BLASTX nr result

ID: Coptis24_contig00018697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018697
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321460.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-23
ref|XP_002273782.1| PREDICTED: uncharacterized protein LOC100256...   102   2e-23
ref|XP_002888953.1| zinc finger family protein [Arabidopsis lyra...   100   7e-23
ref|XP_002511976.1| X-linked inhibitor of apoptosis protein, xia...    97   1e-21
ref|XP_004138227.1| PREDICTED: uncharacterized protein LOC101215...    97   2e-21

>ref|XP_002321460.1| predicted protein [Populus trichocarpa] gi|222868456|gb|EEF05587.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score =  103 bits (256), Expect(2) = 1e-23
 Identities = 49/76 (64%), Positives = 59/76 (77%)
 Frame = -3

Query: 233 LCWNGSSLFSSKMDPNQDGMCVLQNIGGHIMKIPLIVFQDLLCMHLEGTPSSVRQIPIPI 54
           L WNG  + S + + +QD MC LQ+IGGH+MKIPLI FQ LLCMHLEGTP+  R IP+ +
Sbjct: 224 LDWNGGLMVSPEENQHQDRMCGLQDIGGHLMKIPLIGFQVLLCMHLEGTPAGARNIPLLV 283

Query: 53  VFCPLFLLQAAGVLFA 6
           +F PLFLLQ AGVLFA
Sbjct: 284 LFSPLFLLQGAGVLFA 299



 Score = 31.2 bits (69), Expect(2) = 1e-23
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -1

Query: 322 FLVCTKWCNPLIH 284
           FLVCTKW NP+IH
Sbjct: 195 FLVCTKWSNPVIH 207


>ref|XP_002273782.1| PREDICTED: uncharacterized protein LOC100256061 [Vitis vinifera]
           gi|297734166|emb|CBI15413.3| unnamed protein product
           [Vitis vinifera]
          Length = 466

 Score =  102 bits (255), Expect(2) = 2e-23
 Identities = 48/76 (63%), Positives = 59/76 (77%)
 Frame = -3

Query: 233 LCWNGSSLFSSKMDPNQDGMCVLQNIGGHIMKIPLIVFQDLLCMHLEGTPSSVRQIPIPI 54
           L WN   + S+  D +QD MC LQ+IGGHIMK+PLI FQ LLCM LEGTP++ R IPIP+
Sbjct: 225 LDWNSGLVVSTDEDQHQDRMCGLQDIGGHIMKVPLIGFQVLLCMRLEGTPAAARDIPIPV 284

Query: 53  VFCPLFLLQAAGVLFA 6
           +F P+FLLQ AGVLF+
Sbjct: 285 LFSPIFLLQGAGVLFS 300



 Score = 31.2 bits (69), Expect(2) = 2e-23
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -1

Query: 322 FLVCTKWCNPLIH 284
           FLVCTKW NP+IH
Sbjct: 195 FLVCTKWSNPVIH 207


>ref|XP_002888953.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334794|gb|EFH65212.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 467

 Score =  100 bits (250), Expect(2) = 7e-23
 Identities = 48/76 (63%), Positives = 56/76 (73%)
 Frame = -3

Query: 233 LCWNGSSLFSSKMDPNQDGMCVLQNIGGHIMKIPLIVFQDLLCMHLEGTPSSVRQIPIPI 54
           L WN      S+ D NQD  C LQ+ GGHIMKIPLIVFQ +LCMHLEGTP + + IP+P+
Sbjct: 225 LDWNSGLGVFSEDDRNQDTTCGLQDFGGHIMKIPLIVFQVVLCMHLEGTPEAAKYIPVPV 284

Query: 53  VFCPLFLLQAAGVLFA 6
           +F PLFLLQ  GVLFA
Sbjct: 285 LFSPLFLLQGVGVLFA 300



 Score = 31.2 bits (69), Expect(2) = 7e-23
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -1

Query: 322 FLVCTKWCNPLIH 284
           FLVCTKW NP+IH
Sbjct: 195 FLVCTKWSNPVIH 207


>ref|XP_002511976.1| X-linked inhibitor of apoptosis protein, xiap, putative [Ricinus
           communis] gi|223549156|gb|EEF50645.1| X-linked inhibitor
           of apoptosis protein, xiap, putative [Ricinus communis]
          Length = 409

 Score = 97.1 bits (240), Expect(2) = 1e-21
 Identities = 45/76 (59%), Positives = 57/76 (75%)
 Frame = -3

Query: 233 LCWNGSSLFSSKMDPNQDGMCVLQNIGGHIMKIPLIVFQDLLCMHLEGTPSSVRQIPIPI 54
           L WN   + S   + ++D +C LQ+IGGH+MKIPL+ FQ LLCMHLEG+P+  R IP+PI
Sbjct: 167 LDWNSGLVVSPDENQHEDRICGLQDIGGHLMKIPLVGFQVLLCMHLEGSPAGARNIPLPI 226

Query: 53  VFCPLFLLQAAGVLFA 6
           +F PLFLLQ A VLFA
Sbjct: 227 LFSPLFLLQGAAVLFA 242



 Score = 31.2 bits (69), Expect(2) = 1e-21
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -1

Query: 322 FLVCTKWCNPLIH 284
           FLVCTKW NP+IH
Sbjct: 137 FLVCTKWSNPVIH 149


>ref|XP_004138227.1| PREDICTED: uncharacterized protein LOC101215825 [Cucumis sativus]
          Length = 474

 Score = 97.1 bits (240), Expect(2) = 2e-21
 Identities = 42/76 (55%), Positives = 59/76 (77%)
 Frame = -3

Query: 233 LCWNGSSLFSSKMDPNQDGMCVLQNIGGHIMKIPLIVFQDLLCMHLEGTPSSVRQIPIPI 54
           L WN   +   + D +QD +C LQ+IGGHIMKIP+I+FQ LLCM+LEGTP++ + +P+PI
Sbjct: 232 LDWNSGLIVYPEQDQHQDRICGLQDIGGHIMKIPIIIFQILLCMYLEGTPAAAKNMPLPI 291

Query: 53  VFCPLFLLQAAGVLFA 6
           +F PLF+LQ A V++A
Sbjct: 292 LFSPLFMLQGAAVIYA 307



 Score = 30.4 bits (67), Expect(2) = 2e-21
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -1

Query: 322 FLVCTKWCNPLIH 284
           FLVCTKW NP IH
Sbjct: 202 FLVCTKWSNPAIH 214


Top