BLASTX nr result

ID: Coptis24_contig00018692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018692
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266...   149   1e-33
ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775...   146   9e-33
ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779...   146   1e-32
gb|AFK37094.1| unknown [Lotus japonicus]                              135   3e-29
ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago ...   134   4e-29

>ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266552 [Vitis vinifera]
           gi|296085473|emb|CBI29205.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  149 bits (377), Expect = 1e-33
 Identities = 78/165 (47%), Positives = 101/165 (61%), Gaps = 3/165 (1%)
 Frame = +3

Query: 213 MEKHPLRMVXXXXXXXXXXXXASSACIASELKRPKDKDVKFDGKLCHLPQNPAFILGVCA 392
           MEKH    +            A   C+A+E KR K KDVK +GKLC+L ++ AF LGV A
Sbjct: 1   MEKHRFASLLIPSIIAFLGLMAFGLCVAAEFKRSKKKDVKLNGKLCYLAESGAFQLGVAA 60

Query: 393 CVCLLTAQIIGNTVIAMPFCSRGNKIFDWKQRVP---RCLLLLSWISFGTAATLLSVATS 563
            +CL  A I+GN VI    CS G K    K + P     LL++SWISFG A  L+  ATS
Sbjct: 61  LICLFIAHILGNMVICRRICS-GEKSSSGKAKTPWITSTLLVVSWISFGVALILMGTATS 119

Query: 564 MNQMQPYGKGWLDGECYIVRDGVYIVAAALIFTTVMFILGSIMAT 698
           MN+ QPY +GWLDG+CYIV+DGVY+ +A L+  T+   LGS++ T
Sbjct: 120 MNRRQPYRRGWLDGKCYIVKDGVYVGSAVLVMLTIGSTLGSVIMT 164


>ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775915 [Glycine max]
          Length = 191

 Score =  146 bits (369), Expect = 9e-33
 Identities = 70/140 (50%), Positives = 102/140 (72%), Gaps = 3/140 (2%)
 Frame = +3

Query: 288 CIASELKRPKDKDVKFDGKLCHLPQNPAFILGVCACVCLLTAQIIGNTVIAMPFCSRGNK 467
           CIASE KR K  D++++GKLCHLP +PAF LG+ + VCL+ +QI+GN+++   +CS G +
Sbjct: 32  CIASETKRNKKGDLRWNGKLCHLPSSPAFGLGIASLVCLVLSQIVGNSILFKTYCSGGKR 91

Query: 468 IFDWKQRVP---RCLLLLSWISFGTAATLLSVATSMNQMQPYGKGWLDGECYIVRDGVYI 638
             + K  +P   R LLL+SW+SFG A  LL VATSM++ Q YG+GWL+GECY+V+ G+Y+
Sbjct: 92  --NAKCEIPFVARILLLISWLSFGIAVILLIVATSMSRRQAYGEGWLNGECYLVKGGIYV 149

Query: 639 VAAALIFTTVMFILGSIMAT 698
            +A LI  +V  ++GS + T
Sbjct: 150 GSAILILVSVESLMGSALLT 169


>ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779666 [Glycine max]
          Length = 191

 Score =  146 bits (368), Expect = 1e-32
 Identities = 70/138 (50%), Positives = 100/138 (72%), Gaps = 1/138 (0%)
 Frame = +3

Query: 288 CIASELKRPKDKDVKFDGKLCHLPQNPAFILGVCACVCLLTAQIIGNTVIAMPFCSRGNK 467
           CIASE KR K  D++++GKLCHLP +PAF LGV + VCL+ +QI+GN+++   +CS G +
Sbjct: 32  CIASETKRNKKGDLRWNGKLCHLPSSPAFGLGVASLVCLVLSQIVGNSILFRTYCSGGKR 91

Query: 468 IFDWK-QRVPRCLLLLSWISFGTAATLLSVATSMNQMQPYGKGWLDGECYIVRDGVYIVA 644
              ++   V R LLL+SW+SFG A  LL VATSM++ Q YG+GWL+GECY+V+ G+Y+  
Sbjct: 92  NAKFEIPFVARILLLISWLSFGIAVILLIVATSMSRRQAYGEGWLNGECYLVKGGIYVGL 151

Query: 645 AALIFTTVMFILGSIMAT 698
           A LI  +V  ++GS + T
Sbjct: 152 AILIIVSVESLMGSALLT 169


>gb|AFK37094.1| unknown [Lotus japonicus]
          Length = 182

 Score =  135 bits (339), Expect = 3e-29
 Identities = 66/138 (47%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
 Frame = +3

Query: 288 CIASELKRPKDKDVKFDGKLCHLPQNPAFILGVCACVCLLTAQIIGNTVIAMPFCSRGNK 467
           CI SE KR K +D++++GKLC+LP + AF LG+ A V    AQ+I N+++    CS G +
Sbjct: 29  CIVSEFKRNKKEDLRWNGKLCYLPSSQAFGLGIAALVSFFVAQVIVNSILFKNSCSGGKR 88

Query: 468 IFDWK-QRVPRCLLLLSWISFGTAATLLSVATSMNQMQPYGKGWLDGECYIVRDGVYIVA 644
               K   V R LLL+SW+ FG A  LL  ATSMN+ QPYG GWL+GECY+V +G Y  +
Sbjct: 89  NAQHKIPTVARLLLLISWVDFGVAVILLITATSMNRRQPYGLGWLNGECYLVEEGTYAGS 148

Query: 645 AALIFTTVMFILGSIMAT 698
           A LI  T+  ++GS + T
Sbjct: 149 AILILVTISSVIGSALLT 166


>ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago truncatula]
           gi|355513829|gb|AES95452.1| hypothetical protein
           MTR_5g025640 [Medicago truncatula]
          Length = 183

 Score =  134 bits (338), Expect = 4e-29
 Identities = 67/138 (48%), Positives = 93/138 (67%), Gaps = 1/138 (0%)
 Frame = +3

Query: 288 CIASELKRPKDKDVKFDGKLCHLPQNPAFILGVCACVCLLTAQIIGNTVIAMPFCSRGNK 467
           CIASE+ + K  D++++GKLC+LP + A+ LG+ A VCL  AQIIGN+++    CSR  K
Sbjct: 29  CIASEITKNKMDDLRWNGKLCYLPSSQAYGLGIAALVCLFLAQIIGNSMLFKNSCSRRKK 88

Query: 468 IFDWKQRV-PRCLLLLSWISFGTAATLLSVATSMNQMQPYGKGWLDGECYIVRDGVYIVA 644
              +K     R L+L+SW+SFG    LL VATSM++ QPYG GWL+GECY+V+ G Y  +
Sbjct: 89  NAQYKLPFFARLLILISWLSFGVTVILLIVATSMSKRQPYGAGWLNGECYLVKGGTYAGS 148

Query: 645 AALIFTTVMFILGSIMAT 698
           A LI  T+   +GS  +T
Sbjct: 149 AILILVTIGSAIGSSFST 166


Top