BLASTX nr result
ID: Coptis24_contig00018593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00018593
(1227 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512121.1| DNA binding protein, putative [Ricinus commu... 328 e-110
ref|XP_002274826.1| PREDICTED: uncharacterized protein LOC100266... 322 e-107
emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera] 320 e-107
ref|XP_003518753.1| PREDICTED: uncharacterized protein LOC100794... 318 e-105
ref|XP_003516316.1| PREDICTED: uncharacterized protein LOC100783... 317 e-103
>ref|XP_002512121.1| DNA binding protein, putative [Ricinus communis]
gi|223549301|gb|EEF50790.1| DNA binding protein,
putative [Ricinus communis]
Length = 336
Score = 328 bits (841), Expect(2) = e-110
Identities = 160/212 (75%), Positives = 179/212 (84%)
Frame = -3
Query: 994 AQQLRNKLAEVEAEVIRQQDTKRGSTAKSEAQDKAISILRLRTDMQKAIENENYALAAEL 815
AQQLRNKL EVEAEVIRQQ+ KRGS++KSEAQDKA+SI+RLR D+Q AIENENYA+AA+L
Sbjct: 120 AQQLRNKLTEVEAEVIRQQEAKRGSSSKSEAQDKALSIIRLRADLQNAIENENYAMAAQL 179
Query: 814 RDKITXXXXXXXXXXXXXXAYENVQYAFRLGQKVRHKVFGYRAVVCGMDPVCCESSSWME 635
RD+I+ AYEN QYAFRLGQKV HK FGY+AVVCGMDPVCCESSSWME
Sbjct: 180 RDQISKLEAESLAASVNALAYENAQYAFRLGQKVTHKTFGYQAVVCGMDPVCCESSSWME 239
Query: 634 SAQVDKLTRGSNQPFYQALVDVYADSNLLVTYVPEENLLTPDQPDKERFDHPYTSFLFYG 455
+AQV+KL+RGSNQPFYQ LVDV+AD NLLV YV EENL+ P+QPD RFDHPY SFLFYG
Sbjct: 240 TAQVEKLSRGSNQPFYQVLVDVHADPNLLVAYVAEENLVAPEQPDLGRFDHPYVSFLFYG 299
Query: 454 MDTAGDFIPIKQLREKYSKPRHEVPADSQDED 359
DTAGDFIPIKQLREKY++PRHEVP D DED
Sbjct: 300 TDTAGDFIPIKQLREKYNRPRHEVPFDPPDED 331
Score = 97.4 bits (241), Expect(2) = e-110
Identities = 45/60 (75%), Positives = 55/60 (91%)
Frame = -2
Query: 1226 KVQAGWLFNKGGDRGMDASAEKSESANEDIVVFFFQLDLATRVQCALNMEEYDIAQQLRN 1047
+V+AGWLFN+GG++ +AS E+SESANEDI++FFFQLDLATRVQ ALN E+YDIAQQLRN
Sbjct: 66 RVEAGWLFNRGGNQESEASCERSESANEDILIFFFQLDLATRVQYALNTEQYDIAQQLRN 125
>ref|XP_002274826.1| PREDICTED: uncharacterized protein LOC100266199 [Vitis vinifera]
gi|297738051|emb|CBI27252.3| unnamed protein product
[Vitis vinifera]
Length = 340
Score = 322 bits (824), Expect(2) = e-107
Identities = 158/217 (72%), Positives = 177/217 (81%), Gaps = 2/217 (0%)
Frame = -3
Query: 994 AQQLRNKLAEVEAEVIRQQDTKRGSTAKSEAQDKAISILRLRTDMQKAIENENYALAAEL 815
AQQLR+KL EVEAEV++Q++ KRGST+KSEAQDKA+S++RLR D+QKAIE ENYALAAEL
Sbjct: 123 AQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMIRLRADLQKAIEAENYALAAEL 182
Query: 814 RDKITXXXXXXXXXXXXXXAYENVQYAFRLGQKVRHKVFGYRAVVCGMDPVCCESSSWME 635
RD+I YEN YAFRLGQKVRHKVFGY AV+CGMDPVCCESSSW E
Sbjct: 183 RDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVFGYSAVICGMDPVCCESSSWRE 242
Query: 634 SAQVDKLTRGSNQPFYQALVDVYADSNLLVTYVPEENLLTPD--QPDKERFDHPYTSFLF 461
SA VDKLTRGSNQPFYQ LVDV+ D NLLV YVPEENLL PD +P+K RFDHPY SFLF
Sbjct: 243 SAHVDKLTRGSNQPFYQVLVDVHVDPNLLVAYVPEENLLVPDGPRPNKGRFDHPYLSFLF 302
Query: 460 YGMDTAGDFIPIKQLREKYSKPRHEVPADSQDEDGKE 350
YGMD AGDFIPIKQLREKY++PRHEVP D E G++
Sbjct: 303 YGMDAAGDFIPIKQLREKYNRPRHEVPGDPPGEGGED 339
Score = 96.3 bits (238), Expect(2) = e-107
Identities = 45/60 (75%), Positives = 55/60 (91%)
Frame = -2
Query: 1226 KVQAGWLFNKGGDRGMDASAEKSESANEDIVVFFFQLDLATRVQCALNMEEYDIAQQLRN 1047
+V+AGWLF GGD+G+DAS+E SESANEDI++FFFQLDLATRVQ ALN E+Y+IAQQLR+
Sbjct: 69 RVEAGWLFKGGGDQGLDASSECSESANEDILIFFFQLDLATRVQYALNTEQYEIAQQLRD 128
>emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 320 bits (819), Expect(2) = e-107
Identities = 159/219 (72%), Positives = 176/219 (80%), Gaps = 2/219 (0%)
Frame = -3
Query: 994 AQQLRNKLAEVEAEVIRQQDTKRGSTAKSEAQDKAISILRLRTDMQKAIENENYALAAEL 815
AQQLR+KL EVEAEV++Q++ KRGST+KSEAQDKA+S++RLR D+QKAIE ENYALAAEL
Sbjct: 123 AQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMIRLRADLQKAIEAENYALAAEL 182
Query: 814 RDKITXXXXXXXXXXXXXXAYENVQYAFRLGQKVRHKVFGYRAVVCGMDPVCCESSSWME 635
RD+I YEN YAFRLGQKVRHKVFGY AV+CGMDPVCCESSSW E
Sbjct: 183 RDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVFGYSAVICGMDPVCCESSSWRE 242
Query: 634 SAQVDKLTRGSNQPFYQALVDVYADSNLLVTYVPEENLLTPD--QPDKERFDHPYTSFLF 461
SA VDKLTRGSNQPFYQ LVDV+ D NLLV YVPEENLL PD +P+K RFDHPY SFLF
Sbjct: 243 SAHVDKLTRGSNQPFYQVLVDVHVDPNLLVAYVPEENLLVPDGPRPNKGRFDHPYLSFLF 302
Query: 460 YGMDTAGDFIPIKQLREKYSKPRHEVPADSQDEDGKEGA 344
YGMD AGDFIPIKQLREKY++PRHEVP D E E A
Sbjct: 303 YGMDAAGDFIPIKQLREKYNRPRHEVPGDPPGEASAEYA 341
Score = 96.3 bits (238), Expect(2) = e-107
Identities = 45/60 (75%), Positives = 55/60 (91%)
Frame = -2
Query: 1226 KVQAGWLFNKGGDRGMDASAEKSESANEDIVVFFFQLDLATRVQCALNMEEYDIAQQLRN 1047
+V+AGWLF GGD+G+DAS+E SESANEDI++FFFQLDLATRVQ ALN E+Y+IAQQLR+
Sbjct: 69 RVEAGWLFKGGGDQGLDASSECSESANEDILIFFFQLDLATRVQYALNTEQYEIAQQLRD 128
>ref|XP_003518753.1| PREDICTED: uncharacterized protein LOC100794023 [Glycine max]
Length = 327
Score = 318 bits (816), Expect(2) = e-105
Identities = 156/212 (73%), Positives = 180/212 (84%)
Frame = -3
Query: 994 AQQLRNKLAEVEAEVIRQQDTKRGSTAKSEAQDKAISILRLRTDMQKAIENENYALAAEL 815
A+QLRNKLAEVE EVI+QQ +KRG ++K EAQDKAISI+RLR+D+QKAIENE+YALAAEL
Sbjct: 116 AKQLRNKLAEVEEEVIKQQQSKRGLSSKGEAQDKAISIIRLRSDLQKAIENEDYALAAEL 175
Query: 814 RDKITXXXXXXXXXXXXXXAYENVQYAFRLGQKVRHKVFGYRAVVCGMDPVCCESSSWME 635
RD+I+ A+EN QYAFRLGQKVRHK FGYRAV+CGMDPVC ESSSWME
Sbjct: 176 RDEISKLEAESLAASATALAHENAQYAFRLGQKVRHKKFGYRAVICGMDPVCSESSSWME 235
Query: 634 SAQVDKLTRGSNQPFYQALVDVYADSNLLVTYVPEENLLTPDQPDKERFDHPYTSFLFYG 455
+AQV KL+RGS QPFYQ LVDV+A+ NLLV YVPEENLLTPD+PD RFDHPY SFLFYG
Sbjct: 236 NAQVKKLSRGSAQPFYQVLVDVHAEPNLLVAYVPEENLLTPDKPDTGRFDHPYISFLFYG 295
Query: 454 MDTAGDFIPIKQLREKYSKPRHEVPADSQDED 359
MD+AGDFIPIKQLREKY+KPRHE+P D +++
Sbjct: 296 MDSAGDFIPIKQLREKYNKPRHEIPIDPPNDE 327
Score = 91.3 bits (225), Expect(2) = e-105
Identities = 43/60 (71%), Positives = 55/60 (91%)
Frame = -2
Query: 1226 KVQAGWLFNKGGDRGMDASAEKSESANEDIVVFFFQLDLATRVQCALNMEEYDIAQQLRN 1047
+ +A W+F +GG++G+DAS+E SESANEDI++FFFQLDLATRVQ ALNME+YDIA+QLRN
Sbjct: 63 RAEAAWMF-RGGEQGLDASSEHSESANEDILMFFFQLDLATRVQYALNMEQYDIAKQLRN 121
>ref|XP_003516316.1| PREDICTED: uncharacterized protein LOC100783767 [Glycine max]
Length = 303
Score = 317 bits (813), Expect(2) = e-103
Identities = 155/212 (73%), Positives = 180/212 (84%)
Frame = -3
Query: 994 AQQLRNKLAEVEAEVIRQQDTKRGSTAKSEAQDKAISILRLRTDMQKAIENENYALAAEL 815
A+QLRNKLAEVE EVI+QQ +KRG ++KSEAQDKAISI+RL +D+Q AIENE+YALAAEL
Sbjct: 92 AKQLRNKLAEVEEEVIKQQQSKRGLSSKSEAQDKAISIIRLHSDLQNAIENEHYALAAEL 151
Query: 814 RDKITXXXXXXXXXXXXXXAYENVQYAFRLGQKVRHKVFGYRAVVCGMDPVCCESSSWME 635
RD+I+ A+EN QYAFRLGQKVRHK FGY+AV+CGMDPVC ESSSWME
Sbjct: 152 RDEISKLEAESLAASAKALAHENAQYAFRLGQKVRHKKFGYKAVICGMDPVCSESSSWME 211
Query: 634 SAQVDKLTRGSNQPFYQALVDVYADSNLLVTYVPEENLLTPDQPDKERFDHPYTSFLFYG 455
+AQV KL+RGS QPFYQ LVDV+A+ NLLV YVPEENLLTPD+PDK RFDHPY SFLFYG
Sbjct: 212 NAQVKKLSRGSAQPFYQVLVDVHAEPNLLVAYVPEENLLTPDKPDKGRFDHPYISFLFYG 271
Query: 454 MDTAGDFIPIKQLREKYSKPRHEVPADSQDED 359
MD+AGDFIPIKQLREKY+KPRHE+P D +++
Sbjct: 272 MDSAGDFIPIKQLREKYNKPRHEIPIDPPNDE 303
Score = 85.1 bits (209), Expect(2) = e-103
Identities = 42/61 (68%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = -2
Query: 1226 KVQAGWLFNKGGDRGMDASAEKSESANEDIVVFFF-QLDLATRVQCALNMEEYDIAQQLR 1050
+ +A W+F +GG++G+D S+E SESANEDI++FFF QLDLATRVQ ALNME+YDIA+QLR
Sbjct: 38 RAEAAWMF-RGGEQGLDVSSEHSESANEDILMFFFFQLDLATRVQYALNMEQYDIAKQLR 96
Query: 1049 N 1047
N
Sbjct: 97 N 97