BLASTX nr result

ID: Coptis24_contig00018672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018672
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285601.1| PREDICTED: uncharacterized protein LOC100255...   164   9e-39
ref|XP_002298807.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38
ref|XP_002518320.1| ATP binding protein, putative [Ricinus commu...   160   1e-37
ref|XP_002313211.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_003528404.1| PREDICTED: uncharacterized protein LOC100820...   156   1e-36

>ref|XP_002285601.1| PREDICTED: uncharacterized protein LOC100255721 [Vitis vinifera]
          Length = 462

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/106 (71%), Positives = 90/106 (84%)
 Frame = +1

Query: 40  SGDSSPRSRDVDTEHPSWEEQPTNYKVKFMCSYGGKIQPKPNDNQLTYVGGDTKIFVIDR 219
           S DSSPRSR++DTE+ SW+E P+NYKVKFMCSYGGKI P+P DNQL YVGG+TKI  +DR
Sbjct: 10  SHDSSPRSREIDTENASWDEPPSNYKVKFMCSYGGKIHPRPQDNQLAYVGGETKILSVDR 69

Query: 220 NIKFIDIFSKLASICDSTDILFKYQLPGEDLDALISVTNNEDLEHM 357
           NIKF    SK++SIC+  ++  KYQLPGEDLDALISVTN+EDLEHM
Sbjct: 70  NIKFPGFMSKISSICEG-EVCLKYQLPGEDLDALISVTNDEDLEHM 114


>ref|XP_002298807.1| predicted protein [Populus trichocarpa] gi|222846065|gb|EEE83612.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/110 (68%), Positives = 94/110 (85%), Gaps = 4/110 (3%)
 Frame = +1

Query: 40  SGDSSPRSRDVDTEHPS-WEEQPT---NYKVKFMCSYGGKIQPKPNDNQLTYVGGDTKIF 207
           SGDSSPRSR++D ++P+ WEEQ     NYKVKFMCSYGGKI P+P+DNQL+Y+GG+TKI 
Sbjct: 13  SGDSSPRSREIDFDNPTPWEEQSQQSQNYKVKFMCSYGGKIHPRPHDNQLSYMGGETKIL 72

Query: 208 VIDRNIKFIDIFSKLASICDSTDILFKYQLPGEDLDALISVTNNEDLEHM 357
            +DRN+KF  + SKL+++C  TD+ FKYQLPGEDLDALISVTN++DLEHM
Sbjct: 73  AVDRNLKFPVMISKLSALCGDTDVAFKYQLPGEDLDALISVTNDDDLEHM 122


>ref|XP_002518320.1| ATP binding protein, putative [Ricinus communis]
           gi|223542540|gb|EEF44080.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 475

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/110 (70%), Positives = 92/110 (83%), Gaps = 4/110 (3%)
 Frame = +1

Query: 40  SGDSSPRSRDVDTEHPS-WEEQ---PTNYKVKFMCSYGGKIQPKPNDNQLTYVGGDTKIF 207
           SGDSSPRSR+++ E+P+ WE+Q   P +YK KFMCSYGGKI P+P+DNQL Y+GGDTKI 
Sbjct: 12  SGDSSPRSREIEFENPTPWEDQSQQPQSYKAKFMCSYGGKIHPRPHDNQLAYIGGDTKIL 71

Query: 208 VIDRNIKFIDIFSKLASICDSTDILFKYQLPGEDLDALISVTNNEDLEHM 357
            +DRNIKF  + SKLAS+   TDI FKYQLPGEDLDALISVTN++DLEHM
Sbjct: 72  AVDRNIKFSVMMSKLASLSGDTDISFKYQLPGEDLDALISVTNDDDLEHM 121


>ref|XP_002313211.1| predicted protein [Populus trichocarpa] gi|222849619|gb|EEE87166.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  158 bits (400), Expect = 4e-37
 Identities = 74/110 (67%), Positives = 92/110 (83%), Gaps = 4/110 (3%)
 Frame = +1

Query: 40  SGDSSPRSRDVDTEHPS-WEEQ---PTNYKVKFMCSYGGKIQPKPNDNQLTYVGGDTKIF 207
           SGDSSPRSR++D ++P+ WE+Q   P +YK KFMCSYGGKI P+P+DNQL Y+GG+TKI 
Sbjct: 13  SGDSSPRSREIDFDNPTPWEDQSQQPQSYKAKFMCSYGGKIHPRPHDNQLVYMGGETKIL 72

Query: 208 VIDRNIKFIDIFSKLASICDSTDILFKYQLPGEDLDALISVTNNEDLEHM 357
             DRNIKF  + SKL+++C  TD+ FKYQLPGEDLDALISVTN++DLEHM
Sbjct: 73  AADRNIKFSVMISKLSALCGDTDVAFKYQLPGEDLDALISVTNDDDLEHM 122


>ref|XP_003528404.1| PREDICTED: uncharacterized protein LOC100820420 [Glycine max]
          Length = 473

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/110 (69%), Positives = 92/110 (83%), Gaps = 4/110 (3%)
 Frame = +1

Query: 40  SGDSSPRSRDVDTEHPS-WEEQPT-NYKVKFMCSYGGKIQPKPNDNQLTYVGGDTKIFVI 213
           SG+SSPRSR++D E+P  W+EQ   NYK KFMCSYGGKIQP+ +DNQL+YVGGDTKI  +
Sbjct: 13  SGESSPRSREIDFENPPPWDEQQNQNYKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAV 72

Query: 214 DRNIKFIDIFSKLASICDST--DILFKYQLPGEDLDALISVTNNEDLEHM 357
           DR++KF    SKLA++CDS   D+ FKYQLPGEDLDALISVTN++DLEHM
Sbjct: 73  DRSVKFPAFLSKLAAVCDSAPQDLTFKYQLPGEDLDALISVTNDDDLEHM 122


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