BLASTX nr result

ID: Coptis24_contig00018608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018608
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75692.1| hypothetical protein VITISV_038533 [Vitis vinifera]    73   3e-11
ref|XP_002281457.1| PREDICTED: probable methyltransferase PMT28 ...    69   4e-10
ref|XP_002510383.1| ATP binding protein, putative [Ricinus commu...    65   6e-09
ref|XP_003549433.1| PREDICTED: probable methyltransferase PMT28-...    61   8e-08
ref|XP_003544411.1| PREDICTED: probable methyltransferase PMT28-...    61   8e-08

>emb|CAN75692.1| hypothetical protein VITISV_038533 [Vitis vinifera]
          Length = 1762

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/64 (59%), Positives = 46/64 (71%)
 Frame = -3

Query: 192 YWS*LEMAITSRIARFSRQVKRLYGLCVKMLAVTILGLCFIFMLSTFFPSWSSLNSQRSS 13
           +WS  EMA+    ARF RQ KR YG+CVKM AV +LG+CFIF+ S F  S S++ SQRSS
Sbjct: 521 HWSLWEMAL----ARFGRQAKRPYGVCVKMTAVAVLGMCFIFVWSMFSASPSAVTSQRSS 576

Query: 12  FSDI 1
           F DI
Sbjct: 577 FGDI 580


>ref|XP_002281457.1| PREDICTED: probable methyltransferase PMT28 [Vitis vinifera]
           gi|302142491|emb|CBI19694.3| unnamed protein product
           [Vitis vinifera]
          Length = 724

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/52 (63%), Positives = 40/52 (76%)
 Frame = -3

Query: 156 IARFSRQVKRLYGLCVKMLAVTILGLCFIFMLSTFFPSWSSLNSQRSSFSDI 1
           +ARF RQ KR YG+CVKM AV +LG+CFIF+ S F  S S++ SQRSSF DI
Sbjct: 3   LARFGRQAKRPYGVCVKMTAVAVLGMCFIFVWSMFSASPSAVTSQRSSFGDI 54


>ref|XP_002510383.1| ATP binding protein, putative [Ricinus communis]
           gi|223551084|gb|EEF52570.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 735

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/52 (59%), Positives = 37/52 (71%)
 Frame = -3

Query: 156 IARFSRQVKRLYGLCVKMLAVTILGLCFIFMLSTFFPSWSSLNSQRSSFSDI 1
           IARF+R  KR YG C KM AV ++GLCFIF+ S F  S SS+ +QR SF DI
Sbjct: 3   IARFARHAKRPYGFCAKMTAVAVMGLCFIFVWSLFSASSSSVTTQRESFDDI 54


>ref|XP_003549433.1| PREDICTED: probable methyltransferase PMT28-like [Glycine max]
          Length = 699

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = -3

Query: 156 IARFSRQVKRLYGLCVKMLAVTILGLCFIFMLSTFFPSWSSLNSQRSSFSDI 1
           IAR  RQ KR +GL VKM AVTILGLCFIF+   F  S +S+ +QR SF DI
Sbjct: 3   IARLVRQAKRPHGLWVKMTAVTILGLCFIFVWGVFSSSSTSVTTQRESFEDI 54


>ref|XP_003544411.1| PREDICTED: probable methyltransferase PMT28-like [Glycine max]
          Length = 711

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = -3

Query: 156 IARFSRQVKRLYGLCVKMLAVTILGLCFIFMLSTFFPSWSSLNSQRSSFSDI 1
           IAR  RQ KR +GL VKM AVTILGLCFIF+   F  S +S+ +QR SF DI
Sbjct: 3   IARLVRQAKRPHGLWVKMTAVTILGLCFIFVWGVFSSSSTSVTTQRESFEDI 54


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