BLASTX nr result

ID: Coptis24_contig00018670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018670
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001148699.1| tyrosyl-tRNA synthetase [Zea mays] gi|195621...   157   1e-36
gb|AFW61241.1| tyrosyl-tRNA synthetase [Zea mays]                     155   3e-36
gb|AFW57366.1| hypothetical protein ZEAMMB73_289556 [Zea mays]        155   5e-36
ref|NP_001149217.1| LOC100282839 [Zea mays] gi|195625536|gb|ACG3...   155   5e-36
gb|ACF82652.1| unknown [Zea mays]                                     155   5e-36

>ref|NP_001148699.1| tyrosyl-tRNA synthetase [Zea mays] gi|195621482|gb|ACG32571.1|
           tyrosyl-tRNA synthetase [Zea mays]
          Length = 380

 Score =  157 bits (396), Expect = 1e-36
 Identities = 67/84 (79%), Positives = 78/84 (92%)
 Frame = -3

Query: 316 KGILKTINVNKLVSASCRVKIWVTDWFAQLNNKMGGDFKKIRTIGEYLIEIWKAAGMNLD 137
           +G++KTINVNK+VSA C+VKIW+ DWFAQLNNKMGGD KKI+T+G Y+IEIWKAAGMNLD
Sbjct: 80  QGVVKTINVNKMVSAGCKVKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD 139

Query: 136 GVEFLWSSDEINSRPHEYWPLVMD 65
           GVEFLWSS+EIN R HEYWP+VMD
Sbjct: 140 GVEFLWSSEEINKRAHEYWPIVMD 163


>gb|AFW61241.1| tyrosyl-tRNA synthetase [Zea mays]
          Length = 382

 Score =  155 bits (393), Expect = 3e-36
 Identities = 66/84 (78%), Positives = 78/84 (92%)
 Frame = -3

Query: 316 KGILKTINVNKLVSASCRVKIWVTDWFAQLNNKMGGDFKKIRTIGEYLIEIWKAAGMNLD 137
           +G++KTINVNK+V+A C+VKIW+ DWFAQLNNKMGGD KKI+T+G Y+IEIWKAAGMNLD
Sbjct: 82  QGVVKTINVNKMVNAGCKVKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD 141

Query: 136 GVEFLWSSDEINSRPHEYWPLVMD 65
           GVEFLWSS+EIN R HEYWP+VMD
Sbjct: 142 GVEFLWSSEEINKRAHEYWPIVMD 165


>gb|AFW57366.1| hypothetical protein ZEAMMB73_289556 [Zea mays]
          Length = 378

 Score =  155 bits (391), Expect = 5e-36
 Identities = 67/84 (79%), Positives = 77/84 (91%)
 Frame = -3

Query: 316 KGILKTINVNKLVSASCRVKIWVTDWFAQLNNKMGGDFKKIRTIGEYLIEIWKAAGMNLD 137
           +GI+KTINVNK+V A C+VKIW+ DWFAQLNNKMGGD KKI+T+G Y+IEIWKAAGMNLD
Sbjct: 79  QGIVKTINVNKMVRAGCKVKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD 138

Query: 136 GVEFLWSSDEINSRPHEYWPLVMD 65
           GVEFLWSS+EIN R HEYWP+VMD
Sbjct: 139 GVEFLWSSEEINRRAHEYWPIVMD 162


>ref|NP_001149217.1| LOC100282839 [Zea mays] gi|195625536|gb|ACG34598.1| tyrosyl-tRNA
           synthetase [Zea mays] gi|413917433|gb|AFW57365.1|
           tyrosyl-tRNA synthetase [Zea mays]
          Length = 379

 Score =  155 bits (391), Expect = 5e-36
 Identities = 67/84 (79%), Positives = 77/84 (91%)
 Frame = -3

Query: 316 KGILKTINVNKLVSASCRVKIWVTDWFAQLNNKMGGDFKKIRTIGEYLIEIWKAAGMNLD 137
           +GI+KTINVNK+V A C+VKIW+ DWFAQLNNKMGGD KKI+T+G Y+IEIWKAAGMNLD
Sbjct: 79  QGIVKTINVNKMVRAGCKVKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD 138

Query: 136 GVEFLWSSDEINSRPHEYWPLVMD 65
           GVEFLWSS+EIN R HEYWP+VMD
Sbjct: 139 GVEFLWSSEEINRRAHEYWPIVMD 162


>gb|ACF82652.1| unknown [Zea mays]
          Length = 379

 Score =  155 bits (391), Expect = 5e-36
 Identities = 67/84 (79%), Positives = 77/84 (91%)
 Frame = -3

Query: 316 KGILKTINVNKLVSASCRVKIWVTDWFAQLNNKMGGDFKKIRTIGEYLIEIWKAAGMNLD 137
           +GI+KTINVNK+V A C+VKIW+ DWFAQLNNKMGGD KKI+T+G Y+IEIWKAAGMNLD
Sbjct: 79  QGIVKTINVNKMVRAGCKVKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD 138

Query: 136 GVEFLWSSDEINSRPHEYWPLVMD 65
           GVEFLWSS+EIN R HEYWP+VMD
Sbjct: 139 GVEFLWSSEEINRRAHEYWPIVMD 162


Top