BLASTX nr result
ID: Coptis24_contig00018667
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018667 (475 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat... 84 1e-14 emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera] 84 1e-14 ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat... 84 2e-14 ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat... 83 3e-14 ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat... 82 5e-14 >ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Vitis vinifera] Length = 577 Score = 84.0 bits (206), Expect = 1e-14 Identities = 37/96 (38%), Positives = 64/96 (66%) Frame = +2 Query: 2 TYTTMINGFCKEGMLIDAQSLFIEMEKKGVAPNDHTFNIMVQGFLKEKDTQKALKFHEKM 181 TYT MING C++G+L +A LF EM++KG +PN T+N++ +GFL+ +T + ++ ++M Sbjct: 481 TYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 540 Query: 182 IDRGFSTTAETMSMILNLLVTDEMNDEGGVILRKFL 289 + RGFS T ++++ +L D ++ IL +FL Sbjct: 541 LARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 576 >emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera] Length = 586 Score = 84.0 bits (206), Expect = 1e-14 Identities = 37/96 (38%), Positives = 64/96 (66%) Frame = +2 Query: 2 TYTTMINGFCKEGMLIDAQSLFIEMEKKGVAPNDHTFNIMVQGFLKEKDTQKALKFHEKM 181 TYT MING C++G+L +A LF EM++KG +PN T+N++ +GFL+ +T + ++ ++M Sbjct: 490 TYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 549 Query: 182 IDRGFSTTAETMSMILNLLVTDEMNDEGGVILRKFL 289 + RGFS T ++++ +L D ++ IL +FL Sbjct: 550 LARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585 >ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Vitis vinifera] Length = 592 Score = 83.6 bits (205), Expect = 2e-14 Identities = 38/96 (39%), Positives = 63/96 (65%) Frame = +2 Query: 2 TYTTMINGFCKEGMLIDAQSLFIEMEKKGVAPNDHTFNIMVQGFLKEKDTQKALKFHEKM 181 TYT MING C +G+L +A LF EM G +P+D T+N++ +GFL+ +T A++ ++M Sbjct: 496 TYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEM 555 Query: 182 IDRGFSTTAETMSMILNLLVTDEMNDEGGVILRKFL 289 + RGFS A T+++I+ +L D ++ IL +F+ Sbjct: 556 LGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFV 591 >ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Vitis vinifera] Length = 572 Score = 82.8 bits (203), Expect = 3e-14 Identities = 36/96 (37%), Positives = 64/96 (66%) Frame = +2 Query: 2 TYTTMINGFCKEGMLIDAQSLFIEMEKKGVAPNDHTFNIMVQGFLKEKDTQKALKFHEKM 181 TYT MING C++G+L +A LF EM++ G +PN T+N++ +GFL+ +T +A++ ++M Sbjct: 476 TYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEM 535 Query: 182 IDRGFSTTAETMSMILNLLVTDEMNDEGGVILRKFL 289 + RGFS T ++++ +L D ++ IL +F+ Sbjct: 536 LSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFV 571 >ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Vitis vinifera] Length = 588 Score = 82.0 bits (201), Expect = 5e-14 Identities = 36/96 (37%), Positives = 61/96 (63%) Frame = +2 Query: 2 TYTTMINGFCKEGMLIDAQSLFIEMEKKGVAPNDHTFNIMVQGFLKEKDTQKALKFHEKM 181 TY MI+G CK+G+L +A LF EM K G +PND T+N++ +GFL+ + + ++ E+M Sbjct: 492 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 551 Query: 182 IDRGFSTTAETMSMILNLLVTDEMNDEGGVILRKFL 289 + RGFS T ++++ +L D ++ IL K++ Sbjct: 552 LARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYV 587