BLASTX nr result
ID: Coptis24_contig00018591
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018591 (247 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera] 62 5e-08 ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu... 62 6e-08 >ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera] Length = 413 Score = 62.0 bits (149), Expect = 5e-08 Identities = 40/90 (44%), Positives = 47/90 (52%), Gaps = 27/90 (30%) Frame = +3 Query: 42 LPDRKPLLEYLQGKVLSNDAIQFVVPQNP----------------NPVF-------REEE 152 LPDRKPLLEYLQGKV S DAI+FVVPQNP +P E+ Sbjct: 83 LPDRKPLLEYLQGKVASTDAIEFVVPQNPKIPDIGVDAVDEYRPEDPTLLAIRDPPGSED 142 Query: 153 KLEVSE----SVADYVLKIKGMERPLRDRE 230 L+ S DY+ I+ ERPL+DRE Sbjct: 143 ALDNSRVRGFDNVDYISMIRASERPLKDRE 172 >ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus] gi|449513423|ref|XP_004164322.1| PREDICTED: parafibromin-like [Cucumis sativus] Length = 407 Score = 61.6 bits (148), Expect = 6e-08 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 21/83 (25%) Frame = +3 Query: 45 PDRKPLLEYLQGKVLSNDAIQFVVPQNPN-------PVFREEEKLEVSESV--------- 176 PDRKPLL+YL GKV S+DAI+F+VPQNP +R E+ + V ++ Sbjct: 84 PDRKPLLDYLTGKVSSSDAIEFLVPQNPKFPDLPSVDEYRPEDPVIVGAAMDAVDEDDGF 143 Query: 177 -----ADYVLKIKGMERPLRDRE 230 DY+ I+ +ERPL+DRE Sbjct: 144 KDSTNVDYMTMIRAIERPLKDRE 166