BLASTX nr result

ID: Coptis24_contig00018617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018617
         (184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4...    87   1e-15
emb|CBI33734.3| unnamed protein product [Vitis vinifera]               87   1e-15
gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]       87   1e-15
ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15

>ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 809

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/61 (63%), Positives = 47/61 (77%)
 Frame = -1

Query: 184 AKYIDHMVCLVTVMHDLLVKTKYTERTTTVPIPSDFCCPLSLELMRDPVIVASGQTYERT 5
           A+YID M+ L T MHD  + TK ++    +PIP+DFCCPLSLELM DPVIVASGQTYER 
Sbjct: 205 AEYIDQMITLATQMHDRFIITKQSQSCNPIPIPADFCCPLSLELMTDPVIVASGQTYERA 264

Query: 4   Y 2
           +
Sbjct: 265 F 265


>emb|CBI33734.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/61 (63%), Positives = 47/61 (77%)
 Frame = -1

Query: 184 AKYIDHMVCLVTVMHDLLVKTKYTERTTTVPIPSDFCCPLSLELMRDPVIVASGQTYERT 5
           A+YID M+ L T MHD  + TK ++    +PIP+DFCCPLSLELM DPVIVASGQTYER 
Sbjct: 205 AEYIDQMITLATQMHDRFIITKQSQSCNPIPIPADFCCPLSLELMTDPVIVASGQTYERA 264

Query: 4   Y 2
           +
Sbjct: 265 F 265


>gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]
          Length = 790

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/60 (66%), Positives = 47/60 (78%)
 Frame = -1

Query: 181 KYIDHMVCLVTVMHDLLVKTKYTERTTTVPIPSDFCCPLSLELMRDPVIVASGQTYERTY 2
           +YI+ M+ LV+ MHD  V TK ++  T VPIP DFCCPLSLELM DPVIVASGQTYER +
Sbjct: 206 EYIEQMITLVSHMHDCFVTTKQSQSCTAVPIPPDFCCPLSLELMTDPVIVASGQTYERAF 265


>ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/61 (63%), Positives = 50/61 (81%)
 Frame = -1

Query: 184 AKYIDHMVCLVTVMHDLLVKTKYTERTTTVPIPSDFCCPLSLELMRDPVIVASGQTYERT 5
           A++ID M+ LVT +H+ LV  K ++ ++ VPIP+DFCCPLSLELM DPVIVASGQTYER 
Sbjct: 205 AEFIDQMIALVTHIHERLVLIKQSQSSSPVPIPADFCCPLSLELMTDPVIVASGQTYERA 264

Query: 4   Y 2
           +
Sbjct: 265 F 265


>ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|222855944|gb|EEE93491.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/61 (63%), Positives = 49/61 (80%)
 Frame = -1

Query: 184 AKYIDHMVCLVTVMHDLLVKTKYTERTTTVPIPSDFCCPLSLELMRDPVIVASGQTYERT 5
           A++ID ++ LVT MH+ LV  K ++  + VPIP+DFCCPLSLELM DPVIVASGQTYER 
Sbjct: 207 AEFIDQIITLVTRMHERLVLIKQSQTYSPVPIPADFCCPLSLELMTDPVIVASGQTYERA 266

Query: 4   Y 2
           +
Sbjct: 267 F 267


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