BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018661
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002305601.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003596627.1| F-box/LRR-repeat protein [Medicago truncatul...    59   5e-07
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    58   9e-07

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
 Frame = -3

Query: 459 SNIIKFSLKCR-EFDAAHIIRWITTAKKCNVEELLLTI-SLNCRYVFPLCLFTSESLKVL 286
           SNI++F L C  + D + +  WI+ A   NV++L L +      +V P CLF  E+L  L
Sbjct: 95  SNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEASFVLPHCLFNCETLTEL 154

Query: 285 EIGSERFSKTETVVSISIPSSFCFATLKVLRLQYITISFDRSLQKVSLSFPTMEEFIIKG 106
           EI      K        +PSS   + LK+L L  +  + D S Q++  S P + E  I  
Sbjct: 155 EINMPYILK--------LPSSISLSCLKILNLYEVIFTDDHSTQQL-FSLPNLVELEIHE 205

Query: 105 CTWLGIKNIDISAPKLQMLTIDD 37
           C W+ +  + ISAPKLQ L I +
Sbjct: 206 CNWMNLVAVSISAPKLQSLDIHE 228


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
 Frame = -3

Query: 471 LLDVSNIIKFSLKCREFDAAHIIRWITTAKKCNVEELLLTI---SLNCRYVFPLCLFTSE 301
           L D SNI KF+L C   DA     W++ A   NV+EL +       +  +V PLCLFT  
Sbjct: 104 LRDSSNIEKFTLSCGIDDATRTRTWVSAAVNRNVKELCVNFYEGGESESFVSPLCLFTCA 163

Query: 300 SLKVLEIGSERFSKTETVVSISIPSSFCFATLKVLRLQYITISFDRSLQKVSLSFPTMEE 121
           +L  L+I S    +  +  SIS+P       LK+L LQ++    + S Q++ L+  T+E+
Sbjct: 164 TLTKLKITSHGVLRLSS--SISLP------CLKILSLQHVVFPDEDSTQQI-LNLRTLEK 214

Query: 120 FIIKGCTWLGIKNIDISAPKLQMLTI 43
             I    W  +K I ISAPKL+ L I
Sbjct: 215 LKISYYDWKNLKAITISAPKLRSLDI 240


>ref|XP_002305601.1| predicted protein [Populus trichocarpa] gi|222848565|gb|EEE86112.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
 Frame = -3

Query: 420 DAAHIIRWITTAKKCNVEELLLTI-SLNC-RYVFPLCLFTSESLKVLEIGSERFSKTETV 247
           DA+HI  WI  A  C  +EL L +   N    + P CLFT +SL VLE+           
Sbjct: 82  DASHINTWIFAALCCKFQELKLDLYQYNANESLLPHCLFTFQSLTVLEL--------YLF 133

Query: 246 VSISIPSSFCFATLKVLRLQYITISFDRSLQK----VSLSFPTMEEFIIKGCTWLGIKNI 79
             + + S+ C   LK L+L +IT   D S Q     ++L   T++E     CTW   K +
Sbjct: 134 HDLKLLSTICLPNLKELKLSFITFVDDHSTQLFDGCLNLRKVTLDE-----CTWKDEKFV 188

Query: 78  DISAPKLQMLTI-----DDGWGREFRDCEI 4
            IS+P L+ L+I     DDG      DC++
Sbjct: 189 FISSPMLKFLSICDLTWDDG---SPNDCQV 215


>ref|XP_003596627.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485675|gb|AES66878.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 436

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
 Frame = -3

Query: 468 LDVSNIIKFSLKCRE------FDAAHIIRWITTAKKCNVEELLLTIS--LNCRYVFPLCL 313
           L+ ++I  FSLK  E       ++ +I +WI+      V  L + +   L  + V    L
Sbjct: 93  LNSAHIQSFSLKMSEEYNYFYINSFNINKWISVVVNLRVRNLCIYLKKGLEIQLVSFDAL 152

Query: 312 FTSESLKVLEIGSERFSKTETVVSISIPSSFCFATLKVLRLQYITISFDRSLQK--VSLS 139
           F  +SL+ L +    F+         +PS  C ++L +L+L  ITI+ D S +   ++L+
Sbjct: 153 FKCQSLEELVLNGCAFT---------LPSFVCLSSLTILKLSRITITCDSSNESKTLALN 203

Query: 138 FPTMEEFIIKGCTWLGIKNIDISAPKLQMLTIDDGWGREFRDCEIK 1
           FP + ++    CT+L +K++ +  P L++++I          CEIK
Sbjct: 204 FPALRKYETLDCTFLNVKSVTLQVPLLEVVSISYDPFYHKSHCEIK 249


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
 Frame = -3

Query: 471 LLDVSNIIK---FSLKCREFDAAHIIRWITTAKKCNVEELLLTI-SLNCRYVFPLCLFTS 304
           LL  SN IK     L     DA  +   +++A   +V +L L + S N R+V P     S
Sbjct: 89  LLHKSNRIKKLFIELPVTIVDAGKVSSMLSSALMHDVHDLTLNLESENSRFVLPNSFSAS 148

Query: 303 ESLKVLEIGSERFSKTETVVSISIPSSFCFATLKVLRLQYITISFDRSLQKVSLSFPTME 124
            SL  L+I              S+P   CF +LK+L   ++T + ++S Q++    P ++
Sbjct: 149 RSLTKLDIVFGFLD--------SVPDGICFPSLKILSFAHVTFTNEKSAQRLFSGCPVLQ 200

Query: 123 EFIIKGCTWLGIKNIDISAPKLQMLTI 43
           +   + C W+ I NI ++ P L+ L I
Sbjct: 201 DLSFEKCYWVNI-NISVAIPTLKKLDI 226