BLASTX nr result
ID: Coptis24_contig00018657
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018657 (298 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACJ84671.1| unknown [Medicago truncatula] 138 4e-31 ref|XP_003607043.1| Signal recognition particle receptor subunit... 138 4e-31 gb|AFK37552.1| unknown [Medicago truncatula] 138 5e-31 gb|AFK36205.1| unknown [Lotus japonicus] 137 7e-31 ref|XP_002265544.2| PREDICTED: signal recognition particle recep... 137 9e-31 >gb|ACJ84671.1| unknown [Medicago truncatula] Length = 260 Score = 138 bits (348), Expect = 4e-31 Identities = 65/82 (79%), Positives = 77/82 (93%) Frame = +2 Query: 2 KTDKVTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTV 181 KTDKVTAHTKEFIR+Q+EKE+DKLR+SR+A+SEAD+TNEFTLGV GEPFSF QC NKVT Sbjct: 178 KTDKVTAHTKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTT 237 Query: 182 AESSGLTGEISHLEQFIREYVR 247 A++SGLTGEIS L++FIREYV+ Sbjct: 238 ADASGLTGEISQLQEFIREYVK 259 >ref|XP_003607043.1| Signal recognition particle receptor subunit beta [Medicago truncatula] gi|355508098|gb|AES89240.1| Signal recognition particle receptor subunit beta [Medicago truncatula] Length = 260 Score = 138 bits (348), Expect = 4e-31 Identities = 65/82 (79%), Positives = 77/82 (93%) Frame = +2 Query: 2 KTDKVTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTV 181 KTDKVTAHTKEFIR+Q+EKE+DKLR+SR+A+SEAD+TNEFTLGV GEPFSF QC NKVT Sbjct: 178 KTDKVTAHTKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTT 237 Query: 182 AESSGLTGEISHLEQFIREYVR 247 A++SGLTGEIS L++FIREYV+ Sbjct: 238 ADASGLTGEISQLQEFIREYVK 259 >gb|AFK37552.1| unknown [Medicago truncatula] Length = 260 Score = 138 bits (347), Expect = 5e-31 Identities = 65/82 (79%), Positives = 77/82 (93%) Frame = +2 Query: 2 KTDKVTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTV 181 KTDKVTAHTKEFIR+Q+EKE+DKLR+SR+A+SEAD+TNEFTLGV GEPFSF QC NKVT Sbjct: 178 KTDKVTAHTKEFIRRQVEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTT 237 Query: 182 AESSGLTGEISHLEQFIREYVR 247 A++SGLTGEIS L++FIREYV+ Sbjct: 238 ADASGLTGEISQLQEFIREYVK 259 >gb|AFK36205.1| unknown [Lotus japonicus] Length = 259 Score = 137 bits (346), Expect = 7e-31 Identities = 66/83 (79%), Positives = 76/83 (91%) Frame = +2 Query: 2 KTDKVTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTV 181 KTDKVTAHTKEFIR+QLEKE+DKLR SR+A+S+AD+TNEFTLGV GE FSF QC NKVT Sbjct: 177 KTDKVTAHTKEFIRRQLEKEIDKLRASRSAVSDADVTNEFTLGVPGEAFSFTQCCNKVTT 236 Query: 182 AESSGLTGEISHLEQFIREYVRP 250 A++SGLTGEIS LE+FIREYV+P Sbjct: 237 ADASGLTGEISQLEEFIREYVKP 259 >ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like [Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed protein product [Vitis vinifera] Length = 259 Score = 137 bits (345), Expect = 9e-31 Identities = 65/83 (78%), Positives = 74/83 (89%) Frame = +2 Query: 2 KTDKVTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTV 181 KTDKVTAHTKEFIRKQLEKE++K R SR+A+S AD+ NEFTLGV GE F F QCHNKVTV Sbjct: 177 KTDKVTAHTKEFIRKQLEKEIEKFRASRSAISAADVVNEFTLGVPGEAFGFSQCHNKVTV 236 Query: 182 AESSGLTGEISHLEQFIREYVRP 250 A++SGLTGEIS LE+FIREYV+P Sbjct: 237 ADASGLTGEISQLEEFIREYVKP 259