BLASTX nr result

ID: Coptis24_contig00018664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018664
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283241.1| PREDICTED: uncharacterized protein LOC100263...   196   3e-48
ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265...   192   4e-47
emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]   191   1e-46
ref|XP_002512452.1| conserved hypothetical protein [Ricinus comm...   182   5e-44
ref|XP_002320336.1| predicted protein [Populus trichocarpa] gi|2...   181   9e-44

>ref|XP_002283241.1| PREDICTED: uncharacterized protein LOC100263080 [Vitis vinifera]
           gi|296089728|emb|CBI39547.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  196 bits (498), Expect = 3e-48
 Identities = 94/143 (65%), Positives = 114/143 (79%)
 Frame = -2

Query: 531 SSVTTNAETAYELLQRYNFPVGLLPKGVVNYTLENTSGKFSVTLNGSCSFALEDSSYQLK 352
           +S + ++ T YE+LQ YNFPVGLLPKGV+ Y L  ++GKFS + NGSCSF+LE  SYQLK
Sbjct: 26  ASSSNDSPTVYEVLQDYNFPVGLLPKGVIGYDLNTSTGKFSASFNGSCSFSLE-GSYQLK 84

Query: 351 YKSTIKGTIMKNKLKDLQGVSVKVFLFWVNIVEVDRSGEDLDFWVGIASATFPIGNFEEC 172
           YKSTIKG I K KL  L+GVSVK+F  WV+I+EV RSG+D+DF VGIASA F I NFEEC
Sbjct: 85  YKSTIKGNISKGKLSSLEGVSVKLFFIWVDIIEVRRSGDDIDFSVGIASAGFSIDNFEEC 144

Query: 171 PRCGCGLDCVNDQVRKFRTHPFV 103
           P+CGCGL+C N QV K R++PFV
Sbjct: 145 PQCGCGLNCGNRQVNKLRSNPFV 167


>ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265898 [Vitis vinifera]
          Length = 162

 Score =  192 bits (488), Expect = 4e-47
 Identities = 93/146 (63%), Positives = 113/146 (77%), Gaps = 3/146 (2%)
 Frame = -2

Query: 531 SSVTT---NAETAYELLQRYNFPVGLLPKGVVNYTLENTSGKFSVTLNGSCSFALEDSSY 361
           SS+ T   ++ TAYE+LQ YNFP+GLLPKG + Y L+  +GKF+   NGSC F+LE  SY
Sbjct: 15  SSIVTADDDSPTAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFNGSCGFSLE-GSY 73

Query: 360 QLKYKSTIKGTIMKNKLKDLQGVSVKVFLFWVNIVEVDRSGEDLDFWVGIASATFPIGNF 181
           QLKYKSTI G I +NKL  L G+SVKV   W+NIVEV R+G+D++F VGIASA FPI NF
Sbjct: 74  QLKYKSTISGYISQNKLTKLSGISVKVLFLWLNIVEVTRNGDDMEFSVGIASAAFPIDNF 133

Query: 180 EECPRCGCGLDCVNDQVRKFRTHPFV 103
            ECP+CGCGLDCVN QVRK +T+PFV
Sbjct: 134 FECPQCGCGLDCVNGQVRKLKTNPFV 159


>emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]
          Length = 162

 Score =  191 bits (484), Expect = 1e-46
 Identities = 93/146 (63%), Positives = 112/146 (76%), Gaps = 3/146 (2%)
 Frame = -2

Query: 531 SSVTT---NAETAYELLQRYNFPVGLLPKGVVNYTLENTSGKFSVTLNGSCSFALEDSSY 361
           SS+ T   ++ TAYE+LQ YNFP+GLLPKG + Y L+  +GKF+   NGSC F+LE  SY
Sbjct: 15  SSIVTADDDSPTAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFNGSCGFSLE-GSY 73

Query: 360 QLKYKSTIKGTIMKNKLKDLQGVSVKVFLFWVNIVEVDRSGEDLDFWVGIASATFPIGNF 181
           QLKYKSTI G I +NKL  L G SVKV   W+NIVEV R+G+D++F VGIASA FPI NF
Sbjct: 74  QLKYKSTISGYISQNKLTKLSGXSVKVLFLWLNIVEVTRNGDDMEFSVGIASAAFPIDNF 133

Query: 180 EECPRCGCGLDCVNDQVRKFRTHPFV 103
            ECP+CGCGLDCVN QVRK +T+PFV
Sbjct: 134 FECPQCGCGLDCVNGQVRKLKTNPFV 159


>ref|XP_002512452.1| conserved hypothetical protein [Ricinus communis]
           gi|255591191|ref|XP_002535460.1| conserved hypothetical
           protein [Ricinus communis] gi|223523035|gb|EEF26923.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223548413|gb|EEF49904.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  182 bits (461), Expect = 5e-44
 Identities = 91/136 (66%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
 Frame = -2

Query: 507 TAYELLQRYNFPVGLLPKGVVNYTLENTSGKFSVTLNGSCSFALEDSSYQLKYKSTIKGT 328
           TAYE+L  YNFP GLLPKGV+ Y L+ TSGKFS  LNG+CSF+LE  SYQL+YKSTI+G 
Sbjct: 36  TAYEILSDYNFPKGLLPKGVIGYDLDTTSGKFSAFLNGTCSFSLE-GSYQLRYKSTIRGH 94

Query: 327 IMKNKLKDLQGVSVKVFLFWVNIVEVDRSGEDLDFWVGIASATFPIGNFEECPRCGCGLD 148
           I K KL  LQGVSVK+   WV+IVEV RSG+DL+F VGIA A FPI NFEE P+CGCGLD
Sbjct: 95  ISKGKLSSLQGVSVKLLFMWVDIVEVSRSGDDLEFSVGIAGAGFPIDNFEESPQCGCGLD 154

Query: 147 CVN-DQVRKFRTHPFV 103
           C +  +V K R++PFV
Sbjct: 155 CGDRRKVSKMRSNPFV 170


>ref|XP_002320336.1| predicted protein [Populus trichocarpa] gi|222861109|gb|EEE98651.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  181 bits (459), Expect = 9e-44
 Identities = 87/146 (59%), Positives = 110/146 (75%), Gaps = 1/146 (0%)
 Frame = -2

Query: 537 SNSSVTTNAETAYELLQRYNFPVGLLPKGVVNYTLENTSGKFSVTLNGSCSFALEDSSYQ 358
           S+ ++T N  T YE++  YNFP+G+LPKG   Y L+ T+G+F   LNGSCSF++E  SYQ
Sbjct: 20  SSLTITDNLPTVYEIIAGYNFPIGILPKGATGYKLDKTTGEFGAFLNGSCSFSVE-GSYQ 78

Query: 357 LKYKSTIKGTIMKNKLKDLQGVSVKVFLFWVNIVEVDRSGEDLDFWVGIASATFPIGNFE 178
           L YKSTI G I  N+LK L GVSVKV  FW+NIVEV R+G++LDF VGIASA+FPI NF 
Sbjct: 79  LNYKSTISGYISDNRLKSLSGVSVKVLFFWLNIVEVIRNGDELDFSVGIASASFPIDNFY 138

Query: 177 ECPRCGCGLDCVN-DQVRKFRTHPFV 103
           ECP+CGCGL+C N +   K R++PFV
Sbjct: 139 ECPQCGCGLNCNNVELATKLRSNPFV 164


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