BLASTX nr result

ID: Coptis24_contig00018591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018591
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]      62   5e-08
ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...    62   6e-08

>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/90 (44%), Positives = 47/90 (52%), Gaps = 27/90 (30%)
 Frame = +3

Query: 42  LPDRKPLLEYLQGKVLSNDAIQFVVPQNP----------------NPVF-------REEE 152
           LPDRKPLLEYLQGKV S DAI+FVVPQNP                +P           E+
Sbjct: 83  LPDRKPLLEYLQGKVASTDAIEFVVPQNPKIPDIGVDAVDEYRPEDPTLLAIRDPPGSED 142

Query: 153 KLEVSE----SVADYVLKIKGMERPLRDRE 230
            L+ S        DY+  I+  ERPL+DRE
Sbjct: 143 ALDNSRVRGFDNVDYISMIRASERPLKDRE 172


>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
           gi|449513423|ref|XP_004164322.1| PREDICTED:
           parafibromin-like [Cucumis sativus]
          Length = 407

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 21/83 (25%)
 Frame = +3

Query: 45  PDRKPLLEYLQGKVLSNDAIQFVVPQNPN-------PVFREEEKLEVSESV--------- 176
           PDRKPLL+YL GKV S+DAI+F+VPQNP          +R E+ + V  ++         
Sbjct: 84  PDRKPLLDYLTGKVSSSDAIEFLVPQNPKFPDLPSVDEYRPEDPVIVGAAMDAVDEDDGF 143

Query: 177 -----ADYVLKIKGMERPLRDRE 230
                 DY+  I+ +ERPL+DRE
Sbjct: 144 KDSTNVDYMTMIRAIERPLKDRE 166


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