BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018583
         (1238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29343.3| unnamed protein product [Vitis vinifera]              481   e-133
ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus ...   457   e-126
ref|XP_002302151.1| predicted protein [Populus trichocarpa] gi|2...   450   e-124
ref|XP_004141002.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   444   e-122
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   434   e-119

>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  481 bits (1239), Expect = e-133
 Identities = 252/420 (60%), Positives = 299/420 (71%), Gaps = 20/420 (4%)
 Frame = -2

Query: 1201 VANLQNQLKFLQNRVKELELENAKLSSQLSSCRCRKLVESVKKLNVGGVTIGSFPIKGCG 1022
            ++ LQ+QL  L+NRV+ELE ENAKLSSQ+SSC C K+ E +  +++         ++   
Sbjct: 19   ISTLQSQLLSLRNRVQELEAENAKLSSQISSCHCHKIREKLDSISL---------VQQSD 69

Query: 1021 DLRLGDAVGHEKSKDIDATKHIELIESTPGCALETTHHTSRRYVALKIMYFGPRFYGFAS 842
            +L+ G           D T+  +L    PG  + T +H S+RYVALK+MYFGPRFYGFAS
Sbjct: 70   ELKPGG----------DETRKKKLKGKIPGTNMRTMNHISKRYVALKVMYFGPRFYGFAS 119

Query: 841  -VQVEPTVESEIFKALEKTRLLVCDKKESQYTRCGRTDKGVSSVGQVISLFLRSKLE--G 671
               ++PTVESEIFKALEKT L V DKKE QY+RCGRTDKGVSSVGQVI+LFLRS L+  G
Sbjct: 120  EAHMDPTVESEIFKALEKTWLAVGDKKELQYSRCGRTDKGVSSVGQVIALFLRSNLKEIG 179

Query: 670  PRVHGDCEEISPKNICE-----------------EIDYVRVLNAVLPKDIRVIGWCPVPH 542
             R     E +  +   E                 EIDY+RVLN VLPKDIRV+GWCPVP 
Sbjct: 180  AREENSKEVVPEEQYEERREVKDEGGGDSLASEGEIDYMRVLNRVLPKDIRVMGWCPVPI 239

Query: 541  NFHARFSCLSREYKYLFWRGNLDLLAMEVAGKKFVGQHDFRNFCKMDAANVHNYRRHVTX 362
             FHARFSCLSREYKY FWRGNL++LAME AGKKFVG+HDFRNFCKMDA NVHNYRRH+  
Sbjct: 240  GFHARFSCLSREYKYFFWRGNLNILAMESAGKKFVGEHDFRNFCKMDAVNVHNYRRHIIS 299

Query: 361  XXXXXXXXXSEGDELLAMTIKGSAFLWHQIRCMVAVLFMTGHGLEVPDVIDELLDINKTP 182
                      +G++L A+ IKGSAFLWHQ+RCMVAVLFM G GLE PDV+D LLD  +T 
Sbjct: 300  FEIAPTNNRYDGNQLWAIKIKGSAFLWHQVRCMVAVLFMIGQGLESPDVVDALLDTERTS 359

Query: 181  RKPQYVMAPELPLILQSCEFEGLKFNCSPDAGQSLHEHLKNEIRYYRLQAAIFQEGLLSC 2
            RKPQY MAPE+PL+L+SCEFEGLKF CS DAGQ+L  HL+NE R Y+LQAAIF E LLSC
Sbjct: 360  RKPQYAMAPEIPLVLESCEFEGLKFICSSDAGQALRMHLENECRTYQLQAAIFHEALLSC 419


>ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223533532|gb|EEF35272.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 438

 Score =  457 bits (1175), Expect = e-126
 Identities = 244/417 (58%), Positives = 297/417 (71%), Gaps = 5/417 (1%)
 Frame = -2

Query: 1237 KECEETKSRDFQVANLQNQLKFLQNRVKELELENAKLSSQLSSCRCRKLVESVKKLNVGG 1058
            +E EE +  +  +  L++Q+  L+++VKELE ENAKLSS L++CRC +  E   KLNV  
Sbjct: 16   REEEEEEEEEEVIIKLKSQIASLKSKVKELEAENAKLSSTLANCRCNQAEE---KLNV-- 70

Query: 1057 VTIGSFPIKGCGDLRLGDAVGHEKSKDIDATKHIELIESTPGCALETTHHTSRRYVALKI 878
                              + G    K+I      + IE   G A    +H  +RYVALK+
Sbjct: 71   ------------------STGEHNIKNIKK----KTIEKNSGHATTIMNHHLKRYVALKV 108

Query: 877  MYFGPRFYGFASV-QVEPTVESEIFKALEKTRLLVCDKKESQYTRCGRTDKGVSSVGQVI 701
            MYFG RFYGF+S  Q++PTVESEIFKALE+TRLL+ DKKE QY+RCGRTDKGVS+VGQVI
Sbjct: 109  MYFGQRFYGFSSEGQMDPTVESEIFKALERTRLLIGDKKEIQYSRCGRTDKGVSAVGQVI 168

Query: 700  SLFLRSKL----EGPRVHGDCEEISPKNICEEIDYVRVLNAVLPKDIRVIGWCPVPHNFH 533
            +L LRSK+    E  +V G  E  S K+   EIDYVRVLN VLP DIR+IGWCPVP++F 
Sbjct: 169  ALLLRSKVKDIDEIGKVFG--ETASQKHSEGEIDYVRVLNRVLPNDIRIIGWCPVPNDFS 226

Query: 532  ARFSCLSREYKYLFWRGNLDLLAMEVAGKKFVGQHDFRNFCKMDAANVHNYRRHVTXXXX 353
            ARFSCLSREYKY F   NL+LLAME AGKKF+G+HDFRNFCKMDA NVHNYRR++T    
Sbjct: 227  ARFSCLSREYKYFFRGDNLNLLAMESAGKKFIGEHDFRNFCKMDAMNVHNYRRNITSFEI 286

Query: 352  XXXXXXSEGDELLAMTIKGSAFLWHQIRCMVAVLFMTGHGLEVPDVIDELLDINKTPRKP 173
                   EG++L A+ I+GSAFLWHQ+RCMVAVLFM G GLE PDVID LLD  +TPRKP
Sbjct: 287  SPCHERYEGNQLFAIKIRGSAFLWHQVRCMVAVLFMIGQGLESPDVIDVLLDTVRTPRKP 346

Query: 172  QYVMAPELPLILQSCEFEGLKFNCSPDAGQSLHEHLKNEIRYYRLQAAIFQEGLLSC 2
            QY MAPE+PL+L SC+FEGL+F CS DAG++L  HL+NE R Y+LQAAIF E + SC
Sbjct: 347  QYPMAPEIPLVLHSCDFEGLQFTCSTDAGKALRTHLENECRLYQLQAAIFHEAIFSC 403


>ref|XP_002302151.1| predicted protein [Populus trichocarpa] gi|222843877|gb|EEE81424.1|
            predicted protein [Populus trichocarpa]
          Length = 465

 Score =  450 bits (1157), Expect = e-124
 Identities = 246/425 (57%), Positives = 288/425 (67%), Gaps = 25/425 (5%)
 Frame = -2

Query: 1204 QVANLQNQLKFLQNRVKELELENAKLSSQLSSCRCRKLVESVKKLNVGGVTIGSFPIKGC 1025
            ++ NL++Q+ FLQNRV+ELE ENAK SS+LSSCRC +L E   K             +  
Sbjct: 7    EIINLRSQITFLQNRVQELEEENAKFSSRLSSCRCDELQEKKPKEKC----------ENL 56

Query: 1024 GDLRLGDAVGHEKSKDIDATKHIELIESTPGCALETTHHTSRRYVALKIMYFGPRFYGFA 845
            G+ R     G +KS    AT        TPG      +H  RRYVALK+MYFG RFYGF+
Sbjct: 57   GEERGEMNSGCKKSGRKKATP------KTPGYDTRIMNHHPRRYVALKVMYFGQRFYGFS 110

Query: 844  -SVQVEPTVESEIFKALEKTRLLVCDKKESQYTRCGRTDKGVSSVGQVISLFLRSKLEGP 668
               Q++PTVESEIFKALE TRLL+ D+KE QY+RCGRTDKGVS+VGQVI+L+LRSKL+  
Sbjct: 111  LEAQMDPTVESEIFKALETTRLLIGDRKEIQYSRCGRTDKGVSAVGQVIALYLRSKLKDI 170

Query: 667  RVH----GDCEEISPKNICEEIDYVRVLNAVLPKDIRVIGWCPVPHNFHARFSCLSREYK 500
              H    G+           EIDYVRVLN VLPKDIR++GWCPVP +F ARFSCLSREYK
Sbjct: 171  DAHNKHSGETVPEEQDGQPGEIDYVRVLNGVLPKDIRIVGWCPVPSDFSARFSCLSREYK 230

Query: 499  YLFWRGNLDLLAMEVAGKKFVGQHDFRNFCKMDAANVHNYRRHVT--------------- 365
            Y FW  NL+LL ME AGKK +G+HDFRNFCKMDA  VHNYRR+V                
Sbjct: 231  YFFWNDNLNLLVMETAGKKLIGEHDFRNFCKMDAVKVHNYRRNVMSFEISPCDMSHSSGM 290

Query: 364  -----XXXXXXXXXXSEGDELLAMTIKGSAFLWHQIRCMVAVLFMTGHGLEVPDVIDELL 200
                            EG +L A+ IKGSAFLWHQ+RCMVAVLFM G GLE P+VID LL
Sbjct: 291  GSVKWMITKPSIRTRFEGHQLYAIKIKGSAFLWHQVRCMVAVLFMIGQGLESPEVIDALL 350

Query: 199  DINKTPRKPQYVMAPELPLILQSCEFEGLKFNCSPDAGQSLHEHLKNEIRYYRLQAAIFQ 20
            D  +T RKPQY+MAPE+PL+L SCEFEGLKF+CS DAGQ+LH HL+NE R Y LQAAIFQ
Sbjct: 351  D-TRTLRKPQYLMAPEIPLVLLSCEFEGLKFSCSSDAGQALHVHLENECRLYHLQAAIFQ 409

Query: 19   EGLLS 5
            E LLS
Sbjct: 410  EALLS 414


>ref|XP_004141002.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Cucumis sativus]
          Length = 455

 Score =  444 bits (1141), Expect = e-122
 Identities = 238/402 (59%), Positives = 285/402 (70%), Gaps = 1/402 (0%)
 Frame = -2

Query: 1204 QVANLQNQLKFLQNRVKELELENAKLSSQLSSCRCRKLVESVKKLNVGGVTIGSFPIKGC 1025
            Q+A+LQ+QL+ LQ+RVKELE +N+KLSS+L+SC C     S +++N G  +         
Sbjct: 33   QIASLQSQLRLLQDRVKELEEKNSKLSSRLASCCC-----SERRMNFGDRSRSI------ 81

Query: 1024 GDLRLGDAVGHEKSKDIDATKHIELIESTPGCALETTHHTSRRYVALKIMYFGPRFYGFA 845
                       EKSK+   TK  + +E T G       H S+RY+ALK+MYFG RFYGFA
Sbjct: 82   -----------EKSKESGTTKK-KSVEKTTGYNTRILDHCSKRYIALKVMYFGQRFYGFA 129

Query: 844  S-VQVEPTVESEIFKALEKTRLLVCDKKESQYTRCGRTDKGVSSVGQVISLFLRSKLEGP 668
            S  Q+EPTVESEIF+ALEK RLLV  +KES Y+RCGRTDKGVSSVGQVI+L+LRS L+ P
Sbjct: 130  SEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIALYLRSNLKDP 189

Query: 667  RVHGDCEEISPKNICEEIDYVRVLNAVLPKDIRVIGWCPVPHNFHARFSCLSREYKYLFW 488
                +      +    EIDYVRV+N VLP DIRV+GWC VP  F ARFSCL R+YKY FW
Sbjct: 190  PNGENSCHNGEEQHDGEIDYVRVINKVLPNDIRVLGWCSVPVGFSARFSCLRRKYKYFFW 249

Query: 487  RGNLDLLAMEVAGKKFVGQHDFRNFCKMDAANVHNYRRHVTXXXXXXXXXXSEGDELLAM 308
              NL++ AME AGKKFVG+HDFRNFCKMDAANVHNYRR +           +EG+ L A 
Sbjct: 250  GANLNISAMERAGKKFVGEHDFRNFCKMDAANVHNYRRRIMSFDISPCDVRTEGNPLWAF 309

Query: 307  TIKGSAFLWHQIRCMVAVLFMTGHGLEVPDVIDELLDINKTPRKPQYVMAPELPLILQSC 128
             I+GSAFLWHQ+RCMVAV+FM G  LE PDVID LLD  +TPRKPQYVMA E  L+L SC
Sbjct: 310  NIEGSAFLWHQVRCMVAVVFMVGQDLEDPDVIDILLDPLRTPRKPQYVMASENSLVLHSC 369

Query: 127  EFEGLKFNCSPDAGQSLHEHLKNEIRYYRLQAAIFQEGLLSC 2
            EFEG+KF CS DAG++L  HL NEIR Y+LQAAIF+E LLSC
Sbjct: 370  EFEGVKFWCSSDAGEALQLHLSNEIRTYKLQAAIFKEALLSC 411


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  434 bits (1115), Expect = e-119
 Identities = 232/392 (59%), Positives = 272/392 (69%), Gaps = 2/392 (0%)
 Frame = -2

Query: 1171 LQNRVKELELENAKLSSQLSSCRCRKLVESVKKLNVGGVTIGSFPIKGCGDLRLGDAVGH 992
            LQ R KELE ENAKL SQL+ CRC    E  KKL++                   D  G 
Sbjct: 14   LQARAKELEAENAKLLSQLADCRCH---EMEKKLHIP------------------DEKGR 52

Query: 991  EKSKDIDATKHIELIESTPGCALETTHHTSRRYVALKIMYFGPRFYGFAS-VQVEPTVES 815
            E  K     K  E IE  PG       H S+RYVALK+ YFG RFYGFAS  Q+EPTVES
Sbjct: 53   ESKKG--NRKSEEKIEKMPGYNTRFMSHHSKRYVALKVTYFGKRFYGFASEAQMEPTVES 110

Query: 814  EIFKALEKTRLLVCDKKESQYTRCGRTDKGVSSVGQVISLFLRSKLE-GPRVHGDCEEIS 638
            E+FKA EKTRLLV DKKESQY+RCGRTDKGVSSVGQVI+LFLRS L+     +G+   + 
Sbjct: 111  ELFKAFEKTRLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISATNNGNSGVVL 170

Query: 637  PKNICEEIDYVRVLNAVLPKDIRVIGWCPVPHNFHARFSCLSREYKYLFWRGNLDLLAME 458
             +    EIDYV VLN VLP DIR++GWCP P +FHARFSCLSREYKY FW+ NL++ A+E
Sbjct: 171  DEQHEGEIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIPAIE 230

Query: 457  VAGKKFVGQHDFRNFCKMDAANVHNYRRHVTXXXXXXXXXXSEGDELLAMTIKGSAFLWH 278
            VAG K VG+HDFRNFCKMDAANVHNYRR +T             ++L  + I+GSAFLWH
Sbjct: 231  VAGNKLVGEHDFRNFCKMDAANVHNYRRCITLFEISSTDVRYNDNQLWVIKIRGSAFLWH 290

Query: 277  QIRCMVAVLFMTGHGLEVPDVIDELLDINKTPRKPQYVMAPELPLILQSCEFEGLKFNCS 98
            Q+RCMVAVLFM G GLE P+VID LLD ++  RKPQY MA E+PL+LQSCEF+ +KF CS
Sbjct: 291  QVRCMVAVLFMVGKGLESPNVIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMCS 350

Query: 97   PDAGQSLHEHLKNEIRYYRLQAAIFQEGLLSC 2
             DAG++L  HL NE + Y+LQAAIF E LL+C
Sbjct: 351  SDAGEALRVHLVNECQIYQLQAAIFHEALLNC 382