BLASTX nr result
ID: Coptis24_contig00018617
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018617 (184 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4... 87 1e-15 emb|CBI33734.3| unnamed protein product [Vitis vinifera] 87 1e-15 gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum] 87 1e-15 ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2... 86 3e-15 ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|2... 84 9e-15 >ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera] Length = 809 Score = 87.4 bits (215), Expect = 1e-15 Identities = 39/61 (63%), Positives = 47/61 (77%) Frame = -1 Query: 184 AKYIDHMVCLVTVMHDLLVKTKYTERTTTVPIPSDFCCPLSLELMRDPVIVASGQTYERT 5 A+YID M+ L T MHD + TK ++ +PIP+DFCCPLSLELM DPVIVASGQTYER Sbjct: 205 AEYIDQMITLATQMHDRFIITKQSQSCNPIPIPADFCCPLSLELMTDPVIVASGQTYERA 264 Query: 4 Y 2 + Sbjct: 265 F 265 >emb|CBI33734.3| unnamed protein product [Vitis vinifera] Length = 682 Score = 87.4 bits (215), Expect = 1e-15 Identities = 39/61 (63%), Positives = 47/61 (77%) Frame = -1 Query: 184 AKYIDHMVCLVTVMHDLLVKTKYTERTTTVPIPSDFCCPLSLELMRDPVIVASGQTYERT 5 A+YID M+ L T MHD + TK ++ +PIP+DFCCPLSLELM DPVIVASGQTYER Sbjct: 205 AEYIDQMITLATQMHDRFIITKQSQSCNPIPIPADFCCPLSLELMTDPVIVASGQTYERA 264 Query: 4 Y 2 + Sbjct: 265 F 265 >gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum] Length = 790 Score = 87.4 bits (215), Expect = 1e-15 Identities = 40/60 (66%), Positives = 47/60 (78%) Frame = -1 Query: 181 KYIDHMVCLVTVMHDLLVKTKYTERTTTVPIPSDFCCPLSLELMRDPVIVASGQTYERTY 2 +YI+ M+ LV+ MHD V TK ++ T VPIP DFCCPLSLELM DPVIVASGQTYER + Sbjct: 206 EYIEQMITLVSHMHDCFVTTKQSQSCTAVPIPPDFCCPLSLELMTDPVIVASGQTYERAF 265 >ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1| predicted protein [Populus trichocarpa] Length = 698 Score = 85.9 bits (211), Expect = 3e-15 Identities = 39/61 (63%), Positives = 50/61 (81%) Frame = -1 Query: 184 AKYIDHMVCLVTVMHDLLVKTKYTERTTTVPIPSDFCCPLSLELMRDPVIVASGQTYERT 5 A++ID M+ LVT +H+ LV K ++ ++ VPIP+DFCCPLSLELM DPVIVASGQTYER Sbjct: 205 AEFIDQMIALVTHIHERLVLIKQSQSSSPVPIPADFCCPLSLELMTDPVIVASGQTYERA 264 Query: 4 Y 2 + Sbjct: 265 F 265 >ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|222855944|gb|EEE93491.1| predicted protein [Populus trichocarpa] Length = 822 Score = 84.3 bits (207), Expect = 9e-15 Identities = 39/61 (63%), Positives = 49/61 (80%) Frame = -1 Query: 184 AKYIDHMVCLVTVMHDLLVKTKYTERTTTVPIPSDFCCPLSLELMRDPVIVASGQTYERT 5 A++ID ++ LVT MH+ LV K ++ + VPIP+DFCCPLSLELM DPVIVASGQTYER Sbjct: 207 AEFIDQIITLVTRMHERLVLIKQSQTYSPVPIPADFCCPLSLELMTDPVIVASGQTYERA 266 Query: 4 Y 2 + Sbjct: 267 F 267