BLASTX nr result

ID: Coptis24_contig00018634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018634
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21383.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247...   162   3e-38
emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]   160   1e-37
dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]                          155   4e-36
ref|XP_002310126.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36

>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  162 bits (409), Expect = 3e-38
 Identities = 84/135 (62%), Positives = 101/135 (74%)
 Frame = -1

Query: 406 PQNAPIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEH 227
           P   P  S+    Y     D++RTLF+AGLPEDV+ REIYNLFREFPGYESS LR  +++
Sbjct: 56  PPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQN 115

Query: 226 NKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRSRTDDGASGSSD 47
           ++P+ FAVFLDQ SA+AAM ALNG+VFDLEK STLYI LAKSNS+SKRSR DD   G  D
Sbjct: 116 SQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPG-LD 174

Query: 46  KKFRGSAAYSNFHDT 2
           KK +GSA +S   D+
Sbjct: 175 KKVKGSAGFSRPPDS 189


>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
          Length = 336

 Score =  162 bits (409), Expect = 3e-38
 Identities = 84/135 (62%), Positives = 101/135 (74%)
 Frame = -1

Query: 406 PQNAPIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEH 227
           P   P  S+    Y     D++RTLF+AGLPEDV+ REIYNLFREFPGYESS LR  +++
Sbjct: 59  PPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQN 118

Query: 226 NKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRSRTDDGASGSSD 47
           ++P+ FAVFLDQ SA+AAM ALNG+VFDLEK STLYI LAKSNS+SKRSR DD   G  D
Sbjct: 119 SQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPG-LD 177

Query: 46  KKFRGSAAYSNFHDT 2
           KK +GSA +S   D+
Sbjct: 178 KKVKGSAGFSRPPDS 192


>emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
          Length = 335

 Score =  160 bits (405), Expect = 1e-37
 Identities = 83/135 (61%), Positives = 100/135 (74%)
 Frame = -1

Query: 406 PQNAPIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEH 227
           P   P  S+    Y     D++RTLF+AGLPEDV+ REIYNLFREFPGYESS LR  +++
Sbjct: 56  PPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQN 115

Query: 226 NKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRSRTDDGASGSSD 47
           ++P+ FAVFLDQ SA+A M ALNG+VFDLEK STLYI LAKSNS+SKRSR DD   G  D
Sbjct: 116 SQPFAFAVFLDQQSAIATMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPG-LD 174

Query: 46  KKFRGSAAYSNFHDT 2
           KK +GSA +S   D+
Sbjct: 175 KKVKGSAGFSRPPDS 189


>dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
          Length = 316

 Score =  155 bits (391), Expect = 4e-36
 Identities = 81/124 (65%), Positives = 96/124 (77%)
 Frame = -1

Query: 394 PIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEHNKPY 215
           P  S+   Y     +D +RTLFVAGLP+DV+ REIYNLFREFPGYESS LR  T+ ++P+
Sbjct: 58  PFTSYPPSYAPHAPHDPVRTLFVAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTSQPF 117

Query: 214 GFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRSRTDDGASGSSDKKFR 35
            FA F+DQPSAVAAM ALNG+VFDLEK STLYI LAKSNS+SKRSR+DD  SG  DK+ +
Sbjct: 118 AFATFIDQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRSDDEWSG-LDKRVK 176

Query: 34  GSAA 23
            S A
Sbjct: 177 ASPA 180


>ref|XP_002310126.1| predicted protein [Populus trichocarpa] gi|222853029|gb|EEE90576.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  154 bits (389), Expect = 7e-36
 Identities = 83/133 (62%), Positives = 99/133 (74%), Gaps = 3/133 (2%)
 Frame = -1

Query: 406 PQNAPIPSHHNQYYGDQFY---DDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRA 236
           P   P P+    Y     Y   D +RTLFVAGLP+D++ RE+YNLFREFPGYESS LR  
Sbjct: 48  PHPQPPPAPFVSYVSVPAYVPHDQVRTLFVAGLPDDIKPREMYNLFREFPGYESSHLRTP 107

Query: 235 TEHNKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRSRTDDGASG 56
           +++++P+ FA F DQPSAVAAM ALNG+VFDLEK STLYI LAKSNS+SKRSRTDD  S 
Sbjct: 108 SQNSQPFAFATFTDQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWS- 166

Query: 55  SSDKKFRGSAAYS 17
           S DKK R S+ +S
Sbjct: 167 SLDKKARVSSGFS 179


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