BLASTX nr result

ID: Coptis24_contig00018602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018602
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    65   7e-14
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    64   4e-08
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    62   2e-07
emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   3e-06

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 65.1 bits (157), Expect(2) = 7e-14
 Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 1/146 (0%)
 Frame = -2

Query: 855 PKCAGTTWKLLKNCAATDFKVQGKGINLASRCVVCKTSGEDLQHLLWDCRLAIGFWSWFA 676
           P  +  TW+LL N   TD  ++ +G  + S C  C  S E  QH+ ++C +    W W  
Sbjct: 47  PSRSFITWRLLHNKLPTDENLRKRGCLIVSICCFCMKSAESSQHIFFECHVTSRLWDWLG 106

Query: 675 G*CKSRMNFSNFTE-AISKMKNRSPLAKQIWGAAVVGGMVALWRHRNQVVYEDKPPTIQH 499
                 ++ S+  +  I    + S L   I  +A++  + ++W  RNQ  + +K   +  
Sbjct: 107 KGTDKLLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTIWSIWIERNQRCFHNKHQAMTT 166

Query: 498 CKNYVRAQIRYAIQLSKAKCYSSSED 421
             N + A+++ +  L   K  S+ +D
Sbjct: 167 LFNIILAEVKMSFSLCMIKGNSAMQD 192



 Score = 38.5 bits (88), Expect(2) = 7e-14
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
 Frame = -3

Query: 419 LLRLTLMGAAIGNPGPSGYGIAVRNHQGGFLKVICKNLGCNTNY*AESITLVEAMELAAA 240
           ++++   G+++G       GI +R+    FL  I  N+G  T   AE    + AME A  
Sbjct: 223 IVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQE 282

Query: 239 ERWHNVWIESDAAAVVTA-AKEESMHWKRKGRFE 141
            +  +V +E+D+  VV A  K   + W+ + R++
Sbjct: 283 MQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQ 316


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
 Frame = -2

Query: 837 TWKLLKNCAATDFKVQGKGINLASRCVVCKTSGEDLQHLLWDCRLAIGFWSWFAG*CKSR 658
           TW+L+ +   TD K+Q +G  L S C +C T  E   HL ++C  A   W WFA    S 
Sbjct: 129 TWRLIHDKVPTDEKLQQRGCQLPSMCSLCGTHVETSFHLFFECCFAFRIWCWFASVLDSS 188

Query: 657 MNFSNFTEAISKM-KNRSPLAKQIWGAAVVGGMVALWRHRNQ 535
           ++F +  +  S   +  SP  K +  A +V  +  +W +RNQ
Sbjct: 189 LHFQSIPDIWSVCDRGWSPQCKVVNQATIVNIISTIWYNRNQ 230


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
 Frame = -2

Query: 855 PKCAGTTWKLLKNCAATDFKVQGKGINLASRCVVCKTSGEDLQHLLWDCRLAIGFWS--- 685
           PK     W+  +NC  T  ++Q KG+    RC VC   GED  HL + C  ++ +W    
Sbjct: 376 PKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCSKSMLYWQRIG 435

Query: 684 -WFAG*CKSRMNFSNFTEAISKMKNRSPLAKQIWGAAVVGGMVALWRHRNQVVYEDKPPT 508
            W        +N S  T   + +++     KQI+       + ++W+HRN  V+ +   T
Sbjct: 436 LWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIFSVT----LWSIWKHRNNKVWNNITDT 491

Query: 507 IQ 502
            Q
Sbjct: 492 AQ 493


>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
 Frame = -2

Query: 762  CVVCKTSGEDLQHLLWDCRLAIGFWSWFAG*CKSRMNFS-NFTEAISKM--KNRSPLAKQ 592
            C +C T  E  +HLL  C +A   WSW+ G  + +  F  +  EA ++      SP  K+
Sbjct: 1090 CPLCMTEPETAEHLLLHCPVASQIWSWWIGLWRIKWAFPLSLREAFTQWFWPKNSPFFKK 1149

Query: 591  IWGAAVVGGMVALWRHRNQVVYEDKPPTIQHCKNYVRAQIRYAI 460
            +W A     +  LW+ RNQ ++ + P T++  K+ V  ++ + I
Sbjct: 1150 VWSAVFFIIVWTLWKERNQRIFSNNPSTVKVLKDMVLMRLGWWI 1193


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