BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018592
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...    75   4e-12
ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]...    71   8e-11
ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]         69   4e-10
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]      67   1e-09
ref|XP_002332677.1| PAF complex protein [Populus trichocarpa] gi...    65   6e-09

>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
           gi|449513423|ref|XP_004164322.1| PREDICTED:
           parafibromin-like [Cucumis sativus]
          Length = 407

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/51 (76%), Positives = 40/51 (78%), Gaps = 7/51 (13%)
 Frame = -2

Query: 133 DGLVAKSRLMGSD-------GDDLGYDMAPKPKMNFKGSKIGEGVPIILVP 2
           DGLVAKSRLMGSD       GDDLGYD  PKPKM+ KG KIGEGVPIILVP
Sbjct: 200 DGLVAKSRLMGSDDRGLVGYGDDLGYDANPKPKMHLKGGKIGEGVPIILVP 250


>ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]
           gi|222864802|gb|EEF01933.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 405

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 7/51 (13%)
 Frame = -2

Query: 133 DGLVAKSRLMGSD-------GDDLGYDMAPKPKMNFKGSKIGEGVPIILVP 2
           DGLVAKSRLMG+D       GD+LGYD A KPKM+ KG KIGEGVPIILVP
Sbjct: 198 DGLVAKSRLMGTDERGIGYGGDELGYDSAAKPKMHSKGGKIGEGVPIILVP 248


>ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]
          Length = 389

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 7/51 (13%)
 Frame = -2

Query: 133 DGLVAKSRLMGSD------GDDLG-YDMAPKPKMNFKGSKIGEGVPIILVP 2
           DGLVAKSRLMGSD       DD+G YD  PKPKM+ KG+KIGEGVPIILVP
Sbjct: 184 DGLVAKSRLMGSDDRGLGFSDDMGGYDPTPKPKMHLKGTKIGEGVPIILVP 234


>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/53 (67%), Positives = 38/53 (71%), Gaps = 9/53 (16%)
 Frame = -2

Query: 133 DGLVAKSRLMGSD---------GDDLGYDMAPKPKMNFKGSKIGEGVPIILVP 2
           DGLVAKSRLMG+D         GD+LGYD  PKPKM    SKIGEGVPIILVP
Sbjct: 206 DGLVAKSRLMGADERGLGFWKDGDELGYDGTPKPKMLLNRSKIGEGVPIILVP 258


>ref|XP_002332677.1| PAF complex protein [Populus trichocarpa]
           gi|222836471|gb|EEE74878.1| PAF complex protein [Populus
           trichocarpa]
          Length = 256

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 7/51 (13%)
 Frame = -2

Query: 133 DGLVAKSRLMGSD-------GDDLGYDMAPKPKMNFKGSKIGEGVPIILVP 2
           DGLVAKSRLMG+D       GD+LGYD A KPKM+ KG KI EGV IILVP
Sbjct: 49  DGLVAKSRLMGADERGIGCGGDELGYDSAAKPKMHLKGRKIREGVHIILVP 99