+GAM
Sbjct: 182  RKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSILVAAAHFGAM 241

Query: 924  TM 919
            TM
Sbjct: 242  TM 243



 Score =  359 bits (922), Expect(2) = 0.0
 Identities = 171/232 (73%), Positives = 191/232 (82%), Gaps = 1/232 (0%)
 Frame = -2

Query: 919 DIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYX 740
           DIDIRVVRDGRGP+CNVWSNF+QY LPMP+SLLRADNNL PWRPGLKEVFDAIICDPPY 
Sbjct: 246 DIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLLRADNNLTPWRPGLKEVFDAIICDPPYG 305

Query: 739 XXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMGGR 560
                          G + PYTVPDDKR DHIPSTA YSLAEC+HDL ++AA+MLVMGGR
Sbjct: 306 VRAGGRKSGGRKLLKGVISPYTVPDDKRTDHIPSTAAYSLAECVHDLLDVAAKMLVMGGR 365

Query: 559 LVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEAAV 380
           LV+FYPVLRED ST+THFPEHPCF L+A CEQILS RYSR+LLTMVK GPY+E+IAE A 
Sbjct: 366 LVYFYPVLREDDSTETHFPEHPCFKLIATCEQILSLRYSRVLLTMVKIGPYTEEIAETAR 425

Query: 379 KMHLDFRENHLKWLEDGKLHSAVFSPNDSQTASA-ESKLNKDSKPKYRGKYV 227
             HL+F+ENHLKWLE+G LH+AVFS  D Q   A +SK +KDSKPKYRGKYV
Sbjct: 426 LKHLEFKENHLKWLEEGNLHAAVFSSADPQLGDAGDSKSSKDSKPKYRGKYV 477


>ref|XP_003524757.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog
            [Glycine max]
          Length = 483

 Score =  387 bits (995), Expect(2) = 0.0
 Identities = 185/245 (75%), Positives = 210/245 (85%), Gaps = 3/245 (1%)
 Frame = -3

Query: 1644 CVFFHRLLDYRRPEVEALAQLFGAFED---GDDKNTLDWKLPELHHPDSPFHLVNLPSED 1474
            CVFFHRLLDYR+PEVE+LAQLFGA ED   GD  + + WKLP  +HPDSPFH VNLPSE 
Sbjct: 5    CVFFHRLLDYRKPEVESLAQLFGATEDPKNGDVPSQMQWKLPIHYHPDSPFHFVNLPSEK 64

Query: 1473 IAKSIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKA 1294
            +A+ IA RSILVKG+YELWGEGSSYEEL+E++ +YP+ERKLPYL S +TF+I VDSFGK 
Sbjct: 65   LARDIATRSILVKGMYELWGEGSSYEELKESVLSYPDERKLPYLDSDSTFKITVDSFGKV 124

Query: 1293 ISFQEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREVG 1114
            IS ++Q E I G  YIPFKGRV LKNP+H FWLIE D YG NNGLPP+VQ+R+FFGREVG
Sbjct: 125  ISLEDQKELIQGLSYIPFKGRVKLKNPDHNFWLIEVDNYGGNNGLPPIVQKRVFFGREVG 184

Query: 1113 AADRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHY 934
             ADRKLLPTY+LKSR YLGPTAMDAE+AFLMANQAL T GKLVYDPFVGTGSILV AAH+
Sbjct: 185  GADRKLLPTYQLKSRTYLGPTAMDAEIAFLMANQALATSGKLVYDPFVGTGSILVAAAHF 244

Query: 933  GAMTM 919
            GA+TM
Sbjct: 245  GAITM 249



 Score =  354 bits (909), Expect(2) = 0.0
 Identities = 168/232 (72%), Positives = 190/232 (81%), Gaps = 1/232 (0%)
 Frame = -2

Query: 919 DIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYX 740
           DIDIRVVRDGRGP CNVWSNF+QYGLPMPV LLRADNNLPPWR  LKEVFDAIICDPPY 
Sbjct: 252 DIDIRVVRDGRGPNCNVWSNFKQYGLPMPVGLLRADNNLPPWRSTLKEVFDAIICDPPYG 311

Query: 739 XXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMGGR 560
                          G V+PYT+PD+KR +HIPSTA YSL EC+HDLF+LAA+ML+MGGR
Sbjct: 312 VRAGGRKSGGRKLLKGAVEPYTIPDEKRTNHIPSTAAYSLVECVHDLFDLAAKMLLMGGR 371

Query: 559 LVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEAAV 380
           LVFFYPVLREDG  + HFPEHPCF L+++ EQILS RYSR+LLTMVK GPY+E+IAEAA 
Sbjct: 372 LVFFYPVLREDGFPENHFPEHPCFKLISSSEQILSSRYSRVLLTMVKTGPYTEEIAEAAR 431

Query: 379 KMHLDFRENHLKWLEDGKLHSAVFSPNDSQ-TASAESKLNKDSKPKYRGKYV 227
           K H++F+ENH+KWLEDG LHSAVFSP D Q T + + KL KD KPKYRGKYV
Sbjct: 432 KKHIEFKENHVKWLEDGNLHSAVFSPADDQFTEAGDPKLIKDPKPKYRGKYV 483


>ref|XP_003531054.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog
            [Glycine max]
          Length = 483

 Score =  388 bits (997), Expect(2) = 0.0
 Identities = 186/245 (75%), Positives = 209/245 (85%), Gaps = 3/245 (1%)
 Frame = -3

Query: 1644 CVFFHRLLDYRRPEVEALAQLFGAFED---GDDKNTLDWKLPELHHPDSPFHLVNLPSED 1474
            CVFFHRLLDYR+PEVE+LAQLFGA ED   GD  + L WKLP  +H DSPFH VNLPSE 
Sbjct: 5    CVFFHRLLDYRKPEVESLAQLFGATEDPQNGDVSSQLQWKLPHHYHADSPFHFVNLPSEQ 64

Query: 1473 IAKSIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKA 1294
            +A++IA RSILVKG+YELWGEGSSYEEL+E++ +YP+ERKLPYL S +TF+I VD FGK 
Sbjct: 65   LARNIATRSILVKGMYELWGEGSSYEELKESVLSYPDERKLPYLDSDSTFKITVDCFGKV 124

Query: 1293 ISFQEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREVG 1114
            IS +EQ E I G  YIPFKGRV LKNP+H FWLIE D YG NNGLPP+VQ+R+FFGREVG
Sbjct: 125  ISLEEQKELIQGLSYIPFKGRVKLKNPDHNFWLIEVDNYGGNNGLPPIVQKRVFFGREVG 184

Query: 1113 AADRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHY 934
             ADRKLLPTY+LKSR YLGPTAMDAE+AFLMANQAL T GKLVYDPFVGTGSILV AAH+
Sbjct: 185  GADRKLLPTYQLKSRTYLGPTAMDAEIAFLMANQALATSGKLVYDPFVGTGSILVAAAHF 244

Query: 933  GAMTM 919
            GAMTM
Sbjct: 245  GAMTM 249



 Score =  352 bits (902), Expect(2) = 0.0
 Identities = 167/232 (71%), Positives = 190/232 (81%), Gaps = 1/232 (0%)
 Frame = -2

Query: 919 DIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYX 740
           DIDIRVVRDGRGP CNVWSNF+QYGLPMPV LLRADNNLPPWR  LKEVFDAIICDPPY 
Sbjct: 252 DIDIRVVRDGRGPNCNVWSNFKQYGLPMPVGLLRADNNLPPWRSTLKEVFDAIICDPPYG 311

Query: 739 XXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMGGR 560
                          G V+PYTVPD+KR +HIPSTA YSL EC+HDL +LAA+MLVMGGR
Sbjct: 312 VRAGGRKSGGRKLLKGAVEPYTVPDEKRTNHIPSTAAYSLVECVHDLLDLAAKMLVMGGR 371

Query: 559 LVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEAAV 380
           LV+FYPVLREDG  + HFPEHPCF L+++ EQILS RYSR+LLTMVK GPY+E+IAEAA 
Sbjct: 372 LVYFYPVLREDGFAENHFPEHPCFKLISSSEQILSSRYSRVLLTMVKTGPYTEEIAEAAR 431

Query: 379 KMHLDFRENHLKWLEDGKLHSAVFSPNDSQ-TASAESKLNKDSKPKYRGKYV 227
           + H++F+ENH+KWLEDG LHSAVFSP D+Q T + + KL KD KPKYRGKYV
Sbjct: 432 EKHIEFKENHVKWLEDGNLHSAVFSPADAQLTEAGDPKLIKDPKPKYRGKYV 483


>ref|XP_002298196.1| predicted protein [Populus trichocarpa] gi|118486632|gb|ABK95153.1|
            unknown [Populus trichocarpa] gi|222845454|gb|EEE83001.1|
            predicted protein [Populus trichocarpa]
          Length = 474

 Score =  397 bits (1021), Expect(2) = 0.0
 Identities = 192/242 (79%), Positives = 216/242 (89%)
 Frame = -3

Query: 1644 CVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSEDIAK 1465
            CVF+HRLL YRR EVE+LA++FG F      ++L+W+LPE  HPDSPFHLVNLPSEDIA+
Sbjct: 5    CVFYHRLLSYRRAEVESLAEMFGVF------SSLEWRLPENQHPDSPFHLVNLPSEDIAR 58

Query: 1464 SIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGKAISF 1285
            +IANRSILVKGIYELWGEGSS+E+LEEAIK+YPE+RKLPYL   TTF++ VDSFGKAISF
Sbjct: 59   NIANRSILVKGIYELWGEGSSFEQLEEAIKSYPEDRKLPYLTCETTFKVTVDSFGKAISF 118

Query: 1284 QEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREVGAAD 1105
            QEQN+RI    YIPFKGRVNLKNP+  FWLIETD+YG+ NGLPPVVQ+RIFFGR VG AD
Sbjct: 119  QEQNDRIKSLAYIPFKGRVNLKNPDINFWLIETDDYGAPNGLPPVVQKRIFFGRLVGGAD 178

Query: 1104 RKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAHYGAM 925
            RKLLPTY+LKSR+YLGPTAMDAEMAFLMANQALV PGKLVYDPFVGTGSILV AAH+GAM
Sbjct: 179  RKLLPTYQLKSRRYLGPTAMDAEMAFLMANQALVMPGKLVYDPFVGTGSILVAAAHFGAM 238

Query: 924  TM 919
            TM
Sbjct: 239  TM 240



 Score =  333 bits (854), Expect(2) = 0.0
 Identities = 159/232 (68%), Positives = 182/232 (78%), Gaps = 1/232 (0%)
 Frame = -2

Query: 919 DIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPPYX 740
           DIDIR VRDGRGP+CNVWSNF+QYGLP+PV+LLRADNNLPPWR GLKE+FDAIICDPPY 
Sbjct: 243 DIDIRAVRDGRGPDCNVWSNFKQYGLPLPVALLRADNNLPPWRSGLKEIFDAIICDPPYG 302

Query: 739 XXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMGGR 560
                          G V PYTVPDDKR DHIPSTAPYSLAEC+HDL +LAARMLVMGGR
Sbjct: 303 VRAGGRKSGGRKLLKGIVGPYTVPDDKRTDHIPSTAPYSLAECVHDLLDLAARMLVMGGR 362

Query: 559 LVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEAAV 380
           LV+FYPVLRED   + HFPEHPCF L+A+ EQILS RYSR+L+TMVK G Y++ +AEAA 
Sbjct: 363 LVYFYPVLREDDVMENHFPEHPCFKLIASSEQILSSRYSRVLVTMVKTGSYTDKVAEAAK 422

Query: 379 KMHLDFRENHLKWLEDGKLHSAVFSPNDSQTA-SAESKLNKDSKPKYRGKYV 227
             H +F+EN++KWLE G LHS+VF P         +SKL K+ KPKYRGKYV
Sbjct: 423 IKHQEFKENYVKWLEHGNLHSSVFGPAHLHLGEETDSKLCKELKPKYRGKYV 474


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