BLASTX nr result

ID: Coptis24_contig00018604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018604
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236413.1| uncharacterized protein LOC100526951 precurs...   112   7e-23
ref|NP_001239759.1| uncharacterized protein LOC100782360 precurs...   105   6e-21
ref|XP_002307862.1| predicted protein [Populus trichocarpa] gi|2...   102   9e-20
emb|CAN62855.1| hypothetical protein VITISV_011346 [Vitis vinifera]    82   1e-13
ref|XP_002510146.1| conserved hypothetical protein [Ricinus comm...    77   2e-12

>ref|NP_001236413.1| uncharacterized protein LOC100526951 precursor [Glycine max]
           gi|255631234|gb|ACU15984.1| unknown [Glycine max]
          Length = 135

 Score =  112 bits (280), Expect = 7e-23
 Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
 Frame = +2

Query: 170 LGGIKDSGPSAGGGHKFTDDNTLGGIKVSGPSPRGKGHDYTNVQSLGGIKGS-INKSGDG 346
           LG +KDSGPS G GHKFT+  TLGGIK SGPSP GKGH +TN ++LGGIK S ++  G+G
Sbjct: 53  LGAMKDSGPSPGVGHKFTNSETLGGIKDSGPSPGGKGHQFTNSETLGGIKNSGLSVGGEG 112

Query: 347 HSLIDIQIFGGIKDSGPSPGQGH 415
           H   + +  G IKDSGPSPGQGH
Sbjct: 113 HKFTNSETLGEIKDSGPSPGQGH 135


>ref|NP_001239759.1| uncharacterized protein LOC100782360 precursor [Glycine max]
           gi|255640582|gb|ACU20576.1| unknown [Glycine max]
          Length = 132

 Score =  105 bits (263), Expect = 6e-21
 Identities = 51/84 (60%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = +2

Query: 167 TLGGIKDSGPSAGGGHKFTDDNTLGGIKVSGPSPRGKGHDYTNVQSLGGIKGS-INKSGD 343
           +LG +KDSGPS G GHKFT+  TLGGIK SGPS  G GH +TN Q+LGGIK S  +  G+
Sbjct: 49  SLGAMKDSGPSPGVGHKFTNSETLGGIKDSGPSSGGPGHQFTNSQTLGGIKNSGPSPGGE 108

Query: 344 GHSLIDIQIFGGIKDSGPSPGQGH 415
           GH   + +  G +KDSGPSPGQGH
Sbjct: 109 GHKFTNSETLGEMKDSGPSPGQGH 132


>ref|XP_002307862.1| predicted protein [Populus trichocarpa] gi|222853838|gb|EEE91385.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score =  102 bits (253), Expect = 9e-20
 Identities = 66/139 (47%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
 Frame = +2

Query: 38  LGMKNSGPSPGGRGHNFVNAQTLXXXXXXXXXXXXX--------HQFTNAQTLGGIKDSG 193
           LG    GPSPG  GH F N++TL                     H FTN+ TLGGIK+ G
Sbjct: 234 LGGIKEGPSPGA-GHGFTNSETLGGIKEGPSPGGIKEGSSPGVGHAFTNSGTLGGIKE-G 291

Query: 194 PSAGGGHKFTDDNTLGGIKVSGPSPRGKGHDYTNVQSLGGIKGSINKSGDGHSLIDIQIF 373
           PS G GH FT+  TLGGIK  GPSP G GH +TN  +LGGIK   +  G GH   +    
Sbjct: 292 PSPGAGHAFTNSGTLGGIK-EGPSP-GAGHGFTNSGTLGGIKEG-SSPGVGHGFTNSGTL 348

Query: 374 GGIKDSGPSPGQGHNYITG 430
           GGIK+ GPSP  G+ Y TG
Sbjct: 349 GGIKE-GPSPCCGNKYTTG 366



 Score =  100 bits (250), Expect = 2e-19
 Identities = 66/150 (44%), Positives = 80/150 (53%), Gaps = 22/150 (14%)
 Frame = +2

Query: 38  LGMKNSGPSPGGRGHNFVNAQTLXXXXXXXXXXXXXHQFTNAQTLGGIKDSGPSAGGGHK 217
           LG    GPSPG  GH F N++TL             H+FTN+ TLGGIK+ GPS G GH 
Sbjct: 155 LGGIKEGPSPGA-GHGFTNSETLGGIKEGPSPGVG-HEFTNSGTLGGIKE-GPSPGVGHG 211

Query: 218 FTDDNTLGGIKVSGPSPR--------------GKGHDYTNVQSLGGIK-----GSINKS- 337
           FT+  TL GIK  GPSP               G GH +TN ++LGGIK     G I +  
Sbjct: 212 FTNSGTLEGIKKEGPSPTNSGTLGGIKEGPSPGAGHGFTNSETLGGIKEGPSPGGIKEGS 271

Query: 338 --GDGHSLIDIQIFGGIKDSGPSPGQGHNY 421
             G GH+  +    GGIK+ GPSPG GH +
Sbjct: 272 SPGVGHAFTNSGTLGGIKE-GPSPGAGHAF 300



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 66/174 (37%), Positives = 80/174 (45%), Gaps = 34/174 (19%)
 Frame = +2

Query: 2   SGGIDAFYGFSILGMKNSGPSPGGRGHNFVNAQTLXXXXXXXXXXXXXHQFTNAQTLGGI 181
           S G ++F+    LG    GPSPG  GH F N+ TL             H FT++ TLGGI
Sbjct: 42  SRGTESFFDGLSLGGIKEGPSPGA-GHEFTNSGTLGGIKEEGPSPSAGHGFTSSGTLGGI 100

Query: 182 KDS--------------------GPSAGGGHKFTDDNTLGGIKVSGPSPR---------- 271
           K+                     GPS G GH FT+  TL GIK  GPSP           
Sbjct: 101 KEGPSPGAGHGFTNSGTLGGIKEGPSPGVGHGFTNSGTLEGIKKEGPSPTNSGTLGGIKE 160

Query: 272 ----GKGHDYTNVQSLGGIKGSINKSGDGHSLIDIQIFGGIKDSGPSPGQGHNY 421
               G GH +TN ++LGGIK      G GH   +    GGIK+ GPSPG GH +
Sbjct: 161 GPSPGAGHGFTNSETLGGIKEG-PSPGVGHEFTNSGTLGGIKE-GPSPGVGHGF 212


>emb|CAN62855.1| hypothetical protein VITISV_011346 [Vitis vinifera]
          Length = 231

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 41/70 (58%), Positives = 48/70 (68%)
 Frame = +2

Query: 152 FTNAQTLGGIKDSGPSAGGGHKFTDDNTLGGIKVSGPSPRGKGHDYTNVQSLGGIKGSIN 331
           F +  +LG IK SGPS G GHKFT+  TLGGIK SGPSP G GH +TN  +LGGIK S  
Sbjct: 44  FFDGLSLGAIKQSGPSPGNGHKFTNAGTLGGIKDSGPSP-GNGHKFTNAGTLGGIKDSGP 102

Query: 332 KSGDGHSLID 361
             G+GH  +D
Sbjct: 103 NPGEGHKELD 112



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 48/106 (45%), Positives = 57/106 (53%)
 Frame = +2

Query: 20  FYGFSILGMKNSGPSPGGRGHNFVNAQTLXXXXXXXXXXXXXHQFTNAQTLGGIKDSGPS 199
           F G S+  +K SGPSPG                         H+FTNA TLGGIKDSGPS
Sbjct: 45  FDGLSLGAIKQSGPSPGN-----------------------GHKFTNAGTLGGIKDSGPS 81

Query: 200 AGGGHKFTDDNTLGGIKVSGPSPRGKGHDYTNVQSLGGIKGSINKS 337
            G GHKFT+  TLGGIK SGP+P G+GH   + + +      I KS
Sbjct: 82  PGNGHKFTNAGTLGGIKDSGPNP-GEGHKELDDEWVSSFAKKIRKS 126



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 40/78 (51%), Positives = 47/78 (60%)
 Frame = +2

Query: 182 KDSGPSAGGGHKFTDDNTLGGIKVSGPSPRGKGHDYTNVQSLGGIKGSINKSGDGHSLID 361
           K  GP       F D  +LG IK SGPSP G GH +TN  +LGGIK S    G+GH   +
Sbjct: 32  KPRGPDGEEMRGFFDGLSLGAIKQSGPSP-GNGHKFTNAGTLGGIKDSGPSPGNGHKFTN 90

Query: 362 IQIFGGIKDSGPSPGQGH 415
               GGIKDSGP+PG+GH
Sbjct: 91  AGTLGGIKDSGPNPGEGH 108


>ref|XP_002510146.1| conserved hypothetical protein [Ricinus communis]
           gi|223550847|gb|EEF52333.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 152

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 52/126 (41%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
 Frame = +2

Query: 50  NSGPSPGGRGHNFVNAQTLXXXXXXXXXXXXXHQFTNAQTLGGIKDSGPSAGGGHKFT-- 223
           + GPSPGGRGH ++NAQT                       GGIK SGP+ G G+ +T  
Sbjct: 44  SEGPSPGGRGHKYINAQTT----------------------GGIKHSGPAPGVGNYYTTK 81

Query: 224 DDNTLGGIKVSGPSPRGKGHDYTNVQS---LGGIK---GSINKSGDGHSLIDIQIFGGIK 385
              TLGGIK SGPS  G+G+ +T       LGGIK    S    G+ ++    Q  GG+K
Sbjct: 82  TPQTLGGIKHSGPSHGGEGNHHTTSTPRVFLGGIKHSGPSHGGQGNYYTTSAPQTLGGLK 141

Query: 386 DSGPSP 403
            SGPSP
Sbjct: 142 HSGPSP 147



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
 Frame = +2

Query: 41  GMKNSGPSPGGRGHNFVNAQTLXXXXXXXXXXXXXHQFTNAQTLGGIKDSGPSAGGGHKF 220
           G+K+SGP+PG    N+   +T                    QTLGGIK SGPS GG    
Sbjct: 64  GIKHSGPAPG--VGNYYTTKT-------------------PQTLGGIKHSGPSHGGEGNH 102

Query: 221 TDDNT----LGGIKVSGPSPRGKGHDYTN--VQSLGGIKGS 325
              +T    LGGIK SGPS  G+G+ YT    Q+LGG+K S
Sbjct: 103 HTTSTPRVFLGGIKHSGPSHGGQGNYYTTSAPQTLGGLKHS 143


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