BLASTX nr result

ID: Coptis24_contig00018657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018657
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84671.1| unknown [Medicago truncatula]                          138   4e-31
ref|XP_003607043.1| Signal recognition particle receptor subunit...   138   4e-31
gb|AFK37552.1| unknown [Medicago truncatula]                          138   5e-31
gb|AFK36205.1| unknown [Lotus japonicus]                              137   7e-31
ref|XP_002265544.2| PREDICTED: signal recognition particle recep...   137   9e-31

>gb|ACJ84671.1| unknown [Medicago truncatula]
          Length = 260

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/82 (79%), Positives = 77/82 (93%)
 Frame = +2

Query: 2   KTDKVTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTV 181
           KTDKVTAHTKEFIR+Q+EKE+DKLR+SR+A+SEAD+TNEFTLGV GEPFSF QC NKVT 
Sbjct: 178 KTDKVTAHTKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTT 237

Query: 182 AESSGLTGEISHLEQFIREYVR 247
           A++SGLTGEIS L++FIREYV+
Sbjct: 238 ADASGLTGEISQLQEFIREYVK 259


>ref|XP_003607043.1| Signal recognition particle receptor subunit beta [Medicago
           truncatula] gi|355508098|gb|AES89240.1| Signal
           recognition particle receptor subunit beta [Medicago
           truncatula]
          Length = 260

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/82 (79%), Positives = 77/82 (93%)
 Frame = +2

Query: 2   KTDKVTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTV 181
           KTDKVTAHTKEFIR+Q+EKE+DKLR+SR+A+SEAD+TNEFTLGV GEPFSF QC NKVT 
Sbjct: 178 KTDKVTAHTKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTT 237

Query: 182 AESSGLTGEISHLEQFIREYVR 247
           A++SGLTGEIS L++FIREYV+
Sbjct: 238 ADASGLTGEISQLQEFIREYVK 259


>gb|AFK37552.1| unknown [Medicago truncatula]
          Length = 260

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/82 (79%), Positives = 77/82 (93%)
 Frame = +2

Query: 2   KTDKVTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTV 181
           KTDKVTAHTKEFIR+Q+EKE+DKLR+SR+A+SEAD+TNEFTLGV GEPFSF QC NKVT 
Sbjct: 178 KTDKVTAHTKEFIRRQVEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTT 237

Query: 182 AESSGLTGEISHLEQFIREYVR 247
           A++SGLTGEIS L++FIREYV+
Sbjct: 238 ADASGLTGEISQLQEFIREYVK 259


>gb|AFK36205.1| unknown [Lotus japonicus]
          Length = 259

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/83 (79%), Positives = 76/83 (91%)
 Frame = +2

Query: 2   KTDKVTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTV 181
           KTDKVTAHTKEFIR+QLEKE+DKLR SR+A+S+AD+TNEFTLGV GE FSF QC NKVT 
Sbjct: 177 KTDKVTAHTKEFIRRQLEKEIDKLRASRSAVSDADVTNEFTLGVPGEAFSFTQCCNKVTT 236

Query: 182 AESSGLTGEISHLEQFIREYVRP 250
           A++SGLTGEIS LE+FIREYV+P
Sbjct: 237 ADASGLTGEISQLEEFIREYVKP 259


>ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like
           [Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed
           protein product [Vitis vinifera]
          Length = 259

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = +2

Query: 2   KTDKVTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTV 181
           KTDKVTAHTKEFIRKQLEKE++K R SR+A+S AD+ NEFTLGV GE F F QCHNKVTV
Sbjct: 177 KTDKVTAHTKEFIRKQLEKEIEKFRASRSAISAADVVNEFTLGVPGEAFGFSQCHNKVTV 236

Query: 182 AESSGLTGEISHLEQFIREYVRP 250
           A++SGLTGEIS LE+FIREYV+P
Sbjct: 237 ADASGLTGEISQLEEFIREYVKP 259


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