BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018611
         (190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526170.1| pentatricopeptide repeat-containing protein,...    70   2e-10
gb|AAM52339.1| fertility restorer [Petunia x hybrida]                  68   9e-10
ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    65   4e-09
ref|XP_003623405.1| Pentatricopeptide repeat-containing protein ...    65   4e-09
gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]     65   6e-09

>ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534547|gb|EEF36246.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 28/63 (44%), Positives = 47/63 (74%)
 Frame = -1

Query: 190 LPNTITYTAMINGFCQEGMLIDAQSLFIEMEENSVAPNDRTFNIMVQGFLKGRNFEKAVQ 11
           +PN +TY  MING C+EG L++A+ LF++MEE+    ++ +FN +++GFL+    +KA++
Sbjct: 391 VPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAME 450

Query: 10  FLK 2
           FLK
Sbjct: 451 FLK 453


>gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/62 (45%), Positives = 45/62 (72%)
 Frame = -1

Query: 187 PNTITYTAMINGFCQEGMLIDAQSLFIEMEENSVAPNDRTFNIMVQGFLKGRNFEKAVQF 8
           P+ ITYTAMI+G+CQEG+L +A+ +  +ME+N   P++RT+N++V+GF +     +   F
Sbjct: 491 PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAF 550

Query: 7   LK 2
           LK
Sbjct: 551 LK 552


>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/62 (45%), Positives = 42/62 (67%)
 Frame = -1

Query: 187 PNTITYTAMINGFCQEGMLIDAQSLFIEMEENSVAPNDRTFNIMVQGFLKGRNFEKAVQF 8
           P+  TYT MING CQ+G+L +A  LF EM+EN  +PN  T+N++ +GFL+     +A+Q 
Sbjct: 472 PDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQL 531

Query: 7   LK 2
            +
Sbjct: 532 FQ 533


>ref|XP_003623405.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498420|gb|AES79623.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 737

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 25/61 (40%), Positives = 43/61 (70%)
 Frame = -1

Query: 187 PNTITYTAMINGFCQEGMLIDAQSLFIEMEENSVAPNDRTFNIMVQGFLKGRNFEKAVQF 8
           PN ++YT +ING+C  G + DA  +F EM E+ + PN  T++++++GFL+GR+FE   + 
Sbjct: 143 PNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGREL 202

Query: 7   L 5
           +
Sbjct: 203 M 203


>gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/62 (43%), Positives = 45/62 (72%)
 Frame = -1

Query: 187 PNTITYTAMINGFCQEGMLIDAQSLFIEMEENSVAPNDRTFNIMVQGFLKGRNFEKAVQF 8
           P+ ITYTAMI+G+CQEG+L +A+ +  +ME+N    ++RT+N++V+GFL+     +   F
Sbjct: 491 PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAF 550

Query: 7   LK 2
           L+
Sbjct: 551 LE 552